G93047


Basic Information

Item Value
gene id G93047
gene name NA
gene type unknown
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047600.1
NCBI id CM018546.1
chromosome length 31307711
location 2759612 ~ 2768298 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU110621
GAGCACTGTAAGGAGGTGTGTTAATGAGGCTCGATGGTGCTGCTAGAGTTATGCCAGGTTTTTCACCGGGCCATTGGTCAGGTTATAGCTCGTAATAATTCATTGTAATGATTGTAACTTTTTATTACCTCATGCTGCAcctgcatccacacacacacacacacacacacacacgtatacacagagagagaaagagaggaagagagagagagggagagttcTGGCACACCTGTTGCCAGGTAgtagaaaattaaacatattaaataagtCGGTGCATTGGTattggaaatatatatataaaataaaggtttctgctacaaaaatggaaatgtagacCTGCtaacctttacacattttgagTAGGAgcacaacattttaacattggaGTATGCTGCTGTGAGGCAACACGGCAAAGCTACAAGTTATCAGTCAGTAATATGCCAAAAgtacgagttatcactcaaaaacacagcaaatgcACGAGTTATCACTCAAGATTACACAAAAACCATGAGTTATCACACAAAATACACCAAATATATGAGTTATTgctcaaaaacacagcaaatgtATGTTATCACTCAAATttacgagttatcactcaaaaacacagcaaatgtacgagttatcactcaaaaacacagcaaatgtacatgttatcactcaaaaacagcaaatgtacatgttatcactcaaaaacacagcaaatgtacgagttatcactcaaaaacacagcaaatgcacgagttatcactcaaaaacacagcaaatgtacgagttatcactcaaaaacacagcaaatgtacgagttatcactcaaaaacacagcaaatgcacgagttatcactcaaaaacacagcaaatg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU110621 True 865 TUCP 0.37 2 2759612 2768298

Neighbor

gene id symbol gene type direction distance location
prtga prtg coding downstream 37590 2681280 ~ 2722022 (-)
pygo1 pygo1 coding downstream 84922 2670950 ~ 2674690 (-)
dnaaf4 dyx1c1 coding downstream 88743 2659703 ~ 2670869 (-)
ccpg1 ccpg1 coding downstream 103105 2639864 ~ 2656507 (-)
rab27a rab27a,LOC106562223,LOC106587426 coding downstream 135787 2599541 ~ 2623825 (-)
LOC113534652 NA coding upstream 20564 2788862 ~ 2791363 (-)
pepd pepd coding upstream 31325 2799623 ~ 2860959 (-)
LOC113534544 LOC108264856 coding upstream 279962 3048260 ~ 3053195 (-)
LOC113534536 LOC108264856,LOC108432364 coding upstream 288406 3056704 ~ 3061495 (-)
LOC113534302 LOC108264856,LOC108432364 coding upstream 296372 3064670 ~ 3068301 (-)
G93036 NA non-coding downstream 121611 2637007 ~ 2638001 (-)
G93028 NA non-coding downstream 132889 2625924 ~ 2626723 (-)
G93023 NA non-coding downstream 153234 2587586 ~ 2606378 (-)
G92782 NA non-coding downstream 457182 2302106 ~ 2302430 (-)
LOC117597578 NA non-coding downstream 498689 2240438 ~ 2260923 (-)
LOC113534492 NA non-coding upstream 138029 2906327 ~ 2918822 (-)
G93231 NA non-coding upstream 326410 3094708 ~ 3094939 (-)
G93342 NA non-coding upstream 431088 3199386 ~ 3200701 (-)
G93349 NA non-coding upstream 443293 3211591 ~ 3211804 (-)
G93350 NA non-coding upstream 443570 3211868 ~ 3212123 (-)
G93046 NA other downstream 8443 2749388 ~ 2751169 (-)
fam214a fam214a other downstream 628822 2035941 ~ 2130790 (-)
onecut1 onecut1 other downstream 649677 2091734 ~ 2109935 (-)
LOC113534649 LOC108264477 other downstream 744647 1995031 ~ 2014965 (-)
G92531 NA other downstream 990817 1768405 ~ 1768795 (-)
kcnab1a kcnab1,kcnab1a,LOC108263953,LOC107675612,LOC107566585 other upstream 657420 3425718 ~ 3548751 (-)
LOC117597611 LOC108264121,LOC108264120,LOC108264117 other upstream 1302502 4070800 ~ 4073533 (-)
G93711 LOC101487076 other upstream 1404990 4173288 ~ 4173594 (-)
LOC113534736 LOC108264124,LOC108434067,LOC108434089,LOC108434035,LOC108434036,LOC103037408,LOC108434043,LOC108264108,LOC108264111,LOC108264104,LOC108434059 other upstream 1448720 4217018 ~ 4220607 (-)
ss18l2 ss18l2,s18l2 other upstream 2871398 5639696 ~ 5642949 (-)

Expression


Co-expression Network