Gene
RNA
| Item | Value |
|---|---|
| gene id | G92592 |
| gene name | NA |
| gene type | non-coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047600.1 |
| NCBI id | CM018546.1 |
| chromosome length | 31307711 |
| location | 1861949 ~ 1862414 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU110073 | True | 466 | lncRNA | 0.45 | 1 | 1861949 | 1862414 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| slc24a5 | slc24a5,LOC108412301 | coding | downstream | 275579 | 1566571 ~ 1586370 (-) |
| LOC113525461 | slc12a1,LOC108412716,LOC107739981 | coding | downstream | 369922 | 1478928 ~ 1492027 (-) |
| dut | dut,LOC102779749 | coding | downstream | 392278 | 1462743 ~ 1469671 (-) |
| LOC113526639 | LOC108264476,LOC108412674,LOC107381730 | coding | downstream | 547294 | 1294052 ~ 1314655 (-) |
| spata5l1 | spata5l1 | coding | downstream | 627323 | 1227607 ~ 1234626 (-) |
| bcl2l10 | NA | coding | upstream | 2169 | 1864583 ~ 1876045 (-) |
| gnb5b | gnb5,gnb5b,LOC107588534,LOC107700591,LOC107704270,LOC106562494 | coding | upstream | 19417 | 1881831 ~ 1904411 (-) |
| myo5aa | myo5a,myo5aa | coding | upstream | 44104 | 1906518 ~ 1984333 (-) |
| arpp19a | arpp19,LOC108264505,LOC108413875,LOC103358163 | coding | upstream | 124959 | 1987373 ~ 1992487 (-) |
| LOC113534648 | LOC108264479 | coding | upstream | 157443 | 2019857 ~ 2033455 (-) |
| G92576 | NA | non-coding | downstream | 2078 | 1859594 ~ 1859871 (-) |
| G92560 | NA | non-coding | downstream | 20727 | 1840259 ~ 1841222 (-) |
| G92540 | NA | non-coding | downstream | 58146 | 1803578 ~ 1803803 (-) |
| G92525 | NA | non-coding | downstream | 165505 | 1696179 ~ 1696444 (-) |
| G92512 | NA | non-coding | downstream | 200106 | 1661442 ~ 1661843 (-) |
| LOC117597531 | NA | non-coding | upstream | 14551 | 1876965 ~ 1880573 (-) |
| LOC117597579 | NA | non-coding | upstream | 309460 | 2171874 ~ 2173454 (-) |
| G92763 | NA | non-coding | upstream | 361770 | 2224184 ~ 2224457 (-) |
| LOC117597578 | NA | non-coding | upstream | 378024 | 2240438 ~ 2260923 (-) |
| G92782 | NA | non-coding | upstream | 439692 | 2302106 ~ 2302430 (-) |
| G92531 | NA | other | downstream | 93154 | 1768405 ~ 1768795 (-) |
| sema6dl | sema6d | other | downstream | 213663 | 1611811 ~ 1648286 (-) |
| LOC113525562 | slc12a1,LOC108412716,LOC108229397 | other | downstream | 330887 | 1515738 ~ 1531062 (-) |
| bloc1s6 | bloc1s6 | other | downstream | 569456 | 1197135 ~ 1292493 (-) |
| LOC113534649 | LOC108264477 | other | upstream | 132617 | 1995031 ~ 2014965 (-) |
| fam214a | fam214a | other | upstream | 173527 | 2035941 ~ 2130790 (-) |
| onecut1 | onecut1 | other | upstream | 229320 | 2091734 ~ 2109935 (-) |
| G93046 | NA | other | upstream | 886974 | 2749388 ~ 2751169 (-) |
| G93047 | NA | other | upstream | 897198 | 2759612 ~ 2768298 (-) |
