G17631


Basic Information

Item Value
gene id G17631
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047595.1
NCBI id CM018541.1
chromosome length 35600603
location 32053783 ~ 32097778 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU20762
tctgacagttcctcaacctcagctacatcactccagttaataactggtctcaactagagatgtgtgccagactgttattatttttgtgcagttatttttgacctgtatctgacctttgatattttctaataaatttagtTGGTTTGATTTCCCATACTATAAACAAagtagtagcctaatttaaaccactgtgaccctgaccagcagTTCCTAAGGACGAATGaacaaacactgtaaacacatcATGTTAACGAACGTTATTTTTCTTTGTCCAGCAAACTCTCTGGATGGATCTCTGACCGCTCGATTGCAGCCGAAAGGAAAAACCTCCAGCTTTCATCCAAAACAACGCTAAtgttgaatgagctgttactatagaaacaaggTTATGTTAATATTTGGCCATGTCTAGTGATGAAAACTCTGTCACCTCGTTTATGGCCAGCTGCTCTCCTGCTCCTCCTGGATGAGGGAAGCGATGTCCTGAACTGCGTAGCTCCTCGTAAAGATCCTCTTCACTGCCAGCCTCATCACCTACACCCAGCTTCTCTGGAGCTCCGTCAGGAAGGATCACCCAGGGGAGGACATGCGTCGTCTCCAGCCGAGGCAGTCCAGCCCAATGGGGGTGCTGTGAGAGAAGCTCAGACTTCGGAGTGGCATTCCAGGAAACACTTTCAATGCACATAGAGACAACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU20762 True 695 lncRNA 0.45 2 32053783 32097778

Neighbor

gene id symbol gene type direction distance location
trnar-ccg NA coding downstream 34616 32019095 ~ 32019167 (-)
arhgap29a arhgap29 coding downstream 62735 31932469 ~ 31991048 (-)
prmt6 prmt6 coding downstream 726326 31325914 ~ 31327457 (-)
ntng1a ntng1,LOC102781425 coding downstream 741747 31166426 ~ 31312036 (-)
LOC113547558 LOC108268894,LOC108264971,LOC108273546,LOC108270747,LOC108257668,LOC108270753 coding downstream 1070868 30970017 ~ 30982915 (-)
LOC113547543 arhgap21,LOC107570046 coding upstream 17724 32115502 ~ 32187493 (-)
trnar-ccg_3 NA coding upstream 109847 32207625 ~ 32207697 (-)
prtfdc1a prtfdc1,unm_sa821,LOC107755703,LOC107588087,LOC107664644 coding upstream 122117 32219895 ~ 32237813 (-)
enkur enkur coding upstream 141162 32238940 ~ 32245611 (-)
LOC113547553 NA coding upstream 423842 32521620 ~ 32539347 (-)
G17498 NA non-coding downstream 155027 31898557 ~ 31898756 (-)
G17441 NA non-coding downstream 235146 31818258 ~ 31818637 (-)
G17426 NA non-coding downstream 307652 31743216 ~ 31746131 (-)
G17425 NA non-coding downstream 314334 31737829 ~ 31739449 (-)
G17422 NA non-coding downstream 318829 31718684 ~ 31734954 (-)
G17850 NA non-coding upstream 256082 32353860 ~ 32354074 (-)
LOC117597779 NA non-coding upstream 257418 32355196 ~ 32357754 (-)
G18087 NA non-coding upstream 440976 32538754 ~ 32608561 (-)
G18133 NA non-coding upstream 543577 32641355 ~ 32645315 (-)
G18136 NA non-coding upstream 552446 32650224 ~ 32650785 (-)
G17630 LOC108267341 other downstream 1229 32000625 ~ 32052554 (-)
rnpc3 rnpc3 other downstream 441811 31584741 ~ 31611972 (-)
telo2 telo2 other downstream 1039134 30988123 ~ 31014649 (-)
G17199 telo2 other downstream 1050474 31002409 ~ 31003309 (-)
G16900 NA other downstream 1410809 30640698 ~ 30642974 (-)
G18097 ift140 other upstream 492124 32589902 ~ 32596805 (-)
LOC113523757 LOC108263642,LOC108270747,LOC108268894,LOC108263117,LOC108264948,LOC108268379,LOC108257668,LOC108261292 other upstream 802091 32899869 ~ 32955703 (-)
G18432 NA other upstream 1473601 33571379 ~ 33571830 (-)
dnah3 dnah3,LOC108263105 other upstream 1474975 33572753 ~ 33616366 (-)
G18848 NA other upstream 1917270 34015048 ~ 34037333 (-)

Expression


Co-expression Network