cd276 (cd276)


Basic Information

Item Value
gene id cd276
gene name cd276
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047600.1
NCBI id CM018546.1
chromosome length 31307711
location 26194050 ~ 26292607 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026914215.2
cctgctttGGATCCGTTTTATTGTGAGTGACAAAGCGAGCGAATGAACAGGGAGCGGTTGAATTTTGGCTGTTCTCTGAATAAAACCGTAATAAAGCATACATTAAGCTGAAACTCAGAAACGACCtggttttatttgtgtaaagaCTGAAACTCAGCCTGAGGTGAAAAAGGAATGAAGCAAGTAAGCTAGCTAACTCTGATGTTTATCCACCCCACACTGCCAGGCTGGACTCCGACTGCGTGCCGTGATTAAAGAAGCTTCCCTGCTgttacactcactcactcacacacacacacacacacacacacacactcctttccTGGATCACCATGCTGGCCCTCCTGTTGACTGCGCTGCTGGCTGTACACTCTATCGctcTGGAAGTGCACGTCCCTGATTTCCCAGTGGTGGTGCTTTACGGGACAGACACCATCCTCAACTGCACGTTCTTGGGGGCCAAGAACTTTAACCTTTCCGAGCTGAGCGTATTCTGGCAGCTGGCTGACACTCAGAGAAGCGTGCACGCTTACTTTGACAAGCAGGACCGGTTCATTGATCAGGACGAGCGGTTCGCTAACAGGACCAGCCTGTTTCCTGCAGAGTTAGCGTCTGGTAACGCATCGCTGCTCCTGAGGAGAGTCCGAGTGGCAGACGAGGGCAGCTACACATGCTTCGTTAAAGTGGACACCTACAGCAAGGATTCCATGTTCATGCAGGTGGCAGCCCCGTACTCCAAACCCTCAGTAACCTGGGAAACCGACGCCAACCCCAAGCCAGGTGACGTAGTAGCACTGACCTGCGTGGCATACGGCGGGTACCCCGAGGCTCAGGTGCTGTGGCAGGACGGGAGCGGGCAAAACCTGACGGAGAACGTCACCGTCTCACCTGTAGCCAACGAGCAGGGTCTTTTCACCATCAGGAGCGTCTTGACAGTGATCCTCGAACCGAACAGCACCTATAGCTGCAGACTGACCAATCCGCTTCTAGGGGACGAGGGCCACGCCTCTGTCACCATCACGGcccAGGCCCCGGTTTTTCCTCAAGTGGCTTTGTGGGTAACGATTGGGCTGGCGGTCTGTTTGCTTGGTCTCCTCATCGCCTTGGCTGCCGTCTGCCACAGGAAAATCAAAGAGAGCTGTGAAGAGATGAGAGCAGAGGAAGAAGCCAAAGAACTTGAGGAAGCCAAAGAACTTGAAGAATCCAAGACAGCTGCAACACCTCTAAAGAGCTAAAGGCAAAGAGCACAGGGTGAAACTACACATGAAGCATGGAGTCTCACATTAACCTTCAGTGCAACATGGCGTTCAACAAGAGGCACATtcgattttcacacacacacacacacacacacacacacacacacaggcacacacttTCAGTCTGTACAGGGCCGTTTTGGTGTTGCAAATATCTGTGCAACTTCTATTGCTTAAAATCAGAAAGTAGCAATTAACAATtgatatgtattttaaaatttttggaTTTTGTGCATTGACAAAGAGAGCGAATGCTGTTTGCCTTTTTCCTGGTTCTAGAGTGATGTTAAATATCAAACCCATCACTTGCTGATTTTTCTCCGCTTTCATTTCTGTTAACGGGTTAAGTTCTTGTTTTATAatctgactgtttttccaattttcttAAACAGCACGAATAGAAATAACCTCAGACATTCTAGTAGCCTAGCCTCATTTCAACAGCATCATTGGCTTCCTGTCTTCATCACAAAGactaaacagaaaagctgtttgAAGGCCACTGGCTCTGACAAGCTCCCAGCTCCACCACTGACACCAGCTCCCTCCACTCTGCATGCAGAGCCTTGCCTCATGTTCCACCTCACACCTAATGGAAAGTGAAGAGCTTAAGAGCAGAACCAGCAAGGAAGCTGCCATCAATGTATCCAGGATAgtcagtctctctttctttccctcgtCTTCTCCACCAGCGCACCAGCTCAGACTAATTAAGGCCTGCCCATGAACCAACATGTACCTGTCAGCATGTAGCTGTTTCTGCAAACTCAATGACTTGGGGGAGAAATTTGGTTGAATTCCAGTTAAGCTTGTACAAATTGCAAGTGGTTCACAGGACACACCCAGGTTTCTCTTTGTCCTTACAGTATTATGGTGAGAAATGGTTTTAATGATTACACAGTCAACTGTGATACTGTGAGGGGGAATCTGTTATGAATCTTGTAtgctgggctttttttttaaacaatggttCTTGACTTGGAACATGTTCAGTGCCAAATAGATTGATATGTTTTTCCACAAATGGATTAATTGTGCCAGTCAGTTATTATGAACatgctttaaataataaaatgatttgtcATTAAAATCTCATCTGCTACTGTGA
>XM_026914216.2
cctgctttGGATCCGTTTTATTGTGAGTGACAAAGCGAGCGAATGAACAGGGAGCGGTTGAATTTTGGCTGTTCTCTGAATAAAACCGTAATAAAGCATACATTAAGCTGAAACTCAGAAACGACCtggttttatttgtgtaaagaCTGAAACTCAGCCTGAGGTGAAAAAGGAATGAAGCAAGTAAGCTAGCTAACTCTGATGTTTATCCACCCCACACTGCCAGGCTGGACTCCGACTGCGTGCCGTGATTAAAGAAGCTTCCCTGCTgttacactcactcactcacacacacacacacacacacacacacactcctttccTGGATCACCATGCTGGCCCTCCTGTTGACTGCGCTGCTGGCTGTACACTCTATCGctcTGGAAGTGCACGTCCCTGATTTCCCAGTGGTGGTGCTTTACGGGACAGACACCATCCTCAACTGCACGTTCTTGGGGGCCAAGAACTTTAACCTTTCCGAGCTGAGCGTATTCTGGCAGCTGGCTGACACTCAGAGAAGCGTGCACGCTTACTTTGACAAGCAGGACCGGTTCATTGATCAGGACGAGCGGTTCGCTAACAGGACCAGCCTGTTTCCTGCAGAGTTAGCGTCTGGTAACGCATCGCTGCTCCTGAGGAGAGTCCGAGTGGCAGACGAGGGCAGCTACACATGCTTCGTTAAAGTGGACACCTACAGCAAGGATTCCATGTTCATGCAGGTGGCAGCCCCGTACTCCAAACCCTCAGTAACCTGGGAAACCGACGCCAACCCCAAGCCAGGTGACGTAGTAGCACTGACCTGCGTGGCATACGGCGGGTACCCCGAGGCTCAGGTGCTGTGGCAGGACGGGAGCGGGCAAAACCTGACGGAGAACGTCACCGTCTCACCTGTAGCCAACGAGCAGGGTCTTTTCACCATCAGGAGCGTCTTGACAGTGATCCTCGAACCGAACAGCACCTATAGCTGCAGACTGACCAATCCGCTTCTAGGGGACGAGGGCCACGCCTCTGTCACCATCACGGcccAGGCCCCGGTTTTTCCTCAAGTGGCTTTGTGGGTAACGATTGGGCTGGCGGTCTGTTTGCTTGGTCTCCTCATCGCCTTGGCTGCCGTCTGCCACAGGAAAATCAAAGAGAGCTGTGAAGAGATGAGAGCAGAGGAAGAAGCCAAAGAACTTGAGGAAGCCAAAGAACTTGAAGAATCCAAGACAGCTGCAACACCTCTAAAGAGCTAAAGGCAAAGAGCACAGGTTGAGAGGAGGGAGGTCGAGTGGAAGGGCAGAGcagggagggatggatggatgagaggAAGACAGGTGATCAATGACGACTAATGAACACGCCTGGAGTTTGGTTTCGCTCATCTCGCAATCTAGCTCGCTGCAAGATCCCTTGACTGCTTCCCTTAACTGAGAGGAAAACAAAATTGGAAAGCAGCTGCCGTAAGACTCAATCAAGAGCTATAGATTAGTCATAATGCTGATGAGTGAGAGGAGGGGGACCGCTGGGACTGAAATCGGGCTGGGATGGTATGAAAAATTCATGGTGTGAACTGTAAGACCCGATATCTTGCGAAATGCTTACaactttataattttttttatagaggAAGACATTATGTGGTATATAACACTACAGCAGTATTAAATGTTACGTAAATTAGGCTCTCTAGTAGGCTTCTGTTATTAGACTTCTAATAGTAGTTATTTGTTTATGCATTTCATCTCTTTAAAGTTGTAGTGTGCAAGATTTGTTCTTGTTAAAACATCAATATTGAGGCAGAACAGTAAAGTAGCTTTACACCAAGCCAATAGCCAATAGAGGCACGTTCTGATCACTGttgtttagctagctacataaaATTAGCCAGGATGtgctgtaattggaaaataatcaactttgacaTGGTCACGgtaactctgctttgcgtcGGGCCGCATCAAACCACCccgttgtttattatttaccactgtcatattttatttcttatgtagCATATTTCAAGGTAAATATTGCGATGTCTTCATCTATATTAGTACACAATGACATTTGTTGGTGTATTAACTATCACatcctttaaatattttttccatcgCTCTTTCAGCAGCCTCTCAATGTTAGCACGGCAAAATATCTGCTCATGCTGGGAATCCACTCAtgaaactacacacacagatatattcACAGTGGCACTAAAAGCACTTCCTATGAGCTTCTGGGAGAAATGGGCCATGCTTTTATTACGAGATTTTACTCTTAGTTTGTTCTCTGTGGTTTGTATATTTGTTCTCTTTTCAAATGTATTCTCTTTGCAAATGATGTAAATATGTACTACTGTTAgctcagtgtgtatatgtaaatgaCTATAAGTGTCATTTTACTAATTCATTGTTTGTGTCAGTCTCTCAGACGGCTCTGCATTTGccgttttttttccagtttagcAATGTTTGCATAATATAGTATGTATGAATGCTGAAAGCATTTCTGTGAAATCAGTTAACTGAGTTCTGTTGTGCCAAACAAACTGTAAACATGGAGTTAATCAAAGAAGTGTATGCATATGATTTATTGCATTGTGATGTGTGCAAATGCAAACATGCATGTTAGTTCTTTGCAATGGGAATATTCATAAGTTTCAGTGCACTGTCAGTGTCTTCTGTGTGACTGTTAGGGAAGATAACTTTGCCATAATGTCAAAGTATTCATACAAGTTCATGCAAGTTCCAACATCTGAATTATTAAAGCTAGTTCTAGACTGTAGTTTTCACTATGTATAAGATGATCCCAATAATGTCTTGGCCGAATTCTATAACCGGCTGTGTGATACGTGTTCTCCGTGTCAGATTAGACAATGAAGATCCTccaacgatagacctgtgattactATATGCTACATTCCACTAGCATAGCTGGTGGATTTTAGTGTTGTAGCAGCAGCCACACtctgaaattttaataaaatattattaacactCCCAGAACGTTGgtcacaatggcactaaattgGCCACTggtgagcatgtcacattatgcaTTCTCAGCTCACCAGAATTCTTTTATGGTGCATGATTCTTGtctacaacaacaaaatcagaCCAAAAATCATAGTGTAAACCCAGGTTAAGTCAGTGTCTACCAGTGGCTGATGATGACGGTTGCACCCAAAATCAGGAAATATGTAGACCACAATCCAAGATGGTGCCACACATGGCAGCTCCCTAAGAACCTAGCagtctttttttcatatttatgtcatttttctaGCCTTTTACATAAGTCTATATTTGTAGGTGCCCAGCTAGCTCAGTTAGTAGCGTGTGGGACTCTTGATCTCAGGATCATGAGTTTGAGCCCCATACTGGGTGCCAAGCCCAGTCACTGGGGGTGCACAGGCTAGtacactctcagtgctggtcccaagcccagataaatgGGGAgcgttgtgtcaggaagggcgtaaaacctgtgccaaatcaatatgtTTAAAGCgatccactgtggcaacccctaataGGAGCAGCAGAAAGAACTACTACAACAGAGTTTATATTTGTACATGACTGACACGTTATATTTAGTGCGATACATGGTTATATGGTTGCGATATGGCAATATATAGTCAAacatagtttatattttatattttatacatttatgtattATACACACTTCCATCATGCACAGTATTACCCAAATCTGTTCCTTTTAACTGACTACTTAGTAACATAAGAATTTCACTcatcttttttacttttattctgGATAAAGTGTGTAATCTGAGATGGGACAATAAAGTCTAAAGTCTATAGATTCAGGAAAAACAGTCTGAAGTGTCCATCAAAGATTTCTTTCCAAACAGTCTAATAGTAGAGAAGATATCCTAAAATCCTGACTATACAACAATTTTGATATCATCATGATTTGAAAAGCAAATCATTATGCTTTATTTGCATAATGTTTTCTTCTATAAGCTTATAGGATTCAAACTGCCTGCCTGTGAAATGTTAAAACTGGGAGTTTTTCACTcaaaaaaagtacaaatgtGATGGAGtgcaaacatttaaacattactgAATGCTCATGCTTGGTAAGTGAAATAGATTCAGATATTAGCCTTGTGTTGCCTTATATTACTTCCATGTTACATGCTTGATCTTTTgccatatattaaaatatgtgaaatactTGCATAACAATTTTATAGTTTAATGAGGCCTATTTTAGCTTGTTAAGTTCATATTTAGTGTCAATTAAGTAAAGAGATAGAGAGTAAGAGAAAAGCAA

Function

symbol description
cd276 Predicted to enable signaling receptor binding activity. Predicted to be involved in T cell receptor signaling pathway and regulation of cytokine production. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in external side of plasma membrane. Is expressed in several structures, including central nervous system; mesoderm; notochord; pronephric duct; and swim bladder bud. Orthologous to human CD276 (CD276 molecule).

NR:

description
PREDICTED: CD276 antigen isoform X1

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K06746 B7H3, CD276; immune costimulatory protein B7-H3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026914215.2 False 2367 mRNA 0.47 8 26194050 26292607
XM_026914216.2 True 4287 mRNA 0.42 8 26206949 26292607

Neighbor

gene id symbol gene type direction distance location
loxl1 loxl1,LOC108264774,LOC108430572,LOC107599768,LOC107740351,LOC107656970,LOC107722288,LOC107569907 coding downstream 288710 25890299 ~ 25905340 (-)
LOC113526366 LOC108264060,LOC108430275 coding downstream 323779 25839470 ~ 25870271 (-)
LOC113526369 LOC108264860 coding downstream 847086 25344225 ~ 25346964 (-)
LOC113526534 NA coding downstream 874357 25304736 ~ 25319693 (-)
LOC117597607 NA coding downstream 892637 25295458 ~ 25301413 (-)
zgc:158464 LOC108264397 coding upstream 31774 26324381 ~ 26464945 (-)
ube2q1 LOC105015542,LOC106562136,LOC108431153,LOC107696278,LOC107661444 coding upstream 222914 26515521 ~ 26532135 (-)
rec114 rec114 coding upstream 374660 26667267 ~ 26691735 (-)
pkma LOC108432067,LOC103044212,LOC108264538,LOC107712845,LOC107595343,LOC107665073,LOC107668482 coding upstream 534417 26827024 ~ 26847963 (-)
LOC113526953 NA coding upstream 839522 27132129 ~ 27138338 (-)
G105219 NA non-coding downstream 106355 26087480 ~ 26087695 (-)
G105092 NA non-coding downstream 358012 25833279 ~ 25836038 (-)
G104750 NA non-coding downstream 948806 25243472 ~ 25245244 (-)
G104747 NA non-coding downstream 952280 25239110 ~ 25241770 (-)
LOC117597583 NA non-coding downstream 979260 25192057 ~ 25214790 (-)
G105379 NA non-coding upstream 27425 26320032 ~ 26320770 (-)
G105608 NA non-coding upstream 451096 26743703 ~ 26743960 (-)
G105611 NA non-coding upstream 453512 26746119 ~ 26746339 (-)
G105634 LOC108263998 non-coding upstream 495333 26787940 ~ 26788856 (-)
G105639 NA non-coding upstream 526859 26819466 ~ 26819717 (-)
si:cabz01090165.1 zmp:0000001073,LOC108264041,LOC108429879,LOC107692477,LOC107722287,LOC107566287,LOC107713869 other downstream 645122 25385325 ~ 25548928 (-)
tmem91 tmem91,LOC107676753,LOC107757682,LOC107758240 other downstream 1114538 25043786 ~ 25079512 (-)
clasrp clasrp,LOC107758246,LOC107662138 other downstream 1429889 24751653 ~ 24764161 (-)
G104473 map3k10 other downstream 1482682 24623516 ~ 24711368 (-)
LOC113526510 LOC108264700,LOC108261657 other upstream 276478 26569085 ~ 26608339 (-)
si:dkey-151j17.4 NA other upstream 852281 27144888 ~ 27160099 (-)
hipk3b hipk3,LOC108264637 other upstream 3328192 29620799 ~ 29714001 (-)
G107525 NA other upstream 4050924 30343531 ~ 30344876 (-)
bbs10 bbs10 other upstream 4435437 30728044 ~ 30732059 (-)

Expression


Co-expression Network