G16900


Basic Information

Item Value
gene id G16900
gene name NA
gene type unknown
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047595.1
NCBI id CM018541.1
chromosome length 35600603
location 30640698 ~ 30642974 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU19913
GAAGAAATCACATACGATTATGGCAATTCTGAGTTGCCTTGGAGAAATAAGATTGTAGCTGAAGAACACCAACTGCCACCAGAGGAAAACAGCACTATGGCATTGAGTGAGGCCAGGAGGGTGAAAGACAATCAGTCTCTGTCACAGCACCAGGCTGTTTCTGAGGCAGACCCCTTTACCCCTGTGACCGAAGATACCCAGGCAGCCATCAACCAAACAGAACAgAATATAGCTGGAGCCGTCACTGAGGTTACATCAGAGCTGACGTCTGTGATGGACAAGTTGGAGACTGATGTtccaggaggagagacagaaaagaatacAGCTGGAACCATTACTGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU19913 True 342 TUCP 0.48 6 30640698 30642974

Neighbor

gene id symbol gene type direction distance location
trnah-gug NA coding downstream 7561 30633066 ~ 30633137 (-)
xrcc2 xrcc2 coding downstream 54008 30582017 ~ 30586690 (-)
kmt2ca kmt2c coding downstream 78785 30400155 ~ 30561913 (-)
ptchd3a ptchd3 coding downstream 295978 30338950 ~ 30344720 (-)
anxa13 anxa13,LOC108272932,LOC108431991,LOC107570049,LOC107675241,LOC107588022 coding downstream 432624 30193051 ~ 30208074 (-)
LOC117595698 NA coding upstream 142989 30785963 ~ 30789410 (-)
LOC113547558 LOC108268894,LOC108264971,LOC108273546,LOC108270747,LOC108257668,LOC108270753 coding upstream 327043 30970017 ~ 30982915 (-)
ntng1a ntng1,LOC102781425 coding upstream 523452 31166426 ~ 31312036 (-)
prmt6 prmt6 coding upstream 682940 31325914 ~ 31327457 (-)
arhgap29a arhgap29 coding upstream 1289495 31932469 ~ 31991048 (-)
LOC117595754 NA non-coding downstream 674 30637849 ~ 30640024 (-)
G16897 NA non-coding downstream 3114 30637083 ~ 30637584 (-)
LOC117597677 NA non-coding downstream 258123 30379844 ~ 30382575 (-)
G16747 NA non-coding downstream 309085 30331397 ~ 30331613 (-)
G16721 NA non-coding downstream 391021 30249464 ~ 30249677 (-)
LOC117596846 NA non-coding upstream 120611 30763585 ~ 30764477 (-)
G17000 NA non-coding upstream 123215 30766189 ~ 30766709 (-)
G17025 NA non-coding upstream 198991 30841965 ~ 30889214 (-)
LOC117598443 telo2 non-coding upstream 356506 30999480 ~ 31001678 (-)
G17222 NA non-coding upstream 386482 31029456 ~ 31029677 (-)
gpr158a gpr158 other downstream 307478 30232323 ~ 30333220 (-)
pcolce2b pcolce2,LOC108272785,LOC107566300,LOC107675309,LOC107588030 other downstream 825884 29797753 ~ 29814814 (-)
dipk2ab cunh3orf58,dia1b,LOC108272730,LOC107687522,LOC107741829,LOC107739121,LOC107588034 other downstream 1036460 29548166 ~ 29604238 (-)
sugct sugct,LOC107687505,LOC107713787 other downstream 3087192 27445558 ~ 27553506 (-)
f13a1a.1 LOC108263067 other downstream 3883455 26745018 ~ 26757243 (-)
telo2 telo2 other upstream 345149 30988123 ~ 31014649 (-)
G17199 telo2 other upstream 359435 31002409 ~ 31003309 (-)
rnpc3 rnpc3 other upstream 941767 31584741 ~ 31611972 (-)
G17630 LOC108267341 other upstream 1357651 32000625 ~ 32052554 (-)
G18097 ift140 other upstream 1946928 32589902 ~ 32596805 (-)

Expression


Co-expression Network