Gene
RNA
| Item | Value |
|---|---|
| gene id | trnag-ucc_11 |
| gene name | NA |
| gene type | coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 2751198 ~ 2751269 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| trnag-ucc_11 | True | 72 | tRNA | 0.56 | 1 | 2751198 | 2751269 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| trnag-ucc_10 | NA | coding | downstream | 9370 | 2741757 ~ 2741828 (-) |
| LOC117597042 | NA | coding | downstream | 18692 | 2730786 ~ 2732506 (-) |
| greb1l | greb1l | coding | downstream | 402854 | 2284687 ~ 2348344 (-) |
| kiaa0232 | kiaa0232,zgc:158564 | coding | downstream | 558305 | 2175540 ~ 2192893 (-) |
| tbc1d14 | tbc1d14 | coding | downstream | 582547 | 2115603 ~ 2168651 (-) |
| LOC117597045 | NA | coding | upstream | 14249 | 2765518 ~ 2767521 (-) |
| trnag-ucc_12 | NA | coding | upstream | 31008 | 2782277 ~ 2782348 (-) |
| trnar-ucu | NA | coding | upstream | 36433 | 2787702 ~ 2787773 (-) |
| trnag-ucc_13 | NA | coding | upstream | 40604 | 2791873 ~ 2791944 (-) |
| trnag-ucc_14 | NA | coding | upstream | 50710 | 2801979 ~ 2802050 (-) |
| G58648 | NA | non-coding | downstream | 132405 | 2607752 ~ 2618793 (-) |
| G58650 | NA | non-coding | downstream | 133769 | 2611416 ~ 2617429 (-) |
| G58645 | NA | non-coding | downstream | 140946 | 2604477 ~ 2610252 (-) |
| G58628 | NA | non-coding | downstream | 183394 | 2535115 ~ 2567804 (-) |
| G58598 | NA | non-coding | downstream | 348894 | 2376593 ~ 2402304 (-) |
| G58703 | NA | non-coding | upstream | 79903 | 2831172 ~ 2831373 (-) |
| G58704 | grpel1 | non-coding | upstream | 81409 | 2832678 ~ 2834631 (-) |
| LOC113524008 | NA | non-coding | upstream | 93311 | 2844580 ~ 2853974 (-) |
| G58809 | NA | non-coding | upstream | 278434 | 3029703 ~ 3084722 (-) |
| G58832 | NA | non-coding | upstream | 321904 | 3073173 ~ 3073765 (-) |
| trnag-ucc_9 | NA | other | downstream | 24914 | 2680581 ~ 2726284 (-) |
| trnag-ucc_8 | NA | other | downstream | 35097 | 2716030 ~ 2716101 (-) |
| trnag-ucc_7 | NA | other | downstream | 41000 | 2710127 ~ 2710198 (-) |
| trnag-ucc_6 | NA | other | downstream | 45076 | 2706051 ~ 2706122 (-) |
| trnag-ucc_5 | NA | other | downstream | 70352 | 2680775 ~ 2680846 (-) |
| G58696 | NA | other | upstream | 63721 | 2814990 ~ 2817550 (-) |
| LOC113523993 | LOC108261096,LOC108261462,LOC108261092 | other | upstream | 356785 | 3108054 ~ 3115054 (-) |
| ptprn2 | ptprn2 | other | upstream | 472628 | 3223897 ~ 3457803 (-) |
| G59069 | NA | other | upstream | 835514 | 3586783 ~ 3590737 (-) |
| si:ch73-174h16.4 | LOC108268225 | other | upstream | 878719 | 3629988 ~ 3639208 (-) |
