Gene
RNA
| Item | Value |
|---|---|
| gene id | G17850 |
| gene name | NA |
| gene type | non-coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047595.1 |
| NCBI id | CM018541.1 |
| chromosome length | 35600603 |
| location | 32353860 ~ 32354074 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| description |
|---|
| PREDICTED: 26S proteasome non-ATPase regulatory subunit 2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU20998 | True | 215 | lncRNA | 0.33 | 1 | 32353860 | 32354074 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| enkur | enkur | coding | downstream | 108249 | 32238940 ~ 32245611 (-) |
| prtfdc1a | prtfdc1,unm_sa821,LOC107755703,LOC107588087,LOC107664644 | coding | downstream | 116047 | 32219895 ~ 32237813 (-) |
| trnar-ccg_3 | NA | coding | downstream | 146163 | 32207625 ~ 32207697 (-) |
| LOC113547543 | arhgap21,LOC107570046 | coding | downstream | 166367 | 32115502 ~ 32187493 (-) |
| trnar-ccg_2 | NA | coding | downstream | 267311 | 32086477 ~ 32086549 (-) |
| LOC113547553 | NA | coding | upstream | 167546 | 32521620 ~ 32539347 (-) |
| LOC113547549 | NA | coding | upstream | 208463 | 32562537 ~ 32575431 (-) |
| tmem204 | tmem204 | coding | upstream | 255945 | 32610019 ~ 32622734 (-) |
| fam234a | fam234a | coding | upstream | 333523 | 32687597 ~ 32696711 (-) |
| ccdc78 | LOC108269459 | coding | upstream | 522396 | 32876470 ~ 32895850 (-) |
| G17631 | NA | non-coding | downstream | 256082 | 32053783 ~ 32097778 (-) |
| G17498 | NA | non-coding | downstream | 455104 | 31898557 ~ 31898756 (-) |
| G17441 | NA | non-coding | downstream | 535223 | 31818258 ~ 31818637 (-) |
| G17426 | NA | non-coding | downstream | 607729 | 31743216 ~ 31746131 (-) |
| G17425 | NA | non-coding | downstream | 614411 | 31737829 ~ 31739449 (-) |
| LOC117597779 | NA | non-coding | upstream | 1122 | 32355196 ~ 32357754 (-) |
| G18087 | NA | non-coding | upstream | 184680 | 32538754 ~ 32608561 (-) |
| G18133 | NA | non-coding | upstream | 287281 | 32641355 ~ 32645315 (-) |
| G18136 | NA | non-coding | upstream | 296150 | 32650224 ~ 32650785 (-) |
| G18110 | NA | non-coding | upstream | 330443 | 32684517 ~ 32729038 (-) |
| G17630 | LOC108267341 | other | downstream | 301306 | 32000625 ~ 32052554 (-) |
| rnpc3 | rnpc3 | other | downstream | 741888 | 31584741 ~ 31611972 (-) |
| telo2 | telo2 | other | downstream | 1339211 | 30988123 ~ 31014649 (-) |
| G17199 | telo2 | other | downstream | 1350551 | 31002409 ~ 31003309 (-) |
| G16900 | NA | other | downstream | 1710886 | 30640698 ~ 30642974 (-) |
| G18097 | ift140 | other | upstream | 235828 | 32589902 ~ 32596805 (-) |
| LOC113523757 | LOC108263642,LOC108270747,LOC108268894,LOC108263117,LOC108264948,LOC108268379,LOC108257668,LOC108261292 | other | upstream | 545795 | 32899869 ~ 32955703 (-) |
| G18432 | NA | other | upstream | 1217305 | 33571379 ~ 33571830 (-) |
| dnah3 | dnah3,LOC108263105 | other | upstream | 1218679 | 33572753 ~ 33616366 (-) |
| G18848 | NA | other | upstream | 1660974 | 34015048 ~ 34037333 (-) |
