Gene
RNA
| Item | Value |
|---|---|
| gene id | trnar-ccg |
| gene name | NA |
| gene type | coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047595.1 |
| NCBI id | CM018541.1 |
| chromosome length | 35600603 |
| location | 32019095 ~ 32019167 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| trnar-ccg | True | 73 | tRNA | 0.62 | 1 | 32019095 | 32019167 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| arhgap29a | arhgap29 | coding | downstream | 28047 | 31932469 ~ 31991048 (-) |
| prmt6 | prmt6 | coding | downstream | 691638 | 31325914 ~ 31327457 (-) |
| ntng1a | ntng1,LOC102781425 | coding | downstream | 707059 | 31166426 ~ 31312036 (-) |
| LOC113547558 | LOC108268894,LOC108264971,LOC108273546,LOC108270747,LOC108257668,LOC108270753 | coding | downstream | 1036180 | 30970017 ~ 30982915 (-) |
| LOC117595698 | NA | coding | downstream | 1229685 | 30785963 ~ 30789410 (-) |
| trnar-ccg_1 | NA | coding | upstream | 59376 | 32078543 ~ 32078615 (-) |
| trnar-ucg | NA | coding | upstream | 66562 | 32085729 ~ 32085801 (-) |
| trnar-ccg_2 | NA | coding | upstream | 67310 | 32086477 ~ 32086549 (-) |
| LOC113547543 | arhgap21,LOC107570046 | coding | upstream | 96335 | 32115502 ~ 32187493 (-) |
| trnar-ccg_3 | NA | coding | upstream | 188458 | 32207625 ~ 32207697 (-) |
| G17498 | NA | non-coding | downstream | 120339 | 31898557 ~ 31898756 (-) |
| G17441 | NA | non-coding | downstream | 200458 | 31818258 ~ 31818637 (-) |
| G17426 | NA | non-coding | downstream | 272964 | 31743216 ~ 31746131 (-) |
| G17425 | NA | non-coding | downstream | 279646 | 31737829 ~ 31739449 (-) |
| G17421 | NA | non-coding | downstream | 290866 | 31721110 ~ 31728229 (-) |
| G17631 | NA | non-coding | upstream | 34616 | 32053783 ~ 32097778 (-) |
| G17850 | NA | non-coding | upstream | 334693 | 32353860 ~ 32354074 (-) |
| LOC117597779 | NA | non-coding | upstream | 336029 | 32355196 ~ 32357754 (-) |
| G18087 | NA | non-coding | upstream | 519587 | 32538754 ~ 32608561 (-) |
| G18133 | NA | non-coding | upstream | 622188 | 32641355 ~ 32645315 (-) |
| rnpc3 | rnpc3 | other | downstream | 407123 | 31584741 ~ 31611972 (-) |
| telo2 | telo2 | other | downstream | 1004446 | 30988123 ~ 31014649 (-) |
| G17199 | telo2 | other | downstream | 1015786 | 31002409 ~ 31003309 (-) |
| G16900 | NA | other | downstream | 1376121 | 30640698 ~ 30642974 (-) |
| gpr158a | gpr158 | other | downstream | 1685875 | 30232323 ~ 30333220 (-) |
| G18097 | ift140 | other | upstream | 570735 | 32589902 ~ 32596805 (-) |
| LOC113523757 | LOC108263642,LOC108270747,LOC108268894,LOC108263117,LOC108264948,LOC108268379,LOC108257668,LOC108261292 | other | upstream | 880702 | 32899869 ~ 32955703 (-) |
| G18432 | NA | other | upstream | 1552212 | 33571379 ~ 33571830 (-) |
| dnah3 | dnah3,LOC108263105 | other | upstream | 1553586 | 33572753 ~ 33616366 (-) |
| G18848 | NA | other | upstream | 1995881 | 34015048 ~ 34037333 (-) |
