G91752



Basic Information


Item Value
gene id G91752
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_047600.1
NCBI id CM018546.1
chromosome length 31307711
location 53728 ~ 63274 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence


>TU108814
acaacaacaacaacaacaataataataacaataataataataataataaacttttcttACATGTGGCAGCTCAGAGTGCTGTACAATcaagtcattaaaaataaaatgataaagtaatgtaataataacagtaatgtaACAGAGTGCACAAGTAGGGCTGGGTGATACGACGATATAAAATccatatcgtgataaattatgtcacaggTATCGTattgtctttttcattttttgttttgtgtaaataataacaaactGCAG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU108814 True 261 lncRNA 0.28 2 53728 63274

Neighbor


gene id symbol gene type direction distance location
LOC113534766 mapk6,LOC107747613,LOC107550634,LOC107704268,LOC107700590,LOC107588533 coding downstream 34159 6409 ~ 19569 (-)
scg3 scg3,LOC107700587,LOC107550625,LOC107588544 coding upstream 53289 116563 ~ 136463 (-)
LOC113534665 NA coding upstream 76996 140270 ~ 141515 (-)
LOC117597506 NA coding upstream 90793 154067 ~ 155144 (-)
LOC117597586 NA coding upstream 113839 177113 ~ 177644 (-)
tnfaip8l3 tnfaip8l3,LOC107746937,LOC107588557,LOC107700582,LOC107704263,LOC107550628 coding upstream 135699 198973 ~ 223384 (-)
G91764 NA non-coding upstream 21021 84295 ~ 85545 (-)
G91786 LOC108237865,LOC106563385,LOC106560410,LOC106599233,LOC106566551,LOC106561221,LOC106564134,LOC106572279 non-coding upstream 120260 183534 ~ 183796 (-)
G91873 NA non-coding upstream 235273 298547 ~ 299097 (-)
G92197 NA non-coding upstream 329758 393032 ~ 395264 (-)
LOC117597554 NA non-coding upstream 426288 489562 ~ 490796 (-)
LOC113534658 NA other upstream 80151 143425 ~ 144961 (-)
dmxl2 dmxl2 other upstream 202933 266207 ~ 323940 (-)
G92240 NA other upstream 643476 706750 ~ 747530 (-)
usp8 LOC107665382,LOC107595392 other upstream 719636 782910 ~ 802212 (-)
slc27a2a LOC108264486 other upstream 771842 835116 ~ 846935 (-)

Expression



Co-expression Network