G18432


Basic Information

Item Value
gene id G18432
gene name NA
gene type unknown
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047595.1
NCBI id CM018541.1
chromosome length 35600603
location 33571379 ~ 33571830 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU21711
ctgtaattcaattcaattcaattcatttttatttgtatagcgctttttacaaaggtcattgtctcaaagcagctttacacaaacaaaagtaaagtgaagtgtgtgtgtgtgccgtctctgatgagcaagcagggcgacggtggcaaggaaaaactccctgagatggtgataggaagaaaccttgagaggaaccaggctcaacagagaacccatcctcatatgggtttacactgtagtgtgcgtgtgtgtgagcacaatgtgtgttggtgtagtccatggaaaacagctgaagcgttttcgtggcagtatgaagcattgccggtggacaggtcaagagtgaagggggggaggtctggatcaccggcagctcaggagtgtagctcggcagaaggagaaggaaagtggttaggtacactcacagtcaccgtgtggagataaaactcaacatccac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU21711 True 452 TUCP 0.47 1 33571379 33571830

Neighbor

gene id symbol gene type direction distance location
LOC113524634 LOC108268402 coding downstream 3746 33549287 ~ 33567633 (-)
LOC113524637 LOC108268628 coding downstream 25134 33531542 ~ 33546245 (-)
LOC117595702 LOC108270753,LOC108273692,LOC108257668,LOC108273544,LOC108273546,LOC108264948,LOC108273691,LOC108261167,LOC108412230 coding downstream 43581 33514495 ~ 33527798 (-)
LOC117595708 LOC108263642,LOC108270747,LOC108274210,LOC108273544,LOC108273692,LOC108270753,LOC108261406 coding downstream 64392 33499284 ~ 33506987 (-)
LOC113524648 LOC108270747,LOC108273219,LOC108261257,LOC108257668,LOC108273692,LOC108260129,LOC108274210 coding downstream 99112 33461778 ~ 33472267 (-)
kcnj12a kcnj12a,LOC108268745,LOC108413805 coding upstream 58208 33630038 ~ 33643243 (-)
ntn2 LOC108274409 coding upstream 148986 33720816 ~ 33746236 (-)
nog2 LOC108257885,LOC107734768,LOC107682132 coding upstream 197785 33769615 ~ 33771845 (-)
LOC117597391 LOC108272270 coding upstream 200489 33772319 ~ 33811365 (-)
LOC113525322 LOC108272270 coding upstream 254693 33826523 ~ 33846916 (-)
LOC113524631 NA non-coding downstream 73928 33493740 ~ 33497451 (-)
LOC117597603 NA non-coding downstream 83165 33486894 ~ 33488214 (-)
G18425 NA non-coding downstream 89554 33475421 ~ 33481825 (-)
G18412 LOC108268894,LOC108263642,LOC108261257,LOC108268260,LOC108273545,LOC108273219,LOC108270753,LOC108273691 non-coding downstream 116668 33413692 ~ 33454711 (-)
G18423 NA non-coding downstream 120459 33449578 ~ 33450920 (-)
G18446 NA non-coding upstream 147113 33718943 ~ 33719150 (-)
G18794 NA non-coding upstream 285878 33857708 ~ 33858166 (-)
G18796 NA non-coding upstream 288108 33859938 ~ 33860410 (-)
G18799 NA non-coding upstream 290372 33862202 ~ 33952846 (-)
G18839 NA non-coding upstream 407795 33979625 ~ 34049648 (-)
LOC113523757 LOC108263642,LOC108270747,LOC108268894,LOC108263117,LOC108264948,LOC108268379,LOC108257668,LOC108261292 other downstream 615676 32899869 ~ 32955703 (-)
G18097 ift140 other downstream 974574 32589902 ~ 32596805 (-)
G17630 LOC108267341 other downstream 1518825 32000625 ~ 32052554 (-)
rnpc3 rnpc3 other downstream 1959407 31584741 ~ 31611972 (-)
telo2 telo2 other downstream 2556730 30988123 ~ 31014649 (-)
dnah3 dnah3,LOC108263105 other upstream 923 33572753 ~ 33616366 (-)
G18848 NA other upstream 443218 34015048 ~ 34037333 (-)
LOC113524641 cox6b1,LOC108270924,LOC108413555,LOC107687105,LOC107556657,LOC107753036,LOC105926733,LOC107667149 other upstream 694474 34266304 ~ 34270306 (-)
G19006 LOC108270747,LOC108273692,LOC108263642,LOC108270753,LOC108273544,LOC108261406,LOC108264948 other upstream 712236 34284066 ~ 34998396 (-)
LOC117597397 LOC108274210,LOC108270753,LOC108261292,LOC108270747,LOC108257668,LOC108263642,LOC108273219,LOC108264971 other upstream 716732 34288562 ~ 34641985 (-)

Expression


Co-expression Network