zzz3 (zzz3,LOC104950552)


Basic Information

Item Value
gene id zzz3
gene name zzz3,LOC104950552
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047598.1
NCBI id CM018544.1
chromosome length 33267568
location 29131186 ~ 29147492 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026936482.2
TGTCGGAAAACGGGTGGGAAAGAAAAGTATCGCAGTCTGGAcagaaaaacatggctgccgcCCAGTGCGCAGCAAACCATTTGCGGAAATGAGgtgCCCGTATTCTGCCGCAGAGGAGAGCACCACGATGAGGAGTCAGTAGGCACCCTCCATAGTATGGCCGCGTCCCGTTCTTCGCGTGTCACAAGATCATCAGTGGGGTTAAATGGATTGGACGAGAACTTTTGTGGCCGAACCCTCAGGAACCGCAGCATTGCACAGCCGGAGGAGACCTCGCCTCCTCCCACACCCAGAACTCGCTTGCCCTCGAAGAAGCAGGACTGCCAGCAGAACCAGCAGGCCGGGACTCAATCGGGGAAGGTAGCTGAAGGAGAGTCCTTGCCTACCCACAGGAAACGgggcctgtctgtctctgagaAGGACGAGCCGGAGAAATCGGACGCCTCTGAAAGAGTTCGAGCTGGGGGAGGACAAGAAGCCTCCCCTTCCCAGAAGAGGGCTAAGCGGTGCTCTTGCTCAGGGGAATCCCAAGGAACTGAGGAGGAACCTTCTCCCAAACCTGAGAGCCCTGATCCGGCTGCAGCCAAGGGCAACGATGAGGACTCTAAATCGGACTTTGCTTCAAACTCGCCCTCGGATTCGGGCTTGGCGCTGTCTGTCAGCCTCGACAAAGAGTGCGAGGAGGAAAAGGACGAGGACAAGAAGGAACGCGGTCCTTCTTTGCCAGCCAGCGAATCCCACAAGGCGACCAATGGCCTGGCTGAGGTCCATAAGGATGACTTAGAATCTGCAGCCTTGCCTGCAGAGCCCTGTGCCTGCCCTACCACGCTCACGAACAGTCCCTCGCTGCCCAATGGCAGCCAGGTGGCAGCTTCAACCCTGGACCCCATTGTGCCTTGTACATCTCCGCTTCTTAAACAGGTGGACGAGTCCAATGGCCTTCAGGCCGACAGAGAGAGGAACTGCTCAGCTGAAGAGGCCTCTGAAGCTGTTCTGTCTCTGGAACCGGAGGTCGAGGTTGAAGTAGACGTGGTCGGGGACACTGGCCAGGTCCAGGACGAGCACGTGGCTGAGGAGAGCATTAACGGTGGCCTGCTTGTGGATCTGCAAGACCCTTCAGACGATTGCTCAAATATCTCAGGGGAAACAGCAGGGCTGACCTCCCAGCTTCCCGCGGAGCCGCCTTCCTTCACGGAGCCTCAAGAGCATAGATACACCTTGAGGACTTCCCCTCGCCGCACTTCCTGTGTTAGTGGGCCAAGATGCAGCTCCCCCAAGCCTGGTTCCCCCCACGCGGATAACGGATTACTGAAGGAGGAGGTTGCGGTGGTTCCTCTTGACTTGGATGACTCGGCCTGCCATAAAGAACCTCCGACTGACAGGCCGAGTCTTGTTAGCGAGGCAGACAGCGAACTCTCTGAACACATAGGGGCCAAGGTCAGTGAAGATACTGGCCTGTTGGATAGTAGAGGTTCCAGATCCACCAAAGAGCCATCAGTCGGGCAGGCCGAGGAGGAAGAGGTGGAGGAGGACGATCCTGATGTCTACTATTTCGAATCTGATCACTTGGCTCTCAAACACAACAAAGACTATCAGAGACTGCTCCAGACCATCGGCGTATTGGAGGCCCAGAGAAATCGGGCCATCCTGGATCTGGAGGCACTGACTCGCCACCAGAAGCAGGCCCTGGCCAACCCCATTGCCTTCGTGGACCAGCTTCAGAAACAGgTGGAGTTGGGCTTGCCCTGTCCGCAGAGAGTCGTCCAGCTCCCCGAAATCGCATGGGACCAATACACCTCAGGCCGCAGTGAATTCGAAAGGGACTTTTGTGACAAGAAGCGCAAGACAAGGCGGTTGAAGTTAATCTTCGACAAAGTGGGCTTACCGGCAAGACCAAAAAGTCCGACCGATTCCAAGAAGGAGAGCGACGTCTCGGCTCTGTACTCGTCTCTGCCTTCCAGCGACGCCCCGGAACACGGCACGCTCGGAAACAGGACACAGatgatcAGAGGGAGACCGTATCACCAGAACAAACCAGACACGTTTAACCAGCTGTGGACGGTGGAGGAGCAGAAAAAGCTGGAGCAGCTTCTCCTCAAGTTCCCCCCTGAGGAGGTGGAGTCTAAACGATGGCAGAAGATCGCAGACGAGCTGGGGAACAGGACGGCCAAACAGGTCGCCAGTCGAGTGCAAAAGTATTTCATTAAACTGACAAAGGCGGGAATTCCAGTCCCAGGGCGAACTCCAAACCTGTGCATGTACAGCAAAAAGaccTCGAATAAGAGGCAGCACCacctgaacaagcacctgtacCGGCCGTCCACCTTCCTCACGTCCTACGAGCCGCCCGTCTACATGGAGGACGAGGACGAGCGCTCGAGCTTCATCAGCAGCCTGCAGGACGGCGCGGCCCACGATTCGGATGAGGATGGTGTCCCGGTGGAGCTGAGGCACCTGCCAGAGTACAAAGAGCTACAGGAGCTGAAAAGACTCAGGAAGCAGAAGATCCACGAGCTCCAGAGCGAGAGCACCCTCACACAGCACATAGGCTACaagTGTGATATGTGTGGCGTCGAGCCAATCCAGGGCGTGCGGTGGCACTGCCAGGACTGCCCGCAGGACAGTGCCGTCGACTTCTGCGCCAACTGCGCCGACTGTGCGTTTaagacggacacacacacgccgAGTCACCGCCTGGAGCCGGTCCAGCAGGCCGAGAGCTTCCTGGACAGAGACTACTGCCTGCCTGCGAGCGCCGCCTACAACTACCTGGACCCCAACTACTTCCCGGCCAACAGATGACAGGAGCGAGGCAGGGCCGCTCGAACCCGGGGCCGGACTCGCTTCGTCCACTCACCAGAGGCAGATCCGCTTACAGCAGGAGGACCCTGAACCACCGCTCTGCTCGAGCTCACACGCCATCTTCAACGCAAAAGGGAGGGAGCAACGTCCCAGATCGTCTCCACTCCCTTTCACCTAGCTGCTGTCAGgccttcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagagggtggaGATGAAAAGGGACTCGGTGCTGACTTTCCATTCACGCCAGGTTTTTAACCAGGAGGATTTGCTAACAAATCAGACGTTCTTAATTTACagaccctgaacacacacttttactagaagctgcttgtttttgtttttgttttttttttttccctcccttcTCACACGCCCAGACCTTACATCATGATGTCGAtcatgtttttgatcattttgatatatatatatattttttttatgttaaagcTCCAGCCCATGAAGCACTACAGCACGGAAAAGACCAGCTGAGAGACGCACTTGGTAGGTGTGAATAGCGTATGGGGTGtcgttttctttctctctctgtctttctctctcccgcTCTCCCTCTCATCCCTTCTTCTCGGTGTGTACTGTCGTCGATCATGTGAAGTATACAAACGTACGGTGAATCTAGCCAGTGGTAGGTGCTGTGCCATTTTTTGTTCTTCCATTCttccattcttcttctttttttttttttttttttttttttttttttttttttttttaaagcgtcCGGATGATTCCATGTCACTcgttttaggaaaaaaagaaaaagaaaggaaaaaaatgaaatggtggGAAAATCTGCCCAATCatcacacttcattttttttttccccccctgcCTCATggtccatgaaaaaaaaagtgtatttttattaatctatttaaaCGGCAATGATGCCAGAAAAGATGATATGGAGGTGGTGGCCGTCGTCGTCGCTGCAGCGCTCCACCCGTtgttattttatacacacagattTTGTTGTGCTTTCACGTAGACCATTTTGTATTGGATTTAGTTTTGTCCCtcccccctttctctctttttgccCTCCCTTCCCCTCCCTTCCCCTCCCCTGCTTCAATATCAGTGTATAACAGTCTGTTCTTAAATAATGTTCACATGTTAGAGGAGAACTGTGGAAATAAAAGTATGTGAAAAGTCTTTCTACACCA
>XM_026936483.2
gAATTATTCCCTCACGGTTTTGCGCGTGTATATATCTTAAGATGAGgctaaatgcattaaatattaaacaaacccACTGGACTGCTAAGTCCACGGTGCGCGTGAAATGCTGGAGGGAAAAGTTGTCGCGCTAAACAATTAGCTAGCGTTAGCTTAGCGGTTAGCGCTTAGCACTTAGCGTGCTAGCATAAGCAAGCCGAAACAACAGTTAGCCAAATAGGTATGCCGCGTTTTAGACGAATAACTAGGTGTAACGTttaatttatagattttttgTTTGACTCGCTACCAAATGACGTTTTTATATAGCTAGCTAGTCCAGTGCTAGTTAACGTGTGTTAGCCGGTTATGCTAAATCGAGTTTGTGCGGATCCAGaagctttttttccttccctctcCTCCGCAAAGCGCGGATTCAGTCTCAAATCCTCGCGTGCGCAGTGCACAAGCGCACTATCCCAGGGTGTGAATGAACGGCACGTGcgccctacgtagtgcactacacGACAAATCGGAGCGTATTTTGGGACCGAGCCCGCTAACTAGCCTTGCAACTTGCTCAGCTAACTTCTCATGAATGACAACGGAGCGTTGTAATTTTGGTTAGACTAGCTAACGccttttatatattatattttaaattaaataaaatttgcattgttatttTCATGTAAGCTGTGTCACGGAATGAAATCATTTTGTGcgtttgtagtgttttttttccgtTGTCAATGCGGTTGCTAGTTTAGCAGGTCGTGAGGTGTTAGCTAGCAACACGtttgtttttgttcactttAGCCGGAGGGTTGAAGCgttaaatgtttattcagtgaggtttatatgttttaatgtgtgttaattatgaagtgaagtgagtgCTCGTCTCGTAAGTGGGGTTCTGAGCTCTAAAAACCcggcttacacacacacacacacacacacacagagcacaaggGGCCTGATGAATGATAAACCAGGAGACTCTTCTGTTTTTGCACAGTGAAATGATTTCCTAGTCAGGAATAAAGgtgCCCGTATTCTGCCGCAGAGGAGAGCACCACGATGAGGAGTCAGTAGGCACCCTCCATAGTATGGCCGCGTCCCGTTCTTCGCGTGTCACAAGATCATCAGTGGGGTTAAATGGATTGGACGAGAACTTTTGTGGCCGAACCCTCAGGAACCGCAGCATTGCACAGCCGGAGGAGACCTCGCCTCCTCCCACACCCAGAACTCGCTTGCCCTCGAAGAAGCAGGACTGCCAGCAGAACCAGCAGGCCGGGACTCAATCGGGGAAGGTAGCTGAAGGAGAGTCCTTGCCTACCCACAGGAAACGgggcctgtctgtctctgagaAGGACGAGCCGGAGAAATCGGACGCCTCTGAAAGAGTTCGAGCTGGGGGAGGACAAGAAGCCTCCCCTTCCCAGAAGAGGGCTAAGCGGTGCTCTTGCTCAGGGGAATCCCAAGGAACTGAGGAGGAACCTTCTCCCAAACCTGAGAGCCCTGATCCGGCTGCAGCCAAGGGCAACGATGAGGACTCTAAATCGGACTTTGCTTCAAACTCGCCCTCGGATTCGGGCTTGGCGCTGTCTGTCAGCCTCGACAAAGAGTGCGAGGAGGAAAAGGACGAGGACAAGAAGGAACGCGGTCCTTCTTTGCCAGCCAGCGAATCCCACAAGGCGACCAATGGCCTGGCTGAGGTCCATAAGGATGACTTAGAATCTGCAGCCTTGCCTGCAGAGCCCTGTGCCTGCCCTACCACGCTCACGAACAGTCCCTCGCTGCCCAATGGCAGCCAGGTGGCAGCTTCAACCCTGGACCCCATTGTGCCTTGTACATCTCCGCTTCTTAAACAGGTGGACGAGTCCAATGGCCTTCAGGCCGACAGAGAGAGGAACTGCTCAGCTGAAGAGGCCTCTGAAGCTGTTCTGTCTCTGGAACCGGAGGTCGAGGTTGAAGTAGACGTGGTCGGGGACACTGGCCAGGTCCAGGACGAGCACGTGGCTGAGGAGAGCATTAACGGTGGCCTGCTTGTGGATCTGCAAGACCCTTCAGACGATTGCTCAAATATCTCAGGGGAAACAGCAGGGCTGACCTCCCAGCTTCCCGCGGAGCCGCCTTCCTTCACGGAGCCTCAAGAGCATAGATACACCTTGAGGACTTCCCCTCGCCGCACTTCCTGTGTTAGTGGGCCAAGATGCAGCTCCCCCAAGCCTGGTTCCCCCCACGCGGATAACGGATTACTGAAGGAGGAGGTTGCGGTGGTTCCTCTTGACTTGGATGACTCGGCCTGCCATAAAGAACCTCCGACTGACAGGCCGAGTCTTGTTAGCGAGGCAGACAGCGAACTCTCTGAACACATAGGGGCCAAGGTCAGTGAAGATACTGGCCTGTTGGATAGTAGAGGTTCCAGATCCACCAAAGAGCCATCAGTCGGGCAGGCCGAGGAGGAAGAGGTGGAGGAGGACGATCCTGATGTCTACTATTTCGAATCTGATCACTTGGCTCTCAAACACAACAAAGACTATCAGAGACTGCTCCAGACCATCGGCGTATTGGAGGCCCAGAGAAATCGGGCCATCCTGGATCTGGAGGCACTGACTCGCCACCAGAAGCAGGCCCTGGCCAACCCCATTGCCTTCGTGGACCAGCTTCAGAAACAGgTGGAGTTGGGCTTGCCCTGTCCGCAGAGAGTCGTCCAGCTCCCCGAAATCGCATGGGACCAATACACCTCAGGCCGCAGTGAATTCGAAAGGGACTTTTGTGACAAGAAGCGCAAGACAAGGCGGTTGAAGTTAATCTTCGACAAAGTGGGCTTACCGGCAAGACCAAAAAGTCCGACCGATTCCAAGAAGGAGAGCGACGTCTCGGCTCTGTACTCGTCTCTGCCTTCCAGCGACGCCCCGGAACACGGCACGCTCGGAAACAGGACACAGatgatcAGAGGGAGACCGTATCACCAGAACAAACCAGACACGTTTAACCAGCTGTGGACGGTGGAGGAGCAGAAAAAGCTGGAGCAGCTTCTCCTCAAGTTCCCCCCTGAGGAGGTGGAGTCTAAACGATGGCAGAAGATCGCAGACGAGCTGGGGAACAGGACGGCCAAACAGGTCGCCAGTCGAGTGCAAAAGTATTTCATTAAACTGACAAAGGCGGGAATTCCAGTCCCAGGGCGAACTCCAAACCTGTGCATGTACAGCAAAAAGaccTCGAATAAGAGGCAGCACCacctgaacaagcacctgtacCGGCCGTCCACCTTCCTCACGTCCTACGAGCCGCCCGTCTACATGGAGGACGAGGACGAGCGCTCGAGCTTCATCAGCAGCCTGCAGGACGGCGCGGCCCACGATTCGGATGAGGATGGTGTCCCGGTGGAGCTGAGGCACCTGCCAGAGTACAAAGAGCTACAGGAGCTGAAAAGACTCAGGAAGCAGAAGATCCACGAGCTCCAGAGCGAGAGCACCCTCACACAGCACATAGGCTACaagTGTGATATGTGTGGCGTCGAGCCAATCCAGGGCGTGCGGTGGCACTGCCAGGACTGCCCGCAGGACAGTGCCGTCGACTTCTGCGCCAACTGCGCCGACTGTGCGTTTaagacggacacacacacgccgAGTCACCGCCTGGAGCCGGTCCAGCAGGCCGAGAGCTTCCTGGACAGAGACTACTGCCTGCCTGCGAGCGCCGCCTACAACTACCTGGACCCCAACTACTTCCCGGCCAACAGATGACAGGAGCGAGGCAGGGCCGCTCGAACCCGGGGCCGGACTCGCTTCGTCCACTCACCAGAGGCAGATCCGCTTACAGCAGGAGGACCCTGAACCACCGCTCTGCTCGAGCTCACACGCCATCTTCAACGCAAAAGGGAGGGAGCAACGTCCCAGATCGTCTCCACTCCCTTTCACCTAGCTGCTGTCAGgccttcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagagggtggaGATGAAAAGGGACTCGGTGCTGACTTTCCATTCACGCCAGGTTTTTAACCAGGAGGATTTGCTAACAAATCAGACGTTCTTAATTTACagaccctgaacacacacttttactagaagctgcttgtttttgtttttgttttttttttttccctcccttcTCACACGCCCAGACCTTACATCATGATGTCGAtcatgtttttgatcattttgatatatatatatattttttttatgttaaagcTCCAGCCCATGAAGCACTACAGCACGGAAAAGACCAGCTGAGAGACGCACTTGGTAGGTGTGAATAGCGTATGGGGTGtcgttttctttctctctctgtctttctctctcccgcTCTCCCTCTCATCCCTTCTTCTCGGTGTGTACTGTCGTCGATCATGTGAAGTATACAAACGTACGGTGAATCTAGCCAGTGGTAGGTGCTGTGCCATTTTTTGTTCTTCCATTCttccattcttcttctttttttttttttttttttttttttttttttttttttttttaaagcgtcCGGATGATTCCATGTCACTcgttttaggaaaaaaagaaaaagaaaggaaaaaaatgaaatggtggGAAAATCTGCCCAATCatcacacttcattttttttttccccccctgcCTCATggtccatgaaaaaaaaagtgtatttttattaatctatttaaaCGGCAATGATGCCAGAAAAGATGATATGGAGGTGGTGGCCGTCGTCGTCGCTGCAGCGCTCCACCCGTtgttattttatacacacagattTTGTTGTGCTTTCACGTAGACCATTTTGTATTGGATTTAGTTTTGTCCCtcccccctttctctctttttgccCTCCCTTCCCCTCCCTTCCCCTCCCCTGCTTCAATATCAGTGTATAACAGTCTGTTCTTAAATAATGTTCACATGTTAGAGGAGAACTGTGGAAATAAAAGTATGTGAAAAGTCTTTCTACACCA

Function

symbol description
zzz3 Predicted to enable zinc ion binding activity. Predicted to be involved in histone H4 acetylation. Predicted to be part of Ada2/Gcn5/Ada3 transcription activator complex. Orthologous to human ZZZ3 (zinc finger ZZ-type containing 3).

NR:

description
PREDICTED: ZZ-type zinc finger-containing protein 3 isoform X1

GO:

id name namespace
GO:0005634 nucleus cellular_component
GO:0003677 DNA binding molecular_function
GO:0003682 chromatin binding molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
K24536 ZZZ3; ZZ-type zinc finger-containing protein 3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026936482.2 False 4041 mRNA 0.53 12 29131186 29147492
XM_026936483.2 True 4976 mRNA 0.51 12 29131186 29147359

Neighbor

gene id symbol gene type direction distance location
pigk pigk,LOC107751867,LOC107599845 coding downstream 53750 29055012 ~ 29077436 (-)
LOC113540041 dnajb4,LOC108430719,LOC107599850,LOC107681825,LOC107751861 coding downstream 213034 28911613 ~ 28918152 (-)
LOC117597036 NA coding downstream 250984 28877573 ~ 28880202 (-)
gipc2 gipc2,LOC108430720 coding downstream 269743 28842922 ~ 28861443 (-)
LOC113540190 NA coding downstream 303222 28798977 ~ 28827964 (-)
dipk2aa dia1a,LOC108268022,LOC108437525,LOC107681802,LOC107599840,LOC107722302,LOC107565821 coding upstream 152814 29300306 ~ 29322917 (-)
chst2a LOC108268021 coding upstream 185627 29333119 ~ 29336703 (-)
pcolce2a LOC108268019 coding upstream 212008 29359500 ~ 29371526 (-)
mfsd8l2 LOC108267997,LOC108437504 coding upstream 294623 29442115 ~ 29452793 (-)
kcnmb2 NA coding upstream 313549 29461041 ~ 29466020 (-)
G73248 NA non-coding downstream 76959 29053597 ~ 29054227 (-)
G73264 NA non-coding downstream 87216 29043760 ~ 29043970 (-)
LOC113540203 NA non-coding downstream 101995 28940662 ~ 29029191 (-)
G73243 NA non-coding downstream 142803 28986472 ~ 28988383 (-)
LOC117597038 NA non-coding downstream 234387 28892016 ~ 28896799 (-)
G73249 fubp1 non-coding upstream 40666 29188158 ~ 29189340 (-)
G73318 LOC107599861 non-coding upstream 66061 29213553 ~ 29215051 (-)
G73319 NA non-coding upstream 68778 29216270 ~ 29218158 (-)
G73327 NA non-coding upstream 126097 29273589 ~ 29320334 (-)
G73423 NA non-coding upstream 392603 29540095 ~ 29540356 (-)
LOC117597037 dnajb4,LOC107566472,LOC107681825,LOC107599850,LOC107690981,LOC107751861,LOC108430719 other downstream 246221 28873578 ~ 28884965 (-)
LOC117597168 NA other downstream 339357 28787614 ~ 28791829 (-)
LOC113540437 fam159a other downstream 478761 28648324 ~ 28652425 (-)
trnas-uga_2 NA other downstream 894381 28236724 ~ 28236805 (-)
trnas-uga_1 NA other downstream 894919 28236186 ~ 28236267 (-)
usp33 usp33,LOC106569751,LOC107708728,LOC107751869 other upstream 1146 29148638 ~ 29171921 (-)
LOC113540665 LOC108267691,LOC108437516,LOC107715522,LOC107681815,LOC105889505 other upstream 416729 29564221 ~ 29575727 (-)
zgc:110366 LOC108267892,LOC108437513 other upstream 577096 29724588 ~ 29730857 (-)
G73619 blvra other upstream 872014 30019506 ~ 30022525 (-)
LOC113540055 LOC108268301 other upstream 1594035 30741527 ~ 30750968 (-)

Expression


Co-expression Network