Gene
RNA
| Item | Value |
|---|---|
| gene id | G17265 |
| gene name | NA |
| gene type | non-coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047595.1 |
| NCBI id | CM018541.1 |
| chromosome length | 35600603 |
| location | 31096832 ~ 31097965 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU20318 | True | 293 | lncRNA | 0.44 | 2 | 31096832 | 31097965 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC113547558 | LOC108268894,LOC108264971,LOC108273546,LOC108270747,LOC108257668,LOC108270753 | coding | downstream | 113917 | 30970017 ~ 30982915 (-) |
| LOC117595698 | NA | coding | downstream | 307422 | 30785963 ~ 30789410 (-) |
| trnah-gug | NA | coding | downstream | 463695 | 30633066 ~ 30633137 (-) |
| xrcc2 | xrcc2 | coding | downstream | 510142 | 30582017 ~ 30586690 (-) |
| kmt2ca | kmt2c | coding | downstream | 534919 | 30400155 ~ 30561913 (-) |
| ntng1a | ntng1,LOC102781425 | coding | upstream | 68461 | 31166426 ~ 31312036 (-) |
| prmt6 | prmt6 | coding | upstream | 227949 | 31325914 ~ 31327457 (-) |
| arhgap29a | arhgap29 | coding | upstream | 834504 | 31932469 ~ 31991048 (-) |
| trnar-ccg | NA | coding | upstream | 921130 | 32019095 ~ 32019167 (-) |
| trnar-ccg_1 | NA | coding | upstream | 980578 | 32078543 ~ 32078615 (-) |
| G17222 | NA | non-coding | downstream | 67155 | 31029456 ~ 31029677 (-) |
| LOC117598443 | telo2 | non-coding | downstream | 95154 | 30999480 ~ 31001678 (-) |
| G17025 | NA | non-coding | downstream | 207618 | 30841965 ~ 30889214 (-) |
| G17000 | NA | non-coding | downstream | 330123 | 30766189 ~ 30766709 (-) |
| LOC117596846 | NA | non-coding | downstream | 332355 | 30763585 ~ 30764477 (-) |
| G17277 | NA | non-coding | upstream | 28768 | 31126733 ~ 31130151 (-) |
| G17285 | NA | non-coding | upstream | 67046 | 31165011 ~ 31166371 (-) |
| G17338 | NA | non-coding | upstream | 214437 | 31312402 ~ 31312656 (-) |
| G17347 | NA | non-coding | upstream | 264265 | 31362230 ~ 31362461 (-) |
| LOC117598001 | NA | non-coding | upstream | 315792 | 31413757 ~ 31450541 (-) |
| telo2 | telo2 | other | downstream | 82183 | 30988123 ~ 31014649 (-) |
| G17199 | telo2 | other | downstream | 93523 | 31002409 ~ 31003309 (-) |
| G16900 | NA | other | downstream | 453858 | 30640698 ~ 30642974 (-) |
| gpr158a | gpr158 | other | downstream | 763612 | 30232323 ~ 30333220 (-) |
| pcolce2b | pcolce2,LOC108272785,LOC107566300,LOC107675309,LOC107588030 | other | downstream | 1282018 | 29797753 ~ 29814814 (-) |
| rnpc3 | rnpc3 | other | upstream | 486776 | 31584741 ~ 31611972 (-) |
| G17630 | LOC108267341 | other | upstream | 902660 | 32000625 ~ 32052554 (-) |
| G18097 | ift140 | other | upstream | 1491937 | 32589902 ~ 32596805 (-) |
| LOC113523757 | LOC108263642,LOC108270747,LOC108268894,LOC108263117,LOC108264948,LOC108268379,LOC108257668,LOC108261292 | other | upstream | 1801904 | 32899869 ~ 32955703 (-) |
| G18432 | NA | other | upstream | 2473414 | 33571379 ~ 33571830 (-) |
