kcnmb2


Basic Information

Item Value
gene id kcnmb2
gene name NA
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047598.1
NCBI id CM018544.1
chromosome length 33267568
location 29461041 ~ 29466020 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026937229.2
GTTTTCACGAGCATTTGTATAAGATGTTGTGCGAACTTTACCTCAGGGCTTTCCAGAGTTCTCTTCAGAGACCGTCTTCAGGCAGATCTCAGCACAAACCATCAGGAAAGACGCTTTTGGTTACGGAGAGAAAAGTCTCTAATGAGAAGAGtcagtgtgtgtgttataggagCATCTATCAGATGTTGCGAGGCCCTGAGCTGCTGGAGAGGAAGAGGACGGAGACGGCGCTGAAGGCCGGAGAAGACCGCGCTATTCTGCTTGGCCTCGGCATGATCTTCTGCTCCACCATGATGTACTTTGTGACCTGCATCACTGGGGTGCGCTCATACAGcgacagCAAGTGGACGGAGAAGAGCATGTGTACCATCCTGAACATCTCAGTAACTGAGGAGATGAACTGCTCCTACAGCTGTGGTGTGGACTGCTCGAGGAGCTCCACGTTCCCCTGCGTGCAGGTCTACGTTAGCCTGAACTCCACCAATCGCGTCGGGCTTCTCCATCACAACGAAGAATCAGAGAACACCGGATCTAAGTGCTTCTACATCCCGAAATGTCAGAAGGCCCATGCTGCTATTCACGCTGTGATAATGAACGTCTCCGAGAAGTTGCGGGAACAGCGCCACATCCCGTGCTACTACGATCCCTCTGATCACCAGGCCAACTTCCTCCTGAGCCGATTATACGGGAGCAGCGccattttcctctcttttttctggcCTTCTTGCATGCTAGCAGGAGGAGCCACCATCATCCTGTTGGTCAAACTTACCCAGTACCTGTCCATCCTGTGCGAACACATCAGCAAGCGCTCCAAGTGACTCCGTTTCAGTTTTAATATTCTGATAAATCAAAATGGTTGATCGAGTAGCACTGCGGTATAATAGGGTTTacgtttatatttgtttaactAAAATAACGAAAAAAAGCAGAGCAAACATTATAATCGCATAACAGAATTACTAAAACAAgaatcagtcattcagtcattaTAAAATATGGTGGAAAACAAAGTCTATTTTATTGTACAGCATTTCAACAAGCTATAAaactaaagatttttttttatatataagaatatagtttttaagacatttttattagtgGTTTAAGAAATTCGCatataaaactaaaatctaTCTGACCATGAAGATAAATAAGCTGAAGCAATTTAGTGATActgatgagaaatccaacatggCACAATATTTTCCAACataattcatttgaaaataagAGATTTTTTGTCTCTAGCAAATTTCACAAAAGATAAATAGCATTATTGTAAGCTATAATGTCTATATTGGCCATAAGTTGTCAATCTTTTAGTTAAACCGTGTTAATGTTTTCTTAGACCACACCAAATTAAAAATTTCTGCTGAATTATTCCAACTCATGTgtatatgttgataaatgccaatgaGACGTTGATTACCAAGCACATTCATGGGTTTAAATGTAGCCAAACCCAACAAAACGGCATAGCTGAAAacgacaaaatgatgactaCATGGTGAAAGACCACCTCTTCAGTGTGACATTCATTACATCTTCCACTAATGCAGCTTAGCCACTGCAGTGTGTCAGCTACAATAGACACATACAAattcttccttctttttatagggtgccattacttttgtcctaactGACTAGCCAgtcttattttgtcttaaatttCTCCTACCACAatggatcgctttctttcaagtcaatAATACAATCTAAAGCCGATCAGTCAAGGTTCACGTTAGTGAGTCTGCTTATACgtacatttacacaaactcaggaaaTCTCGTTgtctatgaacatttttctgaaataacTGGATTTTGTGGAAGTGCTCCTATGAACGACTTACGAAAAATTGATCATgttcagtttgataaatgaagcccagtgttattacagtttaaattaggctaatTTGCTCCACAATGATATCAAGATAATTAAAAAGAAGATGGTCATTCTCCCACACCTCAGTTATTTCATAACTCCACTGAGACACCACTAAAGGACCCAAAGTTATTCTTCTAGCAGTCTCGGAacttgaactcataacctttaACCAATACCTCATTGCCCAATGAGTCACATT
>XM_034303512.1
agttatggatttacctctaactgttacaaagcactgacactggagactccttccatgaatgttaagtAAACGTCTCTGTACAGAAAAAGTCACCATACCAATGATTATTCTTATTATGCTACCATGTGGAGTGGGCGCTATATAGAACATGCGAGACCATATGGAACATGGATAACACTTTGCTGATGTTTAATGAAATGCGATTGGTTGTACTCCGAGGTAATCCATCACTCCGTGGACGTCCTGCGCAGGTGCTCTATGAGTGGACGCTGACAGAGCGCTGGTTTCACCACGTGCATCTATCGTTGCCGTTCTTATTATGTTCTGCACAAGAACATACCGGCGGTGATCCATCACTCTGTCCCATCGGATAAAGAATTCTTTGTGTTAGATGTTTGCACAGAGTTGGTGCCATAGAGCTTTCCTAGATGGCTTAGATCACGCTTCTGCACACGGACGCATTTCTTATACGTTACGTAGCGTGTTTTAACTTTTATTCCTCAGGCCAGCTTTTCCCGAACGTCCCACGTCGATCGCAAAACAATGCACCAGAGGGCTTTCCAGAGTTCTCTTCAGAGACCGTCTTCAGGCAGATCTCAGCACAAACCATCAGGAAAGACGCTTTTGGTTACGGAGAGAAAAGTCTCTAATGAGAAGAGtcagtgtgtgtgttataggagCATCTATCAGATGTTGCGAGGCCCTGAGCTGCTGGAGAGGAAGAGGACGGAGACGGCGCTGAAGGCCGGAGAAGACCGCGCTATTCTGCTTGGCCTCGGCATGATCTTCTGCTCCACCATGATGTACTTTGTGACCTGCATCACTGGGGTGCGCTCATACAGcgacagCAAGTGGACGGAGAAGAGCATGTGTACCATCCTGAACATCTCAGTAACTGAGGAGATGAACTGCTCCTACAGCTGTGGTGTGGACTGCTCGAGGAGCTCCACGTTCCCCTGCGTGCAGGTCTACGTTAGCCTGAACTCCACCAATCGCGTCGGGCTTCTCCATCACAACGAAGAATCAGAGAACACCGGATCTAAGTGCTTCTACATCCCGAAATGTCAGAAGGCCCATGCTGCTATTCACGCTGTGATAATGAACGTCTCCGAGAAGTTGCGGGAACAGCGCCACATCCCGTGCTACTACGATCCCTCTGATCACCAGGCCAACTTCCTCCTGAGCCGATTATACGGGAGCAGCGccattttcctctcttttttctggcCTTCTTGCATGCTAGCAGGAGGAGCCACCATCATCCTGTTGGTCAAACTTACCCAGTACCTGTCCATCCTGTGCGAACACATCAGCAAGCGCTCCAAGTGACTCCGTTTCAGTTTTAATATTCTGATAAATCAAAATGGTTGATCGAGTAGCACTGCGGTATAATAGGGTTTacgtttatatttgtttaactAAAATAACGAAAAAAAGCAGAGCAAACATTATAATCGCATAACAGAATTACTAAAACAAgaatcagtcattcagtcattaTAAAATATGGTGGAAAACAAAGTCTATTTTATTGTACAGCATTTCAACAAGCTATAAaactaaagatttttttttatatataagaatatagtttttaagacatttttattagtgGTTTAAGAAATTCGCatataaaactaaaatctaTCTGACCATGAAGATAAATAAGCTGAAGCAATTTAGTGATActgatgagaaatccaacatggCACAATATTTTCCAACataattcatttgaaaataagAGATTTTTTGTCTCTAGCAAATTTCACAAAAGATAAATAGCATTATTGTAAGCTATAATGTCTATATTGGCCATAAGTTGTCAATCTTTTAGTTAAACCGTGTTAATGTTTTCTTAGACCACACCAAATTAAAAATTTCTGCTGAATTATTCCAACTCATGTgtatatgttgataaatgccaatgaGACGTTGATTACCAAGCACATTCATGGGTTTAAATGTAGCCAAACCCAACAAAACGGCATAGCTGAAAacgacaaaatgatgactaCATGGTGAAAGACCACCTCTTCAGTGTGACATTCATTACATCTTCCACTAATGCAGCTTAGCCACTGCAGTGTGTCAGCTACAATAGACACATACAAattcttccttctttttatagggtgccattacttttgtcctaactGACTAGCCAgtcttattttgtcttaaatttCTCCTACCACAatggatcgctttctttcaagtcaatAATACAATCTAAAGCCGATCAGTCAAGGTTCACGTTAGTGAGTCTGCTTATACgtacatttacacaaactcaggaaaTCTCGTTgtctatgaacatttttctgaaataacTGGATTTTGTGGAAGTGCTCCTATGAACGACTTACGAAAAATTGATCATgttcagtttgataaatgaagcccagtgttattacagtttaaattaggctaatTTGCTCCACAATGATATCAAGATAATTAAAAAGAAGATGGTCATTCTCCCACACCTCAGTTATTTCATAACTCCACTGAGACACCACTAAAGGACCCAAAGTTATTCTTCTAGCAGTCTCGGAacttgaactcataacctttaACCAATACCTCATTGCCCAATGAGTCACATT
>XM_034303513.1
CTCAGCACAAACCATCAGGAAAGACGCTTTTGGTTACGGAGAGAAAAGTCTCTAATGAGAAGAGtgtgtgtgttataggagCATCTATCAGATGTTGCGAGGCCCTGAGCTGCTGGAGAGGAAGAGGACGGAGACGGCGCTGAAGGCCGGAGAAGACCGCGCTATTCTGCTTGGCCTCGGCATGATCTTCTGCTCCACCATGATGTACTTTGTGACCTGCATCACTGGGGTGCGCTCATACAGcgacagCAAGTGGACGGAGAAGAGCATGTGTACCATCCTGAACATCTCAGTAACTGAGGAGATGAACTGCTCCTACAGCTGTGGTGTGGACTGCTCGAGGAGCTCCACGTTCCCCTGCGTGCAGGTCTACGTTAGCCTGAACTCCACCAATCGCGTCGGGCTTCTCCATCACAACGAAGAATCAGAGAACACCGGATCTAAGTGCTTCTACATCCCGAAATGTCAGAAGGCCCATGCTGCTATTCACGCTGTGATAATGAACGTCTCCGAGAAGTTGCGGGAACAGCGCCACATCCCGTGCTACTACGATCCCTCTGATCACCAGGCCAACTTCCTCCTGAGCCGATTATACGGGAGCAGCGccattttcctctcttttttctggcCTTCTTGCATGCTAGCAGGAGGAGCCACCATCATCCTGTTGGTCAAACTTACCCAGTACCTGTCCATCCTGTGCGAACACATCAGCAAGCGCTCCAAGTGACTCCGTTTCAGTTTTAATATTCTGATAAATCAAAATGGTTGATCGAGTAGCACTGCGGTATAATAGGGTTTacgtttatatttgtttaactAAAATAACGAAAAAAAGCAGAGCAAACATTATAATCGCATAACAGAATTACTAAAACAAgaatcagtcattcagtcattaTAAAATATGGTGGAAAACAAAGTCTATTTTATTGTACAGCATTTCAACAAGCTATAAaactaaagatttttttttatatataagaatatagtttttaagacatttttattagtgGTTTAAGAAATTCGCatataaaactaaaatctaTCTGACCATGAAGATAAATAAGCTGAAGCAATTTAGTGATActgatgagaaatccaacatggCACAATATTTTCCAACataattcatttgaaaataagAGATTTTTTGTCTCTAGCAAATTTCACAAAAGATAAATAGCATTATTGTAAGCTATAATGTCTATATTGGCCATAAGTTGTCAATCTTTTAGTTAAACCGTGTTAATGTTTTCTTAGACCACACCAAATTAAAAATTTCTGCTGAATTATTCCAACTCATGTgtatatgttgataaatgccaatgaGACGTTGATTACCAAGCACATTCATGGGTTTAAATGTAGCCAAACCCAACAAAACGGCATAGCTGAAAacgacaaaatgatgactaCATGGTGAAAGACCACCTCTTCAGTGTGACATTCATTACATCTTCCACTAATGCAGCTTAGCCACTGCAGTGTGTCAGCTACAATAGACACATACAAattcttccttctttttatagggtgccattacttttgtcctaactGACTAGCCAgtcttattttgtcttaaatttCTCCTACCACAatggatcgctttctttcaagtcaatAATACAATCTAAAGCCGATCAGTCAAGGTTCACGTTAGTGAGTCTGCTTATACgtacatttacacaaactcaggaaaTCTCGTTgtctatgaacatttttctgaaataacTGGATTTTGTGGAAGTGCTCCTATGAACGACTTACGAAAAATTGATCATgttcagtttgataaatgaagcccagtgttattacagtttaaattaggctaatTTGCTCCACAATGATATCAAGATAATTAAAAAGAAGATGGTCATTCTCCCACACCTCAGTTATTTCATAACTCCACTGAGACACCACTAAAGGACCCAAAGTTATTCTTCTAGCAGTCTCGGAacttgaactcataacctttaACCAATACCTCATTGCCCAATGAGTCACATT

Function

NR:

description
PREDICTED: calcium-activated potassium channel subunit beta-2-like

GO:

id name namespace
GO:0034220 ion transmembrane transport biological_process
GO:0006813 potassium ion transport biological_process
GO:0016020 membrane cellular_component
GO:0015269 calcium-activated potassium channel activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026937229.2 False 2101 mRNA 0.40 4 29461041 29464798
XM_034303512.1 True 2609 mRNA 0.41 5 29461041 29466020
XM_034303513.1 False 2010 mRNA 0.40 4 29461041 29464711

Neighbor

gene id symbol gene type direction distance location
mfsd8l2 LOC108267997,LOC108437504 coding downstream 8248 29442115 ~ 29452793 (-)
pcolce2a LOC108268019 coding downstream 89515 29359500 ~ 29371526 (-)
chst2a LOC108268021 coding downstream 124338 29333119 ~ 29336703 (-)
dipk2aa dia1a,LOC108268022,LOC108437525,LOC107681802,LOC107599840,LOC107722302,LOC107565821 coding downstream 138124 29300306 ~ 29322917 (-)
zzz3 zzz3,LOC104950552 coding downstream 313549 29131186 ~ 29147492 (-)
eif4a2 eif4a2,LOC108267852,LOC107568626,LOC107593804,LOC105889495 coding upstream 53071 29519091 ~ 29530681 (-)
LOC113540702 NA coding upstream 57374 29523394 ~ 29523466 (-)
LOC113540698 NA coding upstream 57703 29523723 ~ 29523912 (-)
LOC113540697 NA coding upstream 58489 29524509 ~ 29524687 (-)
LOC113540703 NA coding upstream 58969 29524989 ~ 29525061 (-)
G73327 NA non-coding downstream 140707 29273589 ~ 29320334 (-)
G73319 NA non-coding downstream 242883 29216270 ~ 29218158 (-)
G73318 LOC107599861 non-coding downstream 245990 29213553 ~ 29215051 (-)
G73247 NA non-coding downstream 264874 29128055 ~ 29196167 (-)
G73423 NA non-coding upstream 74075 29540095 ~ 29540356 (-)
G73439 NA non-coding upstream 141581 29607601 ~ 29607805 (-)
G73452 LOC108268059 non-coding upstream 205167 29671187 ~ 29674270 (-)
G73457 rc3h1,LOC108267889,LOC108437509 non-coding upstream 245066 29711086 ~ 29712194 (-)
G73458 LOC108267889 non-coding upstream 246873 29712893 ~ 29713446 (-)
usp33 usp33,LOC106569751,LOC107708728,LOC107751869 other downstream 289120 29148638 ~ 29171921 (-)
LOC117597037 dnajb4,LOC107566472,LOC107681825,LOC107599850,LOC107690981,LOC107751861,LOC108430719 other downstream 576076 28873578 ~ 28884965 (-)
LOC117597168 NA other downstream 669212 28787614 ~ 28791829 (-)
LOC113540437 fam159a other downstream 808616 28648324 ~ 28652425 (-)
trnas-uga_2 NA other downstream 1224236 28236724 ~ 28236805 (-)
LOC113540665 LOC108267691,LOC108437516,LOC107715522,LOC107681815,LOC105889505 other upstream 98201 29564221 ~ 29575727 (-)
zgc:110366 LOC108267892,LOC108437513 other upstream 258568 29724588 ~ 29730857 (-)
G73619 blvra other upstream 553486 30019506 ~ 30022525 (-)
LOC113540055 LOC108268301 other upstream 1275507 30741527 ~ 30750968 (-)
ccl20l LOC100304631 other upstream 1307429 30773449 ~ 30775819 (-)

Expression


Co-expression Network