G95835


Basic Information

Item Value
gene id G95835
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047600.1
NCBI id CM018546.1
chromosome length 31307711
location 7984714 ~ 7984930 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU113772
CTCAGACCTTACACAACATGCTGCTAgatggattggtgactctaatgctgcatttgacttaccccagaagtgggaagtcagaaCTAGTAATCACATTATATTAGACCTCCatgcattcaagctacaaagtgggggaaaaaaacatggatgccactatgtttgtcttttgttagaaACAAACCAGCCAGCTAAATAtcatgagtgatgtatattttcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU113772 True 217 lncRNA 0.40 1 7984714 7984930

Neighbor

gene id symbol gene type direction distance location
frmd4a frmd4a,si:ch211-220f12.1,LOC107559478 coding downstream 7797 7847835 ~ 7976917 (-)
bend7 bend7 coding downstream 155708 7818508 ~ 7829006 (-)
sephs1 sephs1,LOC107719963,LOC107671154 coding downstream 167117 7810212 ~ 7817597 (-)
mapk8ip2 mapk8ip2 coding downstream 204316 7729088 ~ 7780398 (-)
LOC113534276 LOC108264749,LOC108264750 coding downstream 559133 7421972 ~ 7425581 (-)
prrt4 prrt4 coding upstream 60497 8045427 ~ 8060973 (-)
lepa LOC100304688,LOC108442790 coding upstream 102506 8087436 ~ 8113093 (-)
LOC113534270 cacna2d1,LOC107672590,LOC107738419 coding upstream 508059 8492989 ~ 8594273 (-)
pclob LOC108264083,LOC107738431 coding upstream 623087 8608017 ~ 8687641 (-)
sema3e sema3e,LOC107563409,LOC107559846 coding upstream 717801 8702731 ~ 8742563 (-)
G95815 NA non-coding downstream 34752 7949762 ~ 7949962 (-)
G95785 NA non-coding downstream 111400 7872733 ~ 7873314 (-)
G95783 NA non-coding downstream 122908 7861522 ~ 7861806 (-)
G95773 NA non-coding downstream 125685 7820390 ~ 7859029 (-)
G95752 NA non-coding downstream 190708 7716589 ~ 7794006 (-)
LOC117597533 NA non-coding upstream 24197 8009127 ~ 8013412 (-)
LOC117597532 NA non-coding upstream 29225 8014155 ~ 8016621 (-)
G95907 NA non-coding upstream 95286 8080216 ~ 8083572 (-)
LOC113534629 NA non-coding upstream 341901 8326831 ~ 8344658 (-)
G96166 NA non-coding upstream 627885 8612815 ~ 8613014 (-)
shank3a shank3,shank3a other downstream 290287 7438091 ~ 7694427 (-)
LOC113534453 LOC108264337,LOC108264339 other downstream 827226 7146500 ~ 7157488 (-)
clmpb LOC108264733,LOC107733295,LOC108434152,LOC107692491,LOC107670645,LOC107602112,LOC107717607 other downstream 1703184 6197243 ~ 6281530 (-)
LOC113534829 kctd15,LOC107668486,LOC107712586,LOC107658979,LOC107099506 other downstream 2198283 5713843 ~ 5786431 (-)
ss18l2 ss18l2,s18l2 other downstream 2341765 5639696 ~ 5642949 (-)
LOC113534821 LOC108264660,LOC108443050 other upstream 410882 8395812 ~ 8478337 (-)
cotl1 cotl1,LOC107559813,LOC107722478 other upstream 1189725 9174655 ~ 9215815 (-)
LOC113534661 NA other upstream 1765952 9750882 ~ 9772020 (-)
tmtc2b LOC108264714,LOC108414015,LOC107673141,LOC107738412,LOC107670376,LOC107722480 other upstream 1837303 9822233 ~ 9918481 (-)
ttc38 ttc38,LOC107722483,LOC107673144,LOC107587045 other upstream 2282048 10266978 ~ 10294823 (-)

Expression


Co-expression Network