dut (dut,LOC102779749)


Basic Information

Item Value
gene id dut
gene name dut,LOC102779749
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047600.1
NCBI id CM018546.1
chromosome length 31307711
location 1462743 ~ 1469671 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026911983.2
TGAAGGCAGAACTGTCACCACTGCGCAGATTCAGTTTGTGCACACAGCACTGCTAGTGTAGAGTGAAGCGCTGGCTGTCTGTCGCCATTAATCCTGAAGCAACATGAGTGGATCACTTTAATCAGcatgttttctctctcctttgtgAAGGCTGTGCTTTATAGCGGTcagagactgacacagagaagATGCTTTTCTTCACACAGAAACGGTAAAATGCCGTGCTCAGAAGTGACAGACGCGACCTCAGTGTCCCCTATGAAGAAGAGCAGGACTGAGGAGATGAATGAAAATAGCGGTAGCATCGTGCTAAAGTTCGCTAAACTGTCTGAACACGCCACAACACCGACCAGAGGCTCTGCTAAAGCCGCCGGATACGACCTGTACAGTGCGTATGATTACACCATTGCGCCGATGGACAAGGCCATCGTGAAGACGGACATCCAGATCGCTGTTCCTGCAGGATGCTACGGCCGAGTGGCTCCTCGCTCAGGTCTGGCAGCGAAGCACTTTATCGATGTTGGAGCCGGCGTGGTGGATGAGGACTACAGAGGAAACGTTGGAGTCGTGCTGTTCAACTTCGGCAAGGAGACGTTTGAAGTGAAAAAAGGAGACCGAGTGGCTCAGCTAGTGTGTGAGCGGATCTGCTATCCTGACCTACAGGAGCTCAAGAGTCTGGATGAGACGGAGAGGGGCGCTGGGGGATTCGGCTCCACTGGGAGGAACTGAAACTGCTGctcttttacttttctttgtttaaataaaacttttttttgtaataaatctGTTACAGACGTCGTGTGGTCACCAAATGAGTTTAGTGCTGGTGTTCTGCTTTAGGCCACCAGGTGGTGCTGCTAGTAGTGTTAGCTTAAATTCA
>XM_026911984.2
TTGGTTAAAAAAAGGCGCGAGGATGTGGTCTGCTCTTGCGCGCGCCCTTTAAATGCGCGTGAGCAGAAGGAGATTAGCGCGGGAATCTTGGCGGCGACTCTGTAAAATGCCGTGCTCAGAAGTGACAGACGCGACCTCAGTGTCCCCTATGAAGAAGAGCAGGACTGAGGAGATGAATGAAAATAGCGGTAGCATCGTGCTAAAGTTCGCTAAACTGTCTGAACACGCCACAACACCGACCAGAGGCTCTGCTAAAGCCGCCGGATACGACCTGTACAGTGCGTATGATTACACCATTGCGCCGATGGACAAGGCCATCGTGAAGACGGACATCCAGATCGCTGTTCCTGCAGGATGCTACGGCCGAGTGGCTCCTCGCTCAGGTCTGGCAGCGAAGCACTTTATCGATGTTGGAGCCGGCGTGGTGGATGAGGACTACAGAGGAAACGTTGGAGTCGTGCTGTTCAACTTCGGCAAGGAGACGTTTGAAGTGAAAAAAGGAGACCGAGTGGCTCAGCTAGTGTGTGAGCGGATCTGCTATCCTGACCTACAGGAGCTCAAGAGTCTGGATGAGACGGAGAGGGGCGCTGGGGGATTCGGCTCCACTGGGAGGAACTGAAACTGCTGctcttttacttttctttgtttaaataaaacttttttttgtaataaatctGTTACAGACGTCGTGTGGTCACCAAATGAGTTTAGTGCTGGTGTTCTGCTTTAGGCCACCAGGTGGTGCTGCTAGTAGTGTTAGCTTAAATTCA
>XM_026911985.2
ATAGCGTCACATCAGCGTCATATCAGCGTCGTATCATTGGTTAAAAAAAGGCGCGAGGATGTGGTCTGCTCTTGCGCGCGCCCTTTAAATGCGCGTGAGCAGAAGGAGATTAGCGCGGGAATCTTGGCGGCGACTCTGTGAGGTAAAATGCCGTGCTCAGAAGTGACAGACGCGACCTCAGTGTCCCCTATGAAGAAGAGCAGGACTGAGGAGATGAATGAAAATAGCGGTAGCATCGTGCTAAAGTTCGCTAAACTGTCTGAACACGCCACAACACCGACCAGAGGCTCTGCTAAAGCCGCCGGATACGACCTGTACAGTGCGTATGATTACACCATTGCGCCGATGGACAAGGCCATCGTGAAGACGGACATCCAGATCGCTGTTCCTGCAGGATGCTACGGCCGAGTGGCTCCTCGCTCAGGTCTGGCAGCGAAGCACTTTATCGATGTTGGAGCCGGCGTGGTGGATGAGGACTACAGAGGAAACGTTGGAGTCGTGCTGTTCAACTTCGGCAAGGAGACGTTTGAAGTGAAAAAAGGAGACCGAGTGGCTCAGCTAGTGTGTGAGCGGATCTGCTATCCTGACCTACAGGAGCTCAAGAGTCTGGATGAGACGGAGAGGGGCGCTGGGGGATTCGGCTCCACTGGGAGGAACTGAAACTGCTGctcttttacttttctttgtttaaataaaacttttttttgtaataaatctGTTACAGACGTCGTGTGGTCACCAAATGAGTTTAGTGCTGGTGTTCTGCTTTAGGCCACCAGGTGGTGCTGCTAGTAGTGTTAGCTTAAATTCA

Function

symbol description
dut Predicted to enable dUTP diphosphatase activity and magnesium ion binding activity. Predicted to be involved in dUMP biosynthetic process and dUTP catabolic process. Predicted to act upstream of or within nucleotide metabolic process. Is expressed in digestive system; nervous system; neural plate; pectoral fin; and tail bud. Orthologous to human DUT (deoxyuridine triphosphatase).

NR:

description
PREDICTED: deoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial isoform X2

GO: NA

KEGG:

id description
K01520 dut, DUT; dUTP pyrophosphatase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026911983.2 True 880 mRNA 0.50 7 1462743 1469671
XM_026911984.2 False 770 mRNA 0.51 7 1462743 1469223
XM_026911985.2 False 811 mRNA 0.51 7 1462743 1469259

Neighbor

gene id symbol gene type direction distance location
LOC113526639 LOC108264476,LOC108412674,LOC107381730 coding downstream 148088 1294052 ~ 1314655 (-)
spata5l1 spata5l1 coding downstream 228117 1227607 ~ 1234626 (-)
bnc1 bnc1,LOC106591559 coding downstream 312946 1125631 ~ 1149797 (-)
hdgfl3 LOC108264501,LOC108414447,LOC105889083,LOC101465811,LOC107726337,LOC103366351 coding downstream 346689 1103951 ~ 1116054 (-)
LOC113526880 NA coding downstream 377430 1082696 ~ 1085313 (-)
LOC113525461 slc12a1,LOC108412716,LOC107739981 coding upstream 9257 1478928 ~ 1492027 (-)
slc24a5 slc24a5,LOC108412301 coding upstream 96900 1566571 ~ 1586370 (-)
bcl2l10 NA coding upstream 394912 1864583 ~ 1876045 (-)
gnb5b gnb5,gnb5b,LOC107588534,LOC107700591,LOC107704270,LOC106562494 coding upstream 412160 1881831 ~ 1904411 (-)
myo5aa myo5a,myo5aa coding upstream 436847 1906518 ~ 1984333 (-)
G92463 NA non-coding downstream 46239 1416082 ~ 1416504 (-)
G92459 NA non-coding downstream 49096 1411693 ~ 1413647 (-)
G92413 secisbp2l non-coding downstream 107766 1351206 ~ 1354977 (-)
G92415 NA non-coding downstream 117915 1344550 ~ 1344828 (-)
G92421 NA non-coding downstream 121362 1336891 ~ 1341381 (-)
G92488 NA non-coding upstream 22623 1492294 ~ 1510364 (-)
G92496 NA non-coding upstream 66146 1535817 ~ 1632709 (-)
LOC117597535 NA non-coding upstream 69359 1539030 ~ 1541212 (-)
G92491 myef2 non-coding upstream 74861 1544532 ~ 1559181 (-)
G92489 NA non-coding upstream 95409 1565080 ~ 1566502 (-)
bloc1s6 bloc1s6 other downstream 170250 1197135 ~ 1292493 (-)
c6h15orf48 c4h15orf48,clg1h15orf48,csgr07h15orf48,clg23h15orf48,LOC107085327,LOC108251191,LOC106924773 other downstream 236392 1222721 ~ 1226351 (-)
G92340 NA other downstream 473687 982067 ~ 989056 (-)
slc27a2a LOC108264486 other downstream 615808 835116 ~ 846935 (-)
usp8 LOC107665382,LOC107595392 other downstream 660531 782910 ~ 802212 (-)
LOC113525562 slc12a1,LOC108412716,LOC108229397 other upstream 46067 1515738 ~ 1531062 (-)
sema6dl sema6d other upstream 142140 1611811 ~ 1648286 (-)
G92531 NA other upstream 298734 1768405 ~ 1768795 (-)
LOC113534649 LOC108264477 other upstream 525360 1995031 ~ 2014965 (-)
fam214a fam214a other upstream 566270 2035941 ~ 2130790 (-)

Expression


Co-expression Network