G107525


Basic Information

Item Value
gene id G107525
gene name NA
gene type unknown
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047600.1
NCBI id CM018546.1
chromosome length 31307711
location 30343531 ~ 30344876 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU127077
GGGATATTTCAGCTCGAGTTTCTCCATAAACACCTGCACCAAAGCCGtcacttctgattggctgatcagcAGATTTCCACTCACGTTACAGTTCAGGTCTATCCAATCAGTCCTCAGCGCCTGAAAGTCTGTCTGACCGACCTGAAACGTCTGATCCCATCTGATCTCAGGGTCATACTCAGCCTTGCTCACGACCCCGGCCTCCATCTCCGAGTCTCCGTATATGACCCACAGGTCTGTGCTGTCGTTAGTGAGTTCTTTATGCGTTTTGGCTCCGCCCCTATTCACAAAGTCTCCGCCTTTCCCCAATGCAGAGTTGCCGGTGTGTACAGGAGGAGGAGGGTTGGTGTATTTGCCCTGGTGGACGTTGCCATGACGATATTTCTGATGGATGGAATCATCTTCAGGAGGCTGAGGGTCCTCATGCTTTGACGCGGAAAGAAAGATATTCCTTGTGCCATTTTTCGGTCCGTTAATAACATGCGGTTTTGCTCCTGATCTCTGATCCTGGATTGGAGCTTTATCTTCTTGCTTCATATGATTCACTTGACCAATAGGTTCTTTATCTTCTTTCTGACCAGGAATTTCAGCCTTCCGTCCAAATTGTTGGTTCTTGTagtccattttgttttgttttcgcAGTTTATGTTGGTTCTCGTCAgcagttttgttttggttttgcacATTATGTTGGTTCTTGTCGGCCATTTTGGTTTGGTTTCGCAGCTTATTTTGGTTCTCttccactgttttgttttggttttgcagTTTATATTGGTTCTCGATGgccattttcttttgttttcgcAGTTTACGTTGGTTCTTGTTGgccattttgttttggttttgcagTTTATTTTGGTTCTgatcagccattttggtttggttttgcaGCTTATTTTGGTTCTCCTTCTCTGATACTGATCCATTACCTCGTGCCAGGTTCTCCTGCTGCACTGTCTCTATTCTGTTCATATTGTGTTGGTTTGTCCTCCTTCTTCTACTCACGTTCTTCTTGTTCAGTGAGTTAGAGAAGAGTTTCCTTTGTTGGCGCTGTATGTAGTCATCACGGTAGTCAAATTCATCCTCGTCTTCCATCTCCTCGTCCTGTCCTCTGAACTCCTTCCATCCCGCCC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU127077 True 1136 TUCP 0.45 2 30343531 30344876

Neighbor

gene id symbol gene type direction distance location
tspan4a tspan4,LOC106561924 coding downstream 87447 30137011 ~ 30256084 (-)
luzp2 luzp2,LOC107746562,LOC107739427,LOC107656854 coding downstream 279165 29971467 ~ 30064366 (-)
lrch3 lrch3,LOC103027580 coding downstream 576784 29727090 ~ 29766747 (-)
kiaa1549lb LOC108264854,LOC108433503 coding downstream 685722 29599585 ~ 29657809 (-)
spon1a spon1,spon1a,LOC107741890 coding downstream 864099 29398604 ~ 29479432 (-)
tnni1c tnni1,tnni1c,LOC107564917,LOC107705806,LOC107686571,LOC108423488 coding upstream 10645 30355521 ~ 30359530 (-)
miox miox,LOC107705808,LOC107686568,LOC102303880 coding upstream 82304 30427180 ~ 30433055 (-)
adm2b LOC108264181 coding upstream 92153 30437029 ~ 30444319 (-)
LOC113526499 LOC108264175 coding upstream 107831 30452707 ~ 30464074 (-)
ppp6r2b ppp6r2 coding upstream 125084 30469960 ~ 30489913 (-)
G107510 NA non-coding downstream 31685 30309847 ~ 30311846 (-)
G107217 NA non-coding downstream 420338 29922742 ~ 29923193 (-)
G107210 NA non-coding downstream 498674 29765376 ~ 29844857 (-)
G107191 NA non-coding downstream 619154 29724114 ~ 29724377 (-)
G107193 NA non-coding downstream 635631 29680263 ~ 29707900 (-)
G107532 NA non-coding upstream 18751 30363627 ~ 30391458 (-)
G107533 NA non-coding upstream 23462 30368338 ~ 30369188 (-)
G107536 NA non-coding upstream 24011 30368887 ~ 30406964 (-)
G107574 NA non-coding upstream 76376 30421252 ~ 30423338 (-)
G107550 NA non-coding upstream 98647 30443523 ~ 30469903 (-)
hipk3b hipk3,LOC108264637 other downstream 629530 29620799 ~ 29714001 (-)
si:dkey-151j17.4 NA other downstream 3183432 27144888 ~ 27160099 (-)
LOC113526510 LOC108264700,LOC108261657 other downstream 3735192 26569085 ~ 26608339 (-)
G105376 NA other downstream 4102526 26239330 ~ 26241005 (-)
si:cabz01090165.1 zmp:0000001073,LOC108264041,LOC108429879,LOC107692477,LOC107722287,LOC107566287,LOC107713869 other downstream 4794603 25385325 ~ 25548928 (-)
bbs10 bbs10 other upstream 383168 30728044 ~ 30732059 (-)
selenot1b LOC108264179,LOC108429894 other upstream 440717 30785593 ~ 30849697 (-)
G107803 NA other upstream 471703 30816579 ~ 30820422 (-)
LOC113524890 LOC108264167 other upstream 574308 30919184 ~ 30989204 (-)

Expression


Co-expression Network