tbc1d14 (tbc1d14)


Basic Information

Item Value
gene id tbc1d14
gene name tbc1d14
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047598.1
NCBI id CM018544.1
chromosome length 33267568
location 2115603 ~ 2168651 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_034304107.1
GGCGGCCGCAGCGGAGCAGGTAACGCGACCTGTTTAATCTTCCCTCCCGGCAGCTTCACAGCAGCTCAGGCGGCGCTGGAGGAGTAAAAGCAGACCAGTGCGGGTTTCTTTGTCGGACCGTGTCAGTAGAAGtcgctgaagtgtgtgtgagagtgtgtgagagtgtgtttgaggTGAAGCAGGAACAGAACTGCAGAGATGAGTGAAGTTGAATGTGAACGGAAGTGAACTTTATATTTCACATCATCACTGCAGCCGCGCGCTGTTTATGAGCGCGCATTAGAGCGTTATTAACGCCACGTGATGCAGTTATTCAGAGTGCACTTTTTCCTCCTGCTCTGAAGTTCATGccgggtttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgaagagaagcgccgagtctgagagagagaggaagtgaggaaggtgctgtctgtccatcatcttcatcatcatcatcatcatcatcttcatcatcatcatcatcatcatcatggacATGCACATAAGATGTGTACAAGTGTTATAAAGCAACACAACACGGAAGAAGGGATGGACACGAGGACAAACCCGGAtggaaaagCGTTTCACGCCGCTGAAAACGGCTCTGTCTTCGGACCCCACGCTCCAGATCTccttcacagtgtgtgtgtgagctccaCGCCGCTGTACTGCCGCTCCGCTTCCGGCTCAGCCTCGCTGCACAGCGCCCCCTGTGGCGAGGAGGAGCAGCACAGCGTGGACTCGCAGGACTCGGGCATCCCGACACTGGAGCTCAGCTCACCCGATGTGACAGAAGAGTCGCACGGCACCGAGCCGTTAAGTCTGAGACACCAAGACGCTCCGGCCACGCTGAAGCTAGAGACGATAGGCGAGGGCGGAGCTTCGAGTCAGGTCAGGGGTAGAGCTTTGAGCTATCGAGACTCCACCTCTGTGTGCAGCACCTCCAGTCTGAGCACGGACTTCTCGGCTACGCTGTCTCTCGGCAACGACGACATCGCTGGTGACTTCGTGGTGACATCGGACTCGAGTGCCGTCGTCGATTTTCACGATTTTAACAACTTCTCTCGGTTCCCCCAAACTCCGCCCATAAATAGCGTACACAGAGACCATCCACTGCAGCACCATGACGAGGTAGCGGCGAAGAAAGAGAGTCCGATTGTGAACTTCTTCAACAGGAGTCTGTTCTCTAAGAAGGTGAGCGACGCTGGAGATCCGAACGCTCACTCTGAGCCGAGCTGGAGGCTGTTTGGCAGAAGTTCACTCAGACAGACCCAAAGGGTTTTAAAGgaaaaTGAAAAGGCCGGTGGTTCTGTATCTCCCAGACAATGCGTGAGGAAACACCTGGAGTTTGAGCCTCTCTCCACCACTGCTCTCATACTGGAACACCGACCTGCgaatCTCCCAGCGAAGCCGGCAGAAGAAGCtcagaaacacaaacagcagTATGAAGAGATGGTGGCTCAGGCCAAGAAGcgagagCTAAAGGAGGCTCAGAAGAAGAGGAGGCAGTTGGAGGAGAGAGTGCGATTAGAGGAGAGTATCGGCAACGCAGCGCTCACCTGGAGTCAAGAGATCCTGCCAAACTGGCACAAcgtgcgCAGCTCTAAGCGAGTGAGGGATTTGTGGTGGCAGGGAATCCCCCCGAGTGTGAGAGGACGAGTGTGGAGCCTCGCTATAGGCAACGAGCTCAACATCACAcacgAGCTGTACGATATCTGTTTGGCGAGAGCGAAGGAGAAGTGGAGCGCTGCGCCTTCATCAGTCACCACAACAGAAAACGACACAGGAGATGCGGGTTCGTCTCAGGCCGATCGCGAGGCGAGTTTAGAGCTGATCAAGTTGGACATTTCCAGAACTTTCCCCAGCCTCTGCATATTCCAGAAGGGAGGCCCTTATCATGATGTGCTGCACAGCATTCTGGGAGCTTACACCTGTTACCGGCCTGACGTGGGATATgtacaGGGGATGTCGTTCATTGCTGCAGTGTTGATCTTGAACATGAACACCGCCGATGCCTTCATCGCTTTTGCCAACCTGCTGAACAAACCATGTCAGATGGCTTTCTACAGAGTGGACCATAGCCTTATGCTGACGTACTTTGCTGCATTTGAGGTGTTTTTTGAAGAAAACCTACCAAAGCTATTTGCACATTTCAAGTGTAACAACTTGACACCTGACATTTATCTCATTGACTGgatctTCACCCTGTACAGTAAGTCTCTGCCACTGGACATTGCGTGTCGTGTGTGGGACGTATTTTGTCGAGACAGCGAGGAGTTTCTCTTCCGCACGGCTCTCGGGATCCTGCGTTTCTATGGCGACGTCCTCACGCACATGGACTTCATCCATATGGCGCAGTTCCTGACGCGGCTGCCGGAGCagatctccacacacacacagtcgcacACACTCTTCTCCTGCATCAGCAGCATCAACATGAGCTGCAGGAACAGGACATGGACACAGGTGCTCCAGGCTCTGCAGAAAGAGACGGAACATTCCAGTCCCGTGCTGAAACATTGATGAATTACACACTCGCATGGAGGCTagaatagagtgtgtgtgtgtatgtgtgtgtgtgtgtatgtgtgtgtgtgtgtatgtgtgtgttgaagctaAACCCTAAGACTCAGGACCTCTGTTTGTGTAATTCAGACTCCtggaaatgaacattttttcgGGAATGAAGAACGAATGCATCAGCATGcagtatacaaacacacacacacacacacacacagctgggaTTCGGACACAGCCAGCCAAACGTCTGCTGATGTTTCCTGAACCTCTGTGTCAGGCGCCAGAGGTGAGAAAgagctctgtgattggctgctccGGAGAAGAGAACCAACCaattgaccaatcagagcgttGGAACGGTAGCTAGGTTAGTTTATGTGATGAAAACCACATACTACTGCACTAAATAGTAAGTTACAATAGTAATAGGCACTATaggtactttttattttaaagagagAGTTATTTCCTACCATGCATTGCACCTACGTGGCTGGTTGGCACTAACGTCAGATCTACTAGTCTACTCCAGTCTACTATGGACAGAAAAAGTCAAATCTGCTGTCATCCCTCTGTTCATCCATCTCTTAATTTTTTGTGTTCTGTATGTATACACTAAAgggtcaaaagtatgtgcacccctgaccatcacccccatatgtggttcttccccaaagttggaaacacacacttgtatagaatgtctttgtatgttgtagcattacag

Function

symbol description
tbc1d14 Predicted to enable GTPase activator activity. Predicted to be involved in activation of GTPase activity; intracellular protein transport; and regulation of autophagosome assembly. Predicted to be active in autophagosome and recycling endosome. Orthologous to human TBC1D14 (TBC1 domain family member 14).

NR:

description
PREDICTED: TBC1 domain family member 14 isoform X1

GO: NA

KEGG:

id description
K20167 TBC1D14; TBC1 domain family member 14

RNA

RNA id representative length rna type GC content exon number start site end site
XM_034304107.1 True 3269 mRNA 0.51 15 2115603 2168651

Neighbor

gene id symbol gene type direction distance location
LOC113524117 NA coding downstream 33847 2057472 ~ 2081756 (-)
LOC113524116 NA coding downstream 41089 2071011 ~ 2074514 (-)
LOC113524112 NA coding downstream 58887 2045162 ~ 2056716 (-)
LOC113524113 NA coding downstream 71864 2036752 ~ 2043739 (-)
LOC113524114 NA coding downstream 93407 2006109 ~ 2022196 (-)
kiaa0232 kiaa0232,zgc:158564 coding upstream 6889 2175540 ~ 2192893 (-)
greb1l greb1l coding upstream 116036 2284687 ~ 2348344 (-)
LOC117597042 NA coding upstream 562135 2730786 ~ 2732506 (-)
trnag-ucc_10 NA coding upstream 573106 2741757 ~ 2741828 (-)
trnag-ucc_11 NA coding upstream 582547 2751198 ~ 2751269 (-)
G58537 NA non-coding downstream 19477 2066771 ~ 2096126 (-)
LOC113524118 NA non-coding downstream 23589 2090600 ~ 2092014 (-)
LOC113524119 NA non-coding downstream 28823 2085859 ~ 2086780 (-)
G58276 NA non-coding downstream 137060 1978247 ~ 1978543 (-)
G58263 NA non-coding downstream 137750 1946349 ~ 1977853 (-)
LOC117597186 NA non-coding upstream 59595 2228246 ~ 2230981 (-)
G58585 NA non-coding upstream 99541 2268192 ~ 2274161 (-)
G58594 NA non-coding upstream 180068 2348719 ~ 2826890 (-)
G58598 NA non-coding upstream 207942 2376593 ~ 2402304 (-)
G58628 NA non-coding upstream 366464 2535115 ~ 2567804 (-)
G58534 NA other downstream 11592 2071024 ~ 2104011 (-)
G58190 NA other downstream 422606 1692326 ~ 1692997 (-)
G57868 NA other downstream 1066762 985911 ~ 1048841 (-)
LOC117597039 NA other downstream 1086578 1010225 ~ 1029025 (-)
G57838 NA other downstream 1369572 683488 ~ 746031 (-)
LOC113523983 NA other upstream 35901 2204552 ~ 2222099 (-)
trnag-ucc_1 NA other upstream 489352 2658003 ~ 2658074 (-)
trnag-ucc_2 NA other upstream 498116 2666767 ~ 2666838 (-)
trnag-ucc_3 NA other upstream 503249 2671900 ~ 2671971 (-)
trnag-ucc_4 NA other upstream 504120 2672771 ~ 2676041 (-)

Expression


Co-expression Network