G106356


Basic Information

Item Value
gene id G106356
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047600.1
NCBI id CM018546.1
chromosome length 31307711
location 28097773 ~ 28097994 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU125776
gttggagcgtggctgtggggatttgtgttcattcagctacaagagcattagtgagatcaggcgctgatgttggtgaggaggtctggggttcagtcagtgttccagttcatcccaaaggtgttcagtggggttgaggtcagggctctgtgcaggacactcgagttcttccactccaaccttcacacaccatgtcttcatggagcttgctttgtgcacaggggc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU125776 True 222 lncRNA 0.53 1 28097773 28097994

Neighbor

gene id symbol gene type direction distance location
LOC113526894 LOC108263898 coding downstream 157951 27925890 ~ 27939822 (-)
zdhhc7 zdhhc7,LOC108435925,LOC107573093,LOC107705792,LOC107736389,LOC107686620,LOC107601043 coding downstream 219154 27865109 ~ 27878619 (-)
cog8 cog8,LOC107686577,LOC107573089,LOC107600188 coding downstream 238412 27854836 ~ 27859361 (-)
wdr59 wdr59,LOC107686576 coding downstream 250951 27825324 ~ 27846822 (-)
glg1b glg1,LOC107686575,LOC107705797,LOC107573092,LOC105906547 coding downstream 274547 27781821 ~ 27823226 (-)
LOC113526564 dbndd1 coding upstream 85539 28183533 ~ 28205626 (-)
foxf1 foxf1 coding upstream 131444 28229438 ~ 28233387 (-)
irf8 irf8 coding upstream 317141 28415135 ~ 28422985 (-)
dusp22a ds22a,LOC105892932,LOC108434600,LOC106562285 coding upstream 325803 28423797 ~ 28446938 (-)
LOC113526963 LOC108264246,LOC107731261,LOC107663352,LOC107565335,LOC107572641,LOC108412231,LOC103374647 coding upstream 350745 28448739 ~ 28452315 (-)
G106319 NA non-coding downstream 18898 28038090 ~ 28078875 (-)
G106336 NA non-coding downstream 26903 28069599 ~ 28070870 (-)
G106269 NA non-coding downstream 129572 27967982 ~ 27968201 (-)
G106265 NA non-coding downstream 131522 27965063 ~ 27966251 (-)
G106264 NA non-coding downstream 133763 27963771 ~ 27964010 (-)
LOC117597514 NA non-coding upstream 161703 28259697 ~ 28261304 (-)
G106653 NA non-coding upstream 502125 28600119 ~ 28601535 (-)
G106655 NA non-coding upstream 506319 28604313 ~ 28605437 (-)
G106656 NA non-coding upstream 508264 28606258 ~ 28608041 (-)
G106657 NA non-coding upstream 510952 28608946 ~ 28609764 (-)
si:dkey-151j17.4 NA other downstream 937674 27144888 ~ 27160099 (-)
LOC113526510 LOC108264700,LOC108261657 other downstream 1489434 26569085 ~ 26608339 (-)
G105376 NA other downstream 1856768 26239330 ~ 26241005 (-)
si:cabz01090165.1 zmp:0000001073,LOC108264041,LOC108429879,LOC107692477,LOC107722287,LOC107566287,LOC107713869 other downstream 2548845 25385325 ~ 25548928 (-)
tmem91 tmem91,LOC107676753,LOC107757682,LOC107758240 other downstream 3018261 25043786 ~ 25079512 (-)
hipk3b hipk3,LOC108264637 other upstream 1522805 29620799 ~ 29714001 (-)
G107525 NA other upstream 2245537 30343531 ~ 30344876 (-)
bbs10 bbs10 other upstream 2630050 30728044 ~ 30732059 (-)
selenot1b LOC108264179,LOC108429894 other upstream 2687599 30785593 ~ 30849697 (-)
G107803 NA other upstream 2718585 30816579 ~ 30820422 (-)

Expression


Co-expression Network