G17199 (telo2)


Basic Information

Item Value
gene id G17199
gene name telo2
gene type unknown
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047595.1
NCBI id CM018541.1
chromosome length 35600603
location 31002409 ~ 31003309 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU20251
CGTACAGTTCAGTAAAGTGCTGTTACACCTGGAGGACAGGTACAACATCATAGGCTTCTACACACTCCGGCAGAACGCCATGGTGGCCcttgctgtcacacacacacagccgGTTGTGGAATATCTGACTGCTGAGTTTTACTCTCTGAACTACAGCCTGAGACAGAGGCTCGACATCCTGGAGGTCCTTGCTGTCTCCGCCCAGGAGCTCTCTGAGCCAATCACAGAGAAGAGGGTGGAGTCACAGGCAGTTGCCAAGGTGACACCCCTGGACAGGTGTGGTGAGCTGGAACACTGGCGTGAGGTTGTGGAAAAACGCATTCAGAGTAAGACACGGC

Function

symbol description
telo2 Predicted to enable Hsp90 protein binding activity and telomeric DNA binding activity. Predicted to be involved in protein stabilization and telomere maintenance via telomerase. Predicted to be located in cytoplasm; membrane; and nucleus. Predicted to be part of ASTRA complex. Predicted to be active in cytosol. Orthologous to human TELO2 (telomere maintenance 2).

NR:

description
PREDICTED: telomere length regulation protein TEL2 homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU20251 True 338 TUCP 0.41 3 31002409 31003309

Neighbor

gene id symbol gene type direction distance location
LOC113547558 LOC108268894,LOC108264971,LOC108273546,LOC108270747,LOC108257668,LOC108270753 coding downstream 19494 30970017 ~ 30982915 (-)
LOC117595698 NA coding downstream 212999 30785963 ~ 30789410 (-)
trnah-gug NA coding downstream 369272 30633066 ~ 30633137 (-)
xrcc2 xrcc2 coding downstream 415719 30582017 ~ 30586690 (-)
kmt2ca kmt2c coding downstream 440496 30400155 ~ 30561913 (-)
ntng1a ntng1,LOC102781425 coding upstream 163117 31166426 ~ 31312036 (-)
prmt6 prmt6 coding upstream 322605 31325914 ~ 31327457 (-)
arhgap29a arhgap29 coding upstream 929160 31932469 ~ 31991048 (-)
trnar-ccg NA coding upstream 1015786 32019095 ~ 32019167 (-)
trnar-ccg_1 NA coding upstream 1075234 32078543 ~ 32078615 (-)
LOC117598443 telo2 non-coding downstream 731 30999480 ~ 31001678 (-)
G17025 NA non-coding downstream 113195 30841965 ~ 30889214 (-)
G17000 NA non-coding downstream 235700 30766189 ~ 30766709 (-)
LOC117596846 NA non-coding downstream 237932 30763585 ~ 30764477 (-)
LOC117595754 NA non-coding downstream 362385 30637849 ~ 30640024 (-)
G17222 NA non-coding upstream 26147 31029456 ~ 31029677 (-)
G17265 NA non-coding upstream 93523 31096832 ~ 31097965 (-)
G17277 NA non-coding upstream 123424 31126733 ~ 31130151 (-)
G17285 NA non-coding upstream 161702 31165011 ~ 31166371 (-)
G17338 NA non-coding upstream 309093 31312402 ~ 31312656 (-)
G16900 NA other downstream 359435 30640698 ~ 30642974 (-)
gpr158a gpr158 other downstream 669189 30232323 ~ 30333220 (-)
pcolce2b pcolce2,LOC108272785,LOC107566300,LOC107675309,LOC107588030 other downstream 1187595 29797753 ~ 29814814 (-)
dipk2ab cunh3orf58,dia1b,LOC108272730,LOC107687522,LOC107741829,LOC107739121,LOC107588034 other downstream 1398171 29548166 ~ 29604238 (-)
sugct sugct,LOC107687505,LOC107713787 other downstream 3448903 27445558 ~ 27553506 (-)
rnpc3 rnpc3 other upstream 581432 31584741 ~ 31611972 (-)
G17630 LOC108267341 other upstream 997316 32000625 ~ 32052554 (-)
G18097 ift140 other upstream 1586593 32589902 ~ 32596805 (-)
LOC113523757 LOC108263642,LOC108270747,LOC108268894,LOC108263117,LOC108264948,LOC108268379,LOC108257668,LOC108261292 other upstream 1896560 32899869 ~ 32955703 (-)
G18432 NA other upstream 2568070 33571379 ~ 33571830 (-)

Expression


Co-expression Network