trnah-gug_3


Basic Information

Item Value
gene id trnah-gug_3
gene name NA
gene type misc
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047597.1
NCBI id CM018543.1
chromosome length 33776708
location 3034482 ~ 3034553 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>trnah-gug_3
GCCGTGATCGTATAGTGGTTAGTACTCTGCGTTGTGGCCGCAGCAACCCCGGTTCGAATCCGGGTCACGGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnah-gug_3 True 72 tRNA 0.60 1 3034482 3034553

Neighbor

gene id symbol gene type direction distance location
irf2a LOC108263359,LOC108434128 coding downstream 891316 2126818 ~ 2143166 (-)
sod3b sod3 coding downstream 1022790 2007909 ~ 2011692 (-)
aip aip,LOC106609959 coding downstream 1027229 2001449 ~ 2007253 (-)
ccdc149b ccdc149b,LOC108263252,LOC107550975,LOC105908379 coding downstream 1069575 1947375 ~ 1964907 (-)
si:ch211-113e8.11 LOC108263804 coding downstream 1139383 1893586 ~ 1895099 (-)
spcs3 spcs3,LOC106602378 coding upstream 254177 3288730 ~ 3293879 (-)
wdr17 wdr17 coding upstream 297415 3331968 ~ 3433129 (-)
cep44 cep44 coding upstream 648890 3683443 ~ 3699520 (-)
galnt7 galnt7 coding upstream 808926 3843479 ~ 3869764 (-)
galntl6 galntl6,si:ch211-15e22.3,LOC107670789 coding upstream 842637 3877190 ~ 4089518 (-)
G39854 NA non-coding downstream 307008 2725305 ~ 2727474 (-)
G39774 NA non-coding downstream 556058 2477692 ~ 2478424 (-)
G39707 NA non-coding downstream 894633 2137447 ~ 2139849 (-)
G39705 NA non-coding downstream 907835 2123975 ~ 2126647 (-)
G39699 tmem134 non-coding downstream 920948 2109110 ~ 2113534 (-)
G40250 NA non-coding upstream 459112 3493665 ~ 3583108 (-)
G40278 NA non-coding upstream 605211 3639764 ~ 3640380 (-)
G40315 NA non-coding upstream 634294 3668847 ~ 3672053 (-)
G40316 NA non-coding upstream 638597 3673150 ~ 3673811 (-)
G40323 NA non-coding upstream 667668 3702221 ~ 3712833 (-)
trnah-gug_2 NA other downstream 545 3033866 ~ 3033937 (-)
trnae-uuc NA other downstream 1679 3032732 ~ 3032803 (-)
tenm3 tenm3,LOC108434131 other downstream 50279 2220147 ~ 2984203 (-)
G39720 NA other downstream 860731 2173358 ~ 2173751 (-)
lgi2b LOC108263253,LOC108411628 other downstream 1054933 1969763 ~ 1979549 (-)
dclk2a LOC108263760,LOC108429594 other upstream 1510586 4545139 ~ 4609450 (-)
tmem184c tmem184c,LOC107742544,LOC107670728,LOC107654969 other upstream 1859349 4893902 ~ 4906239 (-)
lsm6 lsm6 other upstream 2169153 5203706 ~ 5227967 (-)
gab1 gab1 other upstream 2721464 5756017 ~ 5819513 (-)
lef1 lef1,LOC103361279 other upstream 4126921 7161474 ~ 7204699 (-)

Expression


Co-expression Network