mcur1 (LOC108268156,LOC108440645)


Basic Information

Item Value
gene id mcur1
gene name LOC108268156,LOC108440645
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047598.1
NCBI id CM018544.1
chromosome length 33267568
location 22345935 ~ 22354577 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026936139.2
GCCAGTGTGTACCCGGAAGTTGGAAACTCTCGAATGCGGGAGAAGTTTCAAGAGGATTTTAAATAGTGATATTTGAACACAAAACCACGTAAATAATGTTTCTGGGGCGTTTTAACAACGCGATTGTTTTGGACAGTTTTCAGGGCACgagtaaaaatatttcttatttgtttGACTTTGACAGAAGAGCAAACAGAGGCTACATGGCACGTTTACTCAGTGTTGTTACTCTGGGAGCAAACCGCTGGAGAGTGTACCCTGCTTTTAGCACAATATTAGTGTTAAGACATGGAAAGGGGAAAACGCTGCACACGGTTGCATTTCGACGGTCATGTGTTAAATGTGGGACGGACACTGGCTCGCTGTGGAAAGGTGTGCAATGGTCGCTGGTCAGAGAGTTGAGCACCTCCATTAAAGTGATGCAGTATGACTTGACTAGATCAGACCTTGCAAAATCTGGCCACAGAAAGCTTCTCTTTGATACACATGCAATGATCCAACTCCTGGAAGAGCGTGGGTTCACAATCCAGCAGGCTGAGGTTATTCTTAAAGTATTGCTCAATACAACCAACTCCTACATGGACATCATGTATAGTGATATGGTCACCAAGACTCAGCAAGAGATCATGTTACAGAAGGTTATGTCTCATATTGCAGCAGTAAAAAAAGACATGATCATTTTGGAGAAAAGTGAATTTTCCACATTACTGGCAGAGAACGAAAGAATTAAAGCAGAGCTTGCACAAGTGAAGATGCAGCTCTCTGATATGATGAATAAAGTACGCTTAGACAACAAGCTAGATGTGAACTTGGAAAAAAGCCAGGTGAAAGAGATGAAAGCAGAGCATGAAAAGAATATTTTGGAGGCCAGAAAACACATGATGGAGATGCTCGCTGAGCAGGACCGCCATGTGACTCAGAGTAATGTGAAGATCGACACAGAAGTGGCTGGCCTGAAAACCATGCTGGAATCTCACAAACTGGATAGTATCAAATATCTAGCAGGGTCAGTGTTCACGTGTCTCACAGTAGTACTTGGATTCTTTCGAATATGGATGTGAGTGCAGAGAAATCTCCATAAAACAATACCAAACATATCCCTCATGCAGACAACCACGAAATCCAGTGAAGAAATTCCTTATAAGCATCGTGTCACAGTACTGCTGCTTCTCAATCTGACATATAACAAGCCTGATCTGTCAGGTCCTGACATTCCTAATGAAGGCGCTCACTCCTTCTGCTTCACGTGAAGAAATCCTCTGCTGCtgagaacaattttttttgtatttttatttttattcctttttttttttttttttttttttttaaatatcttccACCGCAGTTTATTTGTGCAGGCACTTATTACCTTATTATCTGAAATGCACTTCATGTGACGTATTAAATGTTCTGTTATGGAAATACAGcgtgtgtcctgctgtctgtGGGTGGACAtgtaaatattgttattaaGTTTTATTATGTTAACTGAGTGTTCTAGCTAATATGTGAAGCTGTCACATAGCAGCACCAGTGGTATCTAACTTGTACGGATTTTTCAAATGACTGGATTGATGAAATGAAGTGACCAAAGACAAAAGCaatttttggattttattttttggatgACTTCCATAAGGGTTAATAATCTGAAATTAATATTTGCcctgaaataaatattaaaaa
>XM_026936140.2
CCAGTGTGTACCCGGAAGTTGGAAACTCTCGAATGCGGGAGAAGTTTCAAGAGGATTTTAAATAGTGATATTTGAACACAAAACCACAAGAGCAAACAGAGGCTACATGGCACGTTTACTCAGTGTTGTTACTCTGGGAGCAAACCGCTGGAGAGTGTACCCTGCTTTTAGCACAATATTAGTGTTAAGACATGGAAAGGGGAAAACGCTGCACACGGTTGCATTTCGACGGTCATGTGTTAAATGTGGGACGGACACTGGCTCGCTGTGGAAAGGTGTGCAATGGTCGCTGGTCAGAGAGTTGAGCACCTCCATTAAAGTGATGCAGTATGACTTGACTAGATCAGACCTTGCAAAATCTGGCCACAGAAAGCTTCTCTTTGATACACATGCAATGATCCAACTCCTGGAAGAGCGTGGGTTCACAATCCAGCAGGCTGAGGTTATTCTTAAAGTATTGCTCAATACAACCAACTCCTACATGGACATCATGTATAGTGATATGGTCACCAAGACTCAGCAAGAGATCATGTTACAGAAGGTTATGTCTCATATTGCAGCAGTAAAAAAAGACATGATCATTTTGGAGAAAAGTGAATTTTCCACATTACTGGCAGAGAACGAAAGAATTAAAGCAGAGCTTGCACAAGTGAAGATGCAGCTCTCTGATATGATGAATAAAGTACGCTTAGACAACAAGCTAGATGTGAACTTGGAAAAAAGCCAGGTGAAAGAGATGAAAGCAGAGCATGAAAAGAATATTTTGGAGGCCAGAAAACACATGATGGAGATGCTCGCTGAGCAGGACCGCCATGTGACTCAGAGTAATGTGAAGATCGACACAGAAGTGGCTGGCCTGAAAACCATGCTGGAATCTCACAAACTGGATAGTATCAAATATCTAGCAGGGTCAGTGTTCACGTGTCTCACAGTAGTACTTGGATTCTTTCGAATATGGATGTGAGTGCAGAGAAATCTCCATAAAACAATACCAAACATATCCCTCATGCAGACAACCACGAAATCCAGTGAAGAAATTCCTTATAAGCATCGTGTCACAGTACTGCTGCTTCTCAATCTGACATATAACAAGCCTGATCTGTCAGGTCCTGACATTCCTAATGAAGGCGCTCACTCCTTCTGCTTCACGTGAAGAAATCCTCTGCTGCtgagaacaattttttttgtatttttatttttattcctttttttttttttttttttttttttaaatatcttccACCGCAGTTTATTTGTGCAGGCACTTATTACCTTATTATCTGAAATGCACTTCATGTGACGTATTAAATGTTCTGTTATGGAAATACAGcgtgtgtcctgctgtctgtGGGTGGACAtgtaaatattgttattaaGTTTTATTATGTTAACTGAGTGTTCTAGCTAATATGTGAAGCTGTCACATAGCAGCACCAGTGGTATCTAACTTGTACGGATTTTTCAAATGACTGGATTGATGAAATGAAGTGACCAAAGACAAAAGCaatttttggattttattttttggatgACTTCCATAAGGGTTAATAATCTGAAATTAATATTTGCcctgaaataaatattaaaaataaaaaatatatatattaaaacgttgttattttgacttaatatctcatcTCGTTATTTCAAATGAGTAAGTTGTTATTTTGAATTGATATCTCAGTATTTCATAacacaatgtatttattttaactgaatatattgctattttgtattatttcatcatatattgttattttgagttatctctttttttttccttatttcaaGCTATTGTCATTTAACTCATAATTTTAATTGAATATCTTATTTCAAGTTATctcactgttgttgtttttttacatgatttctTTATTACGACTTAATATTTAACACCACACTGTCTATCAATAAGACTAATTTGTTGAATTTCCTGAggtgcaaataataataaaaaaaagtctttt

Function

NR:

description
mitochondrial calcium uniporter regulator 1

GO:

id name namespace
GO:0006099 tricarboxylic acid cycle biological_process
GO:0051287 NAD binding molecular_function
GO:0004449 isocitrate dehydrogenase (NAD+) activity molecular_function
GO:0000287 magnesium ion binding molecular_function

KEGG:

id description
K22137 MCUR1; mitochondrial calcium uniporter regulator 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026936139.2 False 1686 mRNA 0.40 9 22346313 22354577
XM_026936140.2 True 1967 mRNA 0.36 10 22345935 22354576

Neighbor

gene id symbol gene type direction distance location
dph2 dph2,LOC105920302 coding downstream 284 22338753 ~ 22345651 (-)
garem garem1 coding downstream 19127 22317465 ~ 22326808 (-)
chpf2 chpf2,LOC107724403,LOC107684493 coding downstream 93551 22245230 ~ 22252384 (-)
nsun6 nsun6 coding downstream 412342 21917213 ~ 21933593 (-)
hacd1 hacd1,LOC107702201,LOC107571282,LOC107568855 coding downstream 560560 21777876 ~ 21785375 (-)
rgs9bp LOC108268154,LOC103039154 coding upstream 3618 22358195 ~ 22361153 (-)
scrib scrib coding upstream 23110 22377687 ~ 22468044 (-)
puf60b puf60,puf60b,LOC108268151,LOC107742128,LOC107598708,LOC107659444 coding upstream 115642 22470219 ~ 22482144 (-)
ctnnd2b ctnnd2,ctnnd2b,LOC107746909,LOC107686039 coding upstream 191381 22545958 ~ 22627023 (-)
LOC113540005 NA coding upstream 299036 22653613 ~ 22662482 (-)
G68923 NA non-coding downstream 157172 22188183 ~ 22188763 (-)
G68907 NA non-coding downstream 171961 22170080 ~ 22173974 (-)
G68758 NA non-coding downstream 399698 21945612 ~ 21946237 (-)
G68752 NA non-coding downstream 499207 21846385 ~ 21846728 (-)
LOC117597088 NA non-coding downstream 502354 21840481 ~ 21843581 (-)
G69124 NA non-coding upstream 24718 22379295 ~ 22379533 (-)
G69128 NA non-coding upstream 55026 22409603 ~ 22452697 (-)
G69131 NA non-coding upstream 98645 22453222 ~ 22459488 (-)
G69139 NA non-coding upstream 151213 22505790 ~ 22512310 (-)
G69136 march6,LOC107664076,LOC107732575 non-coding upstream 161127 22515704 ~ 22519266 (-)
G68760 NA other downstream 410766 21934526 ~ 21935169 (-)
LOC113539989 LOC108436138 other downstream 974925 21354619 ~ 21371010 (-)
G68462 NA other downstream 1016685 21326046 ~ 21329250 (-)
chchd7 chchd7 other downstream 1032038 21304692 ~ 21313897 (-)
znf16l LOC108268318 other downstream 1520415 20778538 ~ 20825520 (-)
LOC113540019 LOC108268143 other upstream 275038 22629615 ~ 22636088 (-)
lrrcc1 lrrcc1 other upstream 937471 23292048 ~ 23306934 (-)
retreg1 fam134b other upstream 976439 23331016 ~ 23346573 (-)
LOC117597073 LOC108267227,LOC108267226 other upstream 1125388 23479965 ~ 23483850 (-)
G69592 LOC108267226,LOC108267227 other upstream 1138802 23493379 ~ 23493919 (-)

Expression


Co-expression Network