Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC117597042 |
| gene name | NA |
| gene type | coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 2730786 ~ 2732506 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_034303541.1 | True | 908 | mRNA | 0.51 | 6 | 2730786 | 2732506 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| greb1l | greb1l | coding | downstream | 382442 | 2284687 ~ 2348344 (-) |
| kiaa0232 | kiaa0232,zgc:158564 | coding | downstream | 537893 | 2175540 ~ 2192893 (-) |
| tbc1d14 | tbc1d14 | coding | downstream | 562135 | 2115603 ~ 2168651 (-) |
| LOC113524117 | NA | coding | downstream | 649030 | 2057472 ~ 2081756 (-) |
| LOC113524116 | NA | coding | downstream | 656272 | 2071011 ~ 2074514 (-) |
| trnag-ucc_10 | NA | coding | upstream | 9251 | 2741757 ~ 2741828 (-) |
| trnag-ucc_11 | NA | coding | upstream | 18692 | 2751198 ~ 2751269 (-) |
| LOC117597045 | NA | coding | upstream | 33012 | 2765518 ~ 2767521 (-) |
| trnag-ucc_12 | NA | coding | upstream | 49771 | 2782277 ~ 2782348 (-) |
| trnar-ucu | NA | coding | upstream | 55196 | 2787702 ~ 2787773 (-) |
| G58648 | NA | non-coding | downstream | 111993 | 2607752 ~ 2618793 (-) |
| G58650 | NA | non-coding | downstream | 113357 | 2611416 ~ 2617429 (-) |
| G58645 | NA | non-coding | downstream | 120534 | 2604477 ~ 2610252 (-) |
| G58628 | NA | non-coding | downstream | 162982 | 2535115 ~ 2567804 (-) |
| G58598 | NA | non-coding | downstream | 328482 | 2376593 ~ 2402304 (-) |
| G58703 | NA | non-coding | upstream | 98666 | 2831172 ~ 2831373 (-) |
| G58704 | grpel1 | non-coding | upstream | 100172 | 2832678 ~ 2834631 (-) |
| LOC113524008 | NA | non-coding | upstream | 112074 | 2844580 ~ 2853974 (-) |
| G58809 | NA | non-coding | upstream | 297197 | 3029703 ~ 3084722 (-) |
| G58832 | NA | non-coding | upstream | 340667 | 3073173 ~ 3073765 (-) |
| trnag-ucc_9 | NA | other | downstream | 4502 | 2680581 ~ 2726284 (-) |
| trnag-ucc_8 | NA | other | downstream | 14685 | 2716030 ~ 2716101 (-) |
| trnag-ucc_7 | NA | other | downstream | 20588 | 2710127 ~ 2710198 (-) |
| trnag-ucc_6 | NA | other | downstream | 24664 | 2706051 ~ 2706122 (-) |
| trnag-ucc_5 | NA | other | downstream | 49940 | 2680775 ~ 2680846 (-) |
| G58696 | NA | other | upstream | 82484 | 2814990 ~ 2817550 (-) |
| LOC113523993 | LOC108261096,LOC108261462,LOC108261092 | other | upstream | 375548 | 3108054 ~ 3115054 (-) |
| ptprn2 | ptprn2 | other | upstream | 491391 | 3223897 ~ 3457803 (-) |
| G59069 | NA | other | upstream | 854277 | 3586783 ~ 3590737 (-) |
| si:ch73-174h16.4 | LOC108268225 | other | upstream | 897482 | 3629988 ~ 3639208 (-) |
