G93707


Basic Information

Item Value
gene id G93707
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047600.1
NCBI id CM018546.1
chromosome length 31307711
location 4155257 ~ 4155497 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU111357
aaacaacgtttctccaggaccaaggtgctacataagacaacacagaacaacatagaactacggggactacataaattacataaattaaacgtaaagtgcacaagtgcaaacatgtgcagacagcacaagacagaacagacagtacataactacgacgccgaccagtacacagtcctgttgaaagtgataaggtgacagtagtgcaaatattacagctgaggtagtgtaaacagtgtaaaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU111357 True 241 lncRNA 0.41 1 4155257 4155497

Neighbor

gene id symbol gene type direction distance location
LOC113534616 LOC108264115,LOC108434087 coding downstream 5847 4143231 ~ 4149410 (-)
LOC113534615 LOC108264116,LOC108434034,LOC108264184,LOC108264127,LOC108264128,LOC108264136,LOC108264183 coding downstream 14655 4137160 ~ 4140602 (-)
LOC117597529 NA coding downstream 21197 4131265 ~ 4134060 (-)
LOC113534739 LOC108264121,LOC108264117 coding downstream 28476 4123822 ~ 4126781 (-)
LOC113534596 LOC108264119,LOC107707879,LOC107557164 coding downstream 42334 4109671 ~ 4112923 (-)
LOC113534737 LOC108264111,LOC108264124,LOC108434067,LOC108434036,LOC108264109,LOC108434043,LOC103037408,LOC108264189 coding upstream 36188 4191685 ~ 4195052 (-)
LOC117597613 NA coding upstream 70734 4226231 ~ 4231317 (-)
LOC113534733 LOC108434066,LOC108264124,LOC108263989,LOC108434049,LOC108434059,LOC108434091,LOC108434067,LOC108264112,LOC108264111 coding upstream 100820 4256317 ~ 4270798 (-)
LOC117597527 LOC108264109,LOC108264108,LOC108264124,LOC108264193,LOC108263989,LOC108434035,LOC108434067,LOC108264189,LOC108264102 coding upstream 113982 4269479 ~ 4273667 (-)
LOC117597581 LOC108264109,LOC108264108,LOC108264193,LOC108263989,LOC108264124,LOC108434035,LOC108264189,LOC108264106,LOC108434067 coding upstream 138558 4294055 ~ 4297771 (-)
LOC113534402 NA non-coding downstream 208881 3944987 ~ 3946376 (-)
G93639 NA non-coding downstream 419865 3735097 ~ 3735392 (-)
G93557 NA non-coding downstream 574051 3579017 ~ 3581206 (-)
G93505 NA non-coding downstream 700886 3425023 ~ 3454371 (-)
LOC117597513 NA non-coding downstream 733099 3406145 ~ 3422158 (-)
G93710 NA non-coding upstream 16576 4172073 ~ 4172312 (-)
G93716 NA non-coding upstream 28258 4183755 ~ 4183993 (-)
LOC117597614 NA non-coding upstream 75963 4231460 ~ 4231831 (-)
G93753 NA non-coding upstream 390942 4546439 ~ 4546705 (-)
G93896 NA non-coding upstream 628428 4783925 ~ 4785131 (-)
LOC117597611 LOC108264121,LOC108264120,LOC108264117 other downstream 81724 4070800 ~ 4073533 (-)
kcnab1a kcnab1,kcnab1a,LOC108263953,LOC107675612,LOC107566585 other downstream 606506 3425718 ~ 3548751 (-)
G93047 NA other downstream 1386959 2759612 ~ 2768298 (-)
G93046 NA other downstream 1404088 2749388 ~ 2751169 (-)
fam214a fam214a other downstream 2024467 2035941 ~ 2130790 (-)
G93711 LOC101487076 other upstream 17791 4173288 ~ 4173594 (-)
LOC113534736 LOC108264124,LOC108434067,LOC108434089,LOC108434035,LOC108434036,LOC103037408,LOC108434043,LOC108264108,LOC108264111,LOC108264104,LOC108434059 other upstream 61521 4217018 ~ 4220607 (-)
ss18l2 ss18l2,s18l2 other upstream 1484199 5639696 ~ 5642949 (-)
LOC113534829 kctd15,LOC107668486,LOC107712586,LOC107658979,LOC107099506 other upstream 1558346 5713843 ~ 5786431 (-)
clmpb LOC108264733,LOC107733295,LOC108434152,LOC107692491,LOC107670645,LOC107602112,LOC107717607 other upstream 2041746 6197243 ~ 6281530 (-)

Expression


Co-expression Network