puf60b (puf60,puf60b,LOC108268151,LOC107742128,LOC107598708,LOC107659444)


Basic Information

Item Value
gene id puf60b
gene name puf60,puf60b,LOC108268151,LOC107742128,LOC107598708,LOC107659444
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047598.1
NCBI id CM018544.1
chromosome length 33267568
location 22470219 ~ 22482144 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026936188.2
CATTAGGAGGTGTGGACGCTAGGGGGCGCACTTCCTCTCCCCGCCACAGAGGCGCAGATCAGAGAAGAACTCAGGACACTGCGGCTTGTCACTACATGGCGGTAACGCAGCACATTGCGCTCTAGATTGCTGACAAATTGAGAGTGAGCGTTGTGTGCCGAAAACTTCCCCACCGCCATCTCAACCCTGGTCGCCTCAGTCAGTCGGAGCCTCGTAGAGAGGCAAATTTTTGATGATGGAGAATGGTCAAGGCACAGGCTCCAAGCTGGGCCTGCCACCCCTCACTCCAGAGCAGCAGGAGGCACTGCAGAGGGCGAAGAAATATGCTATGGAGCAGAGCATTAAGAGTGTCCTGGTGAAGCAAACCATAGCtcaccaacagcagcagcttacTAACCTGCAGATGGCAGCAGTGACTATGGGCTTTGGAGATCCTCTCTCACCCTTTCAATCGGTGGCAGCACAGAGGCAGCGAGCTCTCGCCATCATGTGTCGTGTCTATGTGGGTTCCATCTATTACGAGCTCGGTGAGGACACCATTCGGCAGGCTTTTGCCCCGTTCGGCCCAATCAAGAGCATCGACATGTCCTGGGACTCTGTCACCATGAAACACAAGGGCTTTGCCTTTGTGGAGTATGAGGTGCCTGAGGCTGCTCAGCTGGCTCTGGAGCAGATGAACTCTGTCATGCTGGGTGGAAGGAACATTAAGGTGGGGCGGCCAGGTAACATCGGACAGGCGCAGCCCATCATTGACCAGCTGGCAGAGGAGGCACGCGCATACAATCGCATTTATGTAGCCTCAGTGCACCCGGACCTGTCCGATGACGACATCAAGAGCGTCTTTGAGGCCTTCGGCAAGATTAAAGCCTGCATGCTGGCCCGAGAGCACACCACAGGGAAGCACAAAGGCTACTGCTTCATCGAATATGAAAAGCCTCAGTCAGCAATAGATGCAGTGTCCTCCATGAACCTGTTCGACCTGGGAGGCCAGTACCTGAGGGTGGGGAAGGCCGTGACTCCTCCCATGCCCCTGCTGACCCCGACGACCCCCGGAGGTTTGCCTCCTGCTGCGGCTGTGGCTGCTGCCGCTGCCACTGCTAAAATCACAGCCCAGGAGGCTGTCGCAGGGGCGTCTGTACTGGGCTCACTGGCGTCTCCCGCTCAGCTCCTCAGCCAGCAGATAGGACTCCCTCAGGCTGTACTGGCAGCGCAGGCCCCAGGCTTGATTACAGGTGTCACGCCCGTTCGGCCGACTCTGCCCGTGGTGCCTCAGGTGGGCCTGGTAAACCCCGTGCTGGCGTCGCCACCCATCACATCCAGTGCCACGTCCACAGGAACACCAACAAGCACAACTCAGCAGCAGCCCGAGGTTAAGAGGGAGGTACAGGACAAGCAGCAGGAGAAAGACGAAGCTCGAGCAGATGCCGCGGAGCAAAGGAGCGTGAATGAGCAGGAGCAGATCAGAAGCAGTGAGGGCAGCcccacagtcacacactcaggGTCTACAGTAATGGTGTTGCGCAACATGGTGGGCCCTGAAGACATAGACGATGACTTGGAGGGGGAGGTGACGGAGGAATGCGGAAAGTTTGGTGCCGTGAACCGGGTCATCATCTACCAGGAACGTCAGGGCGAGGAAGACGACGCCGAGATCATCGTTAAGATCTTCGTGGAGTTCTCTGACAGTGGTGAAATGAATAAGGCCATCCAGGCCCTGAACAACCGGTGGTTTGCGGGTCGTAAGGTCATGGCTGAAGTCTACGATCAGGAGCGTTTCAATAAAAGCGACCTTTCGGCATAAGACTGACCAACTCTCTGTCCACCTGCTCAAACTCATTCAGCCTCCATCTCTGCTGCTCGAGTTTTGGGATTCTTTTAAacttgtaattattttttttattgtggtcAATAATAATATTGGGGACAATCCCATTGGAGGGATTTGACTTAGAAAATATTTGTGCttaatggaattttttttttttttttgtcatcacctactgtgaaagatttttttctttgtttatttgcaAATTGTTTTCTAATTTGTCGATTTGGTTCCATTGTTCTCTTATGTTCTGACccccaaccttttttttttttttttttttttttttaaaaaaaccaaGTTTTTCCATCACTAATGTTCTGTTAAGATTCTAAACGTTGTACTGGAGTCATTGGTTCTGAATTTACTGAACAATAAATTCTTCAAATACGC
>XM_026936189.2
CATTAGGAGGTGTGGACGCTAGGGGGCGCACTTCCTCTCCCCGCCACAGAGGCGCAGATCAGAGAAGAACTCAGGACACTGCGGCTTGTCACTACATGGCGGTAACGCAGCACATTGCGCTCTAGATTGCTGACAAATTGAGAGTGAGCGTTGTGTGCCGAAAACTTCCCCACCGCCATCTCAACCCTGGTCGCCTCAGTCAGTCGGAGCCTCGTAGAGAGGCAAATTTTTGATGATGGAGAATGGTCAAGGCACAGGCTCCAAGCTGGGCCTGCCACCCCTCACTCCAGAGCAGCAGGAGGCACTGCAGAGGGCGAAGAAATATGCTATGGAGCAGAGCATTAAGAGTGTCCTGGTGAAGCAAACCATAGCtcaccaacagcagcagcttacTAACCTGCAGATGGCAGCAGTGACTATGGGCTTTGGAGATCCTCTCTCACCCTTTCAATCGGTGGCAGCACAGAGGCAGCGAGCTCTCGCCATCATGTGTCGTGTCTATGTGGGTTCCATCTATTACGAGCTCGGTGAGGACACCATTCGGCAGGCTTTTGCCCCGTTCGGCCCAATCAAGAGCATCGACATGTCCTGGGACTCTGTCACCATGAAACACAAGGGCTTTGCCTTTGTGGAGTATGAGGTGCCTGAGGCTGCTCAGCTGGCTCTGGAGCAGATGAACTCTGTCATGCTGGGTGGAAGGAACATTAAGGTGGGGCGGCCAGGTAACATCGGACAGGCGCAGCCCATCATTGACCAGCTGGCAGAGGAGGCACGCGCATACAATCGCATTTATGTAGCCTCAGTGCACCCGGACCTGTCCGATGACGACATCAAGAGCGTCTTTGAGGCCTTCGGCAAGATTAAAGCCTGCATGCTGGCCCGAGAGCACACCACAGGGAAGCACAAAGGCTACTGCTTCATCGAATATGAAAAGCCTCAGTCAGCAATAGATGCAGTGTCCTCCATGAACCTGTTCGACCTGGGAGGCCAGTACCTGAGGGTGGGGAAGGCCGTGACTCCTCCCATGCCCCTGCTGACCCCGACGACCCCCGGAGGTTTGCCTCCTGCTGCGGCTGTGGCTGCTGCCGCTGCCACTGCTAAAATCACAGCCCAGGCTGTCGCAGGGGCGTCTGTACTGGGCTCACTGGCGTCTCCCGCTCAGCTCCTCAGCCAGCAGATAGGACTCCCTCAGGCTGTACTGGCAGCGCAGGCCCCAGGCTTGATTACAGGTGTCACGCCCGTTCGGCCGACTCTGCCCGTGGTGCCTCAGGTGGGCCTGGTAAACCCCGTGCTGGCGTCGCCACCCATCACATCCAGTGCCACGTCCACAGGAACACCAACAAGCACAACTCAGCAGCAGCCCGAGGTTAAGAGGGAGGTACAGGACAAGCAGCAGGAGAAAGACGAAGCTCGAGCAGATGCCGCGGAGCAAAGGAGCGTGAATGAGCAGGAGCAGATCAGAAGCAGTGAGGGCAGCcccacagtcacacactcaggGTCTACAGTAATGGTGTTGCGCAACATGGTGGGCCCTGAAGACATAGACGATGACTTGGAGGGGGAGGTGACGGAGGAATGCGGAAAGTTTGGTGCCGTGAACCGGGTCATCATCTACCAGGAACGTCAGGGCGAGGAAGACGACGCCGAGATCATCGTTAAGATCTTCGTGGAGTTCTCTGACAGTGGTGAAATGAATAAGGCCATCCAGGCCCTGAACAACCGGTGGTTTGCGGGTCGTAAGGTCATGGCTGAAGTCTACGATCAGGAGCGTTTCAATAAAAGCGACCTTTCGGCATAAGACTGACCAACTCTCTGTCCACCTGCTCAAACTCATTCAGCCTCCATCTCTGCTGCTCGAGTTTTGGGATTCTTTTAAacttgtaattattttttttattgtggtcAATAATAATATTGGGGACAATCCCATTGGAGGGATTTGACTTAGAAAATATTTGTGCttaatggaattttttttttttttttgtcatcacctactgtgaaagatttttttctttgtttatttgcaAATTGTTTTCTAATTTGTCGATTTGGTTCCATTGTTCTCTTATGTTCTGACccccaaccttttttttttttttttttttttttttaaaaaaaccaaGTTTTTCCATCACTAATGTTCTGTTAAGATTCTAAACGTTGTACTGGAGTCATTGGTTCTGAATTTACTGAACAATAAATTCTTCAAATACGCCA
>XM_026936190.2
CATTAGGAGGTGTGGACGCTAGGGGGCGCACTTCCTCTCCCCGCCACAGAGGCGCAGATCAGAGAAGAACTCAGGACACTGCGGCTTGTCACTACATGGCGGTAACGCAGCACATTGCGCTCTAGATTGCTGACAAATTGAGAGTGAGCGTTGTGTGCCGAAAACTTCCCCACCGCCATCTCAACCCTGGTCGCCTCAGTCAGTCGGAGCCTCGTAGAGAGGCAAATTTTTGATGATGGAGAATGGTCAAGGCACAGGCTCCAAGCTGGGCCTGCCACCCCTCACTCCAGAGCAGCAGGAGGCACTGCAGAGGGCGAAGAAATATGCTATGGAGCAGAGCATTAAGAGTGTCCTGGTGAAGCAAACCATAGCtcaccaacagcagcagcttacTAACCTGCAGGTGGCAGCACAGAGGCAGCGAGCTCTCGCCATCATGTGTCGTGTCTATGTGGGTTCCATCTATTACGAGCTCGGTGAGGACACCATTCGGCAGGCTTTTGCCCCGTTCGGCCCAATCAAGAGCATCGACATGTCCTGGGACTCTGTCACCATGAAACACAAGGGCTTTGCCTTTGTGGAGTATGAGGTGCCTGAGGCTGCTCAGCTGGCTCTGGAGCAGATGAACTCTGTCATGCTGGGTGGAAGGAACATTAAGGTGGGGCGGCCAGGTAACATCGGACAGGCGCAGCCCATCATTGACCAGCTGGCAGAGGAGGCACGCGCATACAATCGCATTTATGTAGCCTCAGTGCACCCGGACCTGTCCGATGACGACATCAAGAGCGTCTTTGAGGCCTTCGGCAAGATTAAAGCCTGCATGCTGGCCCGAGAGCACACCACAGGGAAGCACAAAGGCTACTGCTTCATCGAATATGAAAAGCCTCAGTCAGCAATAGATGCAGTGTCCTCCATGAACCTGTTCGACCTGGGAGGCCAGTACCTGAGGGTGGGGAAGGCCGTGACTCCTCCCATGCCCCTGCTGACCCCGACGACCCCCGGAGGTTTGCCTCCTGCTGCGGCTGTGGCTGCTGCCGCTGCCACTGCTAAAATCACAGCCCAGGAGGCTGTCGCAGGGGCGTCTGTACTGGGCTCACTGGCGTCTCCCGCTCAGCTCCTCAGCCAGCAGATAGGACTCCCTCAGGCTGTACTGGCAGCGCAGGCCCCAGGCTTGATTACAGGTGTCACGCCCGTTCGGCCGACTCTGCCCGTGGTGCCTCAGGTGGGCCTGGTAAACCCCGTGCTGGCGTCGCCACCCATCACATCCAGTGCCACGTCCACAGGAACACCAACAAGCACAACTCAGCAGCAGCCCGAGGTTAAGAGGGAGGTACAGGACAAGCAGCAGGAGAAAGACGAAGCTCGAGCAGATGCCGCGGAGCAAAGGAGCGTGAATGAGCAGGAGCAGATCAGAAGCAGTGAGGGCAGCcccacagtcacacactcaggGTCTACAGTAATGGTGTTGCGCAACATGGTGGGCCCTGAAGACATAGACGATGACTTGGAGGGGGAGGTGACGGAGGAATGCGGAAAGTTTGGTGCCGTGAACCGGGTCATCATCTACCAGGAACGTCAGGGCGAGGAAGACGACGCCGAGATCATCGTTAAGATCTTCGTGGAGTTCTCTGACAGTGGTGAAATGAATAAGGCCATCCAGGCCCTGAACAACCGGTGGTTTGCGGGTCGTAAGGTCATGGCTGAAGTCTACGATCAGGAGCGTTTCAATAAAAGCGACCTTTCGGCATAAGACTGACCAACTCTCTGTCCACCTGCTCAAACTCATTCAGCCTCCATCTCTGCTGCTCGAGTTTTGGGATTCTTTTAAacttgtaattattttttttattgtggtcAATAATAATATTGGGGACAATCCCATTGGAGGGATTTGACTTAGAAAATATTTGTGCttaatggaattttttttttttttttgtcatcacctactgtgaaagatttttttctttgtttatttgcaAATTGTTTTCTAATTTGTCGATTTGGTTCCATTGTTCTCTTATGTTCTGACccccaaccttttttttttttttttttttttttttaaaaaaaccaaGTTTTTCCATCACTAATGTTCTGTTAAGATTCTAAACGTTGTACTGGAGTCATTGGTTCTGAATTTACTGAACAATAAATTCTTCAAATACGC
>XM_034303630.1
GCGAAGAAATATGCTATGGAGCAGAGCATTAAGAGTGTCCTGGTGAAGCAAACCATAGCtcaccaacagcagcagcttacTAACCTGCAGATGGCAGCAGTGACTATGGGCTTTGGAGATCCTCTCTCACCCTTTCAATCGGTCAATAGAATATTAAactatttctttctctgtgcGCATTTTTGATACTATGATTTTTGGTGCTATGAGTGAGTGACATACCAGGCCAGATATACAAAGCTGATGACCAGACATTTGTCTCAGCATATTTCAAAAGTAGACATGGCTTTTTCTGGGGTTTACTTGTGCGGCGAATGATATGTGTATGTGGTTGGTCACTCATTTCATCacaggttgccaggtctcaCAAGGCTTTTACAACTTTTAGATTTTGCAGTACTGTAGATTGTATTTGGGCCCAAGTGTGTAGGTGAGAGAAGGACTTGGAGGAATTTGTCAAGGATATTTCTCTAGCCCAGGTCTATTTTTCATCACCACCCTTTAAAATGTATCATCAGCTCTTACTGTGATCACATTCCAGTGATCATTAACACATATAGACTCCATGTGCAAggagcatttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttgtgtgctggGGATGTTGCAAATCCATGTCTCCTTTGTAAATATGCTGTGAACTATCAGAGCCAGCTTGGTGGGATGTATAAGAAGGCTAGCCAAGAAAAAGCACCcagcagccaaaaaaaaaaaaaagtcacgtAGGTTTATTTAGGTAGGGAAACATTCCTAACGTATGTAATTGAAGGAAAAACAACCCTGTGTACATTAATTATTAGGTTATGTGGTTTGTGCAGATTCGCCCTTCCTCTTGGAGAATTCCAGCGTAAGTCCAAAAGCCACCAAAGGAGGCACCTCAGGTTTCAGCTCATAATTGTGGTTTTGATGGTATGGTTTTGTTGAAATTGTCTTGTTGGAATCTTTGCACTCCAGGTTAGTCATAACTGTACATGTTTTGAAATGTGTGCTGTGCAGGCTCAAAGTAAAACCCCTGAGCTCACTGTTAAACAGAAGGGCTTCTCTGCATCTACTCTAACTCCCTGGCATTTATGCTTAAGTTGTGGCAGCACAGAGGCAGCGAGCTCTCGCCATCATGTGTCGTGTCTATGTGGGTTCCATCTATTACGAGCTCGGTGAGGACACCATTCGGCAGGCTTTTGCCCCGTTCGGCCCAATCAAGAGCATCGACATGTCCTGGGACTCTGTCACCATGAAACACAAGGGCTTTGCCTTTGTGGAGTATGAGGTGCCTGAGGCTGCTCAGCTGGCTCTGGAGCAGATGAACTCTGTCATGCTGGGTGGAAGGAACATTAAGGTGGGGCGGCCAGGTAACATCGGACAGGCGCAGCCCATCATTGACCAGCTGGCAGAGGAGGCACGCGCATACAATCGCATTTATGTAGCCTCAGTGCACCCGGACCTGTCCGATGACGACATCAAGAGCGTCTTTGAGGCCTTCGGCAAGATTAAAGCCTGCATGCTGGCCCGAGAGCACACCACAGGGAAGCACAAAGGCTACTGCTTCATCGAATATGAAAAGCCTCAGTCAGCAATAGATGCAGTGTCCTCCATGAACCTGTTCGACCTGGGAGGCCAGTACCTGAGGGTGGGGAAGGCCGTGACTCCTCCCATGCCCCTGCTGACCCCGACGACCCCCGGAGGTTTGCCTCCTGCTGCGGCTGTGGCTGCTGCCGCTGCCACTGCTAAAATCACAGCCCAGGAGGCTGTCGCAGGGGCGTCTGTACTGGGCTCACTGGCGTCTCCCGCTCAGCTCCTCAGCCAGCAGATAGGACTCCCTCAGGCTGTACTGGCAGCGCAGGCCCCAGGCTTGATTACAGGTGTCACGCCCGTTCGGCCGACTCTGCCCGTGGTGCCTCAGGTGGGCCTGGTAAACCCCGTGCTGGCGTCGCCACCCATCACATCCAGTGCCACGTCCACAGGAACACCAACAAGCACAACTCAGCAGCAGCCCGAGGTTAAGAGGGAGGTACAGGACAAGCAGCAGGAGAAAGACGAAGCTCGAGCAGATGCCGCGGAGCAAAGGAGCGTGAATGAGCAGGAGCAGATCAGAAGCAGTGAGGGCAGCcccacagtcacacactcaggGTCTACAGTAATGGTGTTGCGCAACATGGTGGGCCCTGAAGACATAGACGATGACTTGGAGGGGGAGGTGACGGAGGAATGCGGAAAGTTTGGTGCCGTGAACCGGGTCATCATCTACCAGGAACGTCAGGGCGAGGAAGACGACGCCGAGATCATCGTTAAGATCTTCGTGGAGTTCTCTGACAGTGGTGAAATGAATAAGGCCATCCAGGCCCTGAACAACCGGTGGTTTGCGGGTCGTAAGGTCATGGCTGAAGTCTACGATCAGGAGCGTTTCAATAAAAGCGACCTTTCGGCATAAGACTGACCAACTCTCTGTCCACCTGCTCAAACTCATTCAGCCTCCATCTCTGCTGCTCGAGTTTTGGGATTCTTTTAAacttgtaattattttttttattgtggtcAATAATAATATTGGGGACAATCCCATTGGAGGGATTTGACTTAGAAAATATTTGTGCttaatggaattttttttttttttttgtcatcacctactgtgaaagatttttttctttgtttatttgcaAATTGTTTTCTAATTTGTCGATTTGGTTCCATTGTTCTCTTATGTTCTGACccccaaccttttttttttttttttttttttttttaaaaaaaccaaGTTTTTCCATCACTAATGTTCTGTTAAGATTCTAAACGTTGTACTGGAGTCATTGGTTCTGAATTTACTGAACAATAAATTCTTCAAATACGC
>XM_034303631.1
GCGAAGAAATATGCTATGGAGCAGAGCATTAAGAGTGTCCTGGTGAAGCAAACCATAGCtcaccaacagcagcagcttacTAACCTGCAGATGGCAGCAGTGACTATGGGCTTTGGAGATCCTCTCTCACCCTTTCAATCGGTCAATAGAATATTAAactatttctttctctgtgcGCATTTTTGATACTATGATTTTTGGTGCTATGAGTGAGTGACATACCAGGCCAGATATACAAAGCTGATGACCAGACATTTGTCTCAGCATATTTCAAAAGTAGACATGGCTTTTTCTGGGGTTTACTTGTGCGGCGAATGATATGTGTATGTGGTTGGTCACTCATTTCATCacaggttgccaggtctcaCAAGGCTTTTACAACTTTTAGATTTTGCAGTACTGTAGATTGTATTTGGGCCCAAGTGTGTAGGTGAGAGAAGGACTTGGAGGAATTTGTCAAGGATATTTCTCTAGCCCAGGTCTATTTTTCATCACCACCCTTTAAAATGTATCATCAGCTCTTACTGTGATCACATTCCAGTGATCATTAACACATATAGACTCCATGTGCAAggagcatttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttgtgtgctggGGATGTTGCAAATCCATGTCTCCTTTGTAAATATGCTGTGAACTATCAGAGCCAGCTTGGTGGGATGTATAAGAAGGCTAGCCAAGAAAAAGCACCcagcagccaaaaaaaaaaaaaagtcacgtAGGTTTATTTAGGTAGGGAAACATTCCTAACGTATGTAATTGAAGGAAAAACAACCCTGTGTACATTAATTATTAGGTTATGTGGTTTGTGCAGATTCGCCCTTCCTCTTGGAGAATTCCAGCGTAAGTCCAAAAGCCACCAAAGGAGGCACCTCAGGTTTCAGCTCATAATTGTGGTTTTGATGGCTCAAAGTAAAACCCCTGAGCTCACTGTTAAACAGAAGGGCTTCTCTGCATCTACTCTAACTCCCTGGCATTTATGCTTAAGTTGTGGCAGCACAGAGGCAGCGAGCTCTCGCCATCATGTGTCGTGTCTATGTGGGTTCCATCTATTACGAGCTCGGTGAGGACACCATTCGGCAGGCTTTTGCCCCGTTCGGCCCAATCAAGAGCATCGACATGTCCTGGGACTCTGTCACCATGAAACACAAGGGCTTTGCCTTTGTGGAGTATGAGGTGCCTGAGGCTGCTCAGCTGGCTCTGGAGCAGATGAACTCTGTCATGCTGGGTGGAAGGAACATTAAGGTGGGGCGGCCAGGTAACATCGGACAGGCGCAGCCCATCATTGACCAGCTGGCAGAGGAGGCACGCGCATACAATCGCATTTATGTAGCCTCAGTGCACCCGGACCTGTCCGATGACGACATCAAGAGCGTCTTTGAGGCCTTCGGCAAGATTAAAGCCTGCATGCTGGCCCGAGAGCACACCACAGGGAAGCACAAAGGCTACTGCTTCATCGAATATGAAAAGCCTCAGTCAGCAATAGATGCAGTGTCCTCCATGAACCTGTTCGACCTGGGAGGCCAGTACCTGAGGGTGGGGAAGGCCGTGACTCCTCCCATGCCCCTGCTGACCCCGACGACCCCCGGAGGTTTGCCTCCTGCTGCGGCTGTGGCTGCTGCCGCTGCCACTGCTAAAATCACAGCCCAGGAGGCTGTCGCAGGGGCGTCTGTACTGGGCTCACTGGCGTCTCCCGCTCAGCTCCTCAGCCAGCAGATAGGACTCCCTCAGGCTGTACTGGCAGCGCAGGCCCCAGGCTTGATTACAGGTGTCACGCCCGTTCGGCCGACTCTGCCCGTGGTGCCTCAGGTGGGCCTGGTAAACCCCGTGCTGGCGTCGCCACCCATCACATCCAGTGCCACGTCCACAGGAACACCAACAAGCACAACTCAGCAGCAGCCCGAGGTTAAGAGGGAGGTACAGGACAAGCAGCAGGAGAAAGACGAAGCTCGAGCAGATGCCGCGGAGCAAAGGAGCGTGAATGAGCAGGAGCAGATCAGAAGCAGTGAGGGCAGCcccacagtcacacactcaggGTCTACAGTAATGGTGTTGCGCAACATGGTGGGCCCTGAAGACATAGACGATGACTTGGAGGGGGAGGTGACGGAGGAATGCGGAAAGTTTGGTGCCGTGAACCGGGTCATCATCTACCAGGAACGTCAGGGCGAGGAAGACGACGCCGAGATCATCGTTAAGATCTTCGTGGAGTTCTCTGACAGTGGTGAAATGAATAAGGCCATCCAGGCCCTGAACAACCGGTGGTTTGCGGGTCGTAAGGTCATGGCTGAAGTCTACGATCAGGAGCGTTTCAATAAAAGCGACCTTTCGGCATAAGACTGACCAACTCTCTGTCCACCTGCTCAAACTCATTCAGCCTCCATCTCTGCTGCTCGAGTTTTGGGATTCTTTTAAacttgtaattattttttttattgtggtcAATAATAATATTGGGGACAATCCCATTGGAGGGATTTGACTTAGAAAATATTTGTGCttaatggaattttttttttttttttgtcatcacctactgtgaaagatttttttctttgtttatttgcaAATTGTTTTCTAATTTGTCGATTTGGTTCCATTGTTCTCTTATGTTCTGACccccaaccttttttttttttttttttttttttttaaaaaaaccaaGTTTTTCCATCACTAATGTTCTGTTAAGATTCTAAACGTTGTACTGGAGTCATTGGTTCTGAATTTACTGAACAATAAATTCTTCAAATACGC

Function

symbol description
puf60b Predicted to enable DNA binding activity and RNA binding activity. Predicted to be involved in alternative mRNA splicing, via spliceosome; mRNA splice site selection; and regulation of alternative mRNA splicing, via spliceosome. Predicted to act upstream of or within RNA splicing; apoptotic process; and mRNA processing. Predicted to be located in nucleus. Is expressed in endocrine system; nervous system; pectoral fin; pharynx; and somite. Orthologous to human PUF60 (poly(U) binding splicing factor 60).
puf60 Enables identical protein binding activity. Predicted to be involved in alternative mRNA splicing, via spliceosome; mRNA splice site selection; and regulation of alternative mRNA splicing, via spliceosome. Located in cell junction and nucleoplasm.

NR:

description
PREDICTED: poly(U)-binding-splicing factor PUF60-B-like isoform X3

GO:

id name namespace
GO:0006915 apoptotic process biological_process
GO:0006355 regulation of transcription, DNA-templated biological_process
GO:0006397 mRNA processing biological_process
GO:0008380 RNA splicing biological_process
GO:0005634 nucleus cellular_component
GO:0003676 nucleic acid binding molecular_function
GO:0003677 DNA binding molecular_function
GO:0000166 nucleotide binding molecular_function
GO:0003723 RNA binding molecular_function

KEGG:

id description
K12838 PUF60; poly(U)-binding-splicing factor PUF60

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026936188.2 False 2221 mRNA 0.52 12 22470221 22482144
XM_026936189.2 False 2220 mRNA 0.52 12 22470219 22482144
XM_026936190.2 False 2170 mRNA 0.52 11 22470221 22482144
XM_034303630.1 True 2875 mRNA 0.48 9 22470221 22479106
XM_034303631.1 False 2788 mRNA 0.48 10 22470221 22479106

Neighbor

gene id symbol gene type direction distance location
scrib scrib coding downstream 2175 22377687 ~ 22468044 (-)
rgs9bp LOC108268154,LOC103039154 coding downstream 109066 22358195 ~ 22361153 (-)
mcur1 LOC108268156,LOC108440645 coding downstream 115642 22345935 ~ 22354577 (-)
dph2 dph2,LOC105920302 coding downstream 124568 22338753 ~ 22345651 (-)
garem garem1 coding downstream 143411 22317465 ~ 22326808 (-)
ctnnd2b ctnnd2,ctnnd2b,LOC107746909,LOC107686039 coding upstream 63814 22545958 ~ 22627023 (-)
LOC113540005 NA coding upstream 171469 22653613 ~ 22662482 (-)
rgs20 rgs20,LOC108440656,LOC107584260,LOC107746905,LOC107686043,LOC107664043 coding upstream 197045 22679189 ~ 22701151 (-)
emilin2a LOC108268130 coding upstream 355883 22838027 ~ 22851158 (-)
adcyap1b LOC100304507 coding upstream 504517 22986661 ~ 22990616 (-)
G69131 NA non-coding downstream 10731 22453222 ~ 22459488 (-)
G69128 NA non-coding downstream 17522 22409603 ~ 22452697 (-)
G69124 NA non-coding downstream 90686 22379295 ~ 22379533 (-)
G68923 NA non-coding downstream 281456 22188183 ~ 22188763 (-)
G68907 NA non-coding downstream 296245 22170080 ~ 22173974 (-)
G69139 NA non-coding upstream 23646 22505790 ~ 22512310 (-)
G69136 march6,LOC107664076,LOC107732575 non-coding upstream 33560 22515704 ~ 22519266 (-)
G69183 NA non-coding upstream 167795 22649939 ~ 22652446 (-)
G69203 NA non-coding upstream 195232 22677376 ~ 22677918 (-)
G69233 NA non-coding upstream 289242 22771386 ~ 22772012 (-)
G68760 NA other downstream 535050 21934526 ~ 21935169 (-)
LOC113539989 LOC108436138 other downstream 1099209 21354619 ~ 21371010 (-)
G68462 NA other downstream 1140969 21326046 ~ 21329250 (-)
chchd7 chchd7 other downstream 1156322 21304692 ~ 21313897 (-)
znf16l LOC108268318 other downstream 1644699 20778538 ~ 20825520 (-)
LOC113540019 LOC108268143 other upstream 147471 22629615 ~ 22636088 (-)
lrrcc1 lrrcc1 other upstream 809904 23292048 ~ 23306934 (-)
retreg1 fam134b other upstream 848872 23331016 ~ 23346573 (-)
LOC117597073 LOC108267227,LOC108267226 other upstream 997821 23479965 ~ 23483850 (-)
G69592 LOC108267226,LOC108267227 other upstream 1011235 23493379 ~ 23493919 (-)

Expression


Co-expression Network