kcnab1a (kcnab1,kcnab1a,LOC108263953,LOC107675612,LOC107566585)


Basic Information

Item Value
gene id kcnab1a
gene name kcnab1,kcnab1a,LOC108263953,LOC107675612,LOC107566585
gene type misc
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047600.1
NCBI id CM018546.1
chromosome length 31307711
location 3425718 ~ 3548751 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_034305553.1
aacacagataGACACCAGTGCCGTAGTTTCTGTAGTTCTCAGAGGAAAACTGTTTCATTCTACTCAATCCAGAGGACAGCAAACTCTTACTGGGACACTGTAGAACTCTTTAAGGGTCTCCTGGACCTTTAAGAAGAACCCTCAGAGAAGCAGACTATATGAGAGATGTACTTATACAAAGCGACTTGTGCAGAAATCCCCAACCTGAAGCCCAAAGGAATTCAGAAGTCGAGTGGAGACAGAGCACAGACCCGCATCAGCAGGGACAACTCAGTGGACAAGGCTTATCCGTTCATGTGCTGGAGTGGACTGAggactaacacacacctggagctcAAACACCTGGAGGAGTTCCTCAACACACACGCTGTCTCACTTCAGGACTCTGTACCAACCGTGACTGGCATGGTGTACAGGAACCTTGGGAAGTCTGGATTGCGAGTATCATGTCTGGGTCTCGgtACCTGGGTGACTTTTGGAGGTCAGATTTCTGATGAGgtaGCAGAGCAGCTGATGACCATAGCCTATGAGAGCGGAGTGAACCTGTTTGACACGGCCGAGGTTTACGCTGCAGGAAAAGCTGAAGTCATCCTGGGAAACATTATCAAGAAAAAGTGCTGGAGgAGATCCAGTTTAGTGATTACGACTAAGCTCTACTGGGGGGGAAAAGCCGAGACTGAGAGAGGCCTTTCCAGAAAGCATATAATAGAAGGTCTCAAAGGCTCTCTACAGAGAATGCAGCTGGAATACGTGGACGTGGTCTTCGCCAACCGTCCAGACAGCAACACACCGATGGAGGAGATCGTGAGGGCGATGACCCACGTGATCAACCAGGGGATGGCTATGTACTGGGGGACGTCCCGATGGACAGCCATGGAGATTATGGAAGCGTACTCGGTGGCGAGGCAGTTTAACCTGATCCCCCCGGTGTGTGAACAGGCCGAGTATCACCTCTTTCAAAGGGAGAAAGTGGAGGTGCAGCTGCCTGAGCTCTACCACAAGATAGgCGTAGGAGCCATGACATGGTCCCCTCTTGCCTGTGGAATCATCACTGGAAAGTATGAAAACGGCATCCCAGAATCCTCTAGGGCGTCAATGAAGTCGTACCAGTGGCTGAAGGAGAAGATCATGAGTGAGGATGGGAGGAAGCAGCAGGCTAAGCTGAAGGAGTTGGCTCACATTGCTGAGAAGCTCGGCTGCACTCTGCCACAGCTGGCTGTGGCCTGGTGCCTGAGGAACGAAGGAGTGAGTTCGGTTCTCTTAGGAACCTCCAACCCAGAACAGCTAACAGAAAACCTGGGAGCCATTCAgGTTCTCCCCAAGATGACGTCCCATGTAGTGACTGAAATCGACCACATACTTGGAAACAGGCCGTACAATAAGAAGGACTATCGCTCGTAGGGGTTTGGGTCACATCGTCCCGGTGCGTTTCCTGATCTGAACACCtctctcctgctcctcctcctcctcctcctcctcctcctcctcctcctcctcctcctccacctcctcttcCTGGGTTTGCTCTGTAGTAGGAGTCTGGGAGAGAGCCTCGCCTCGCTCGTGTCCTCTTTGTGCATGCCCCCTTCCCCTTTCTAACTCAACAGCCACGCATCACCATGACGACAACCACCGTCTGATGAAAAACTACGCACGAAATCACAAATCGTCATGTAGCAAGGGAGCGTGGTGCTCCGAGAGCCGCATTGCTGACGCCCTGCTCTGACCTCGGAAGTGTCCCGAACCTGACATGTCCTCTGCTCGGTGAGCTGTGAGCCAAGGGACATACTGGAGACCTGGAGATTGTAGAGACGGGAGGTGTGGAGCATGTCTCACCCTGCTGTTCGAGCGGGAGAACTGCAGCCTTGCTTTCGATAAGCTGAAGAGGAACAAGGCGTCCCGTTCCACGCATCCATACTGGTCTTTGCCTGTTTAACGACAGCCTGCATTAGTAATTGCATCTGATTAAAGAAAGcctgtattgttttgtttttgtaaatagtGTGACACTGATCACATTGCGCTCGTGGCAGAACACTGTATGGCTTCTGAGCTATAAAGAATTAGTGCAAGAACAAAGCTGGAACACTTAACAGTTGCTCATCAGGATGATGTTTTCAGTTTAAACTCATGAAATTGTATTGCAGATAGACAGCATTGTAGAATTAAcgttaaatatgtaaatagtgCATCCTGAACAACCAGCACACGCAGCTAGAGCTTTCGCTGCTGTGTTCctgtttgtattatttttttccagttctGTTTGCTTCTTAGGATGAAGCTCAACTGGATTCAACggctgtgtttacatgcagaCTAATAATCCGTTTTTATAATCATCTGATTGATTGGAATAAAAGAAATGGTTAATTACATTCCCTTAAGGTTTTATTTGAAATAGAAGGCAGTCTAAATGAACTGATAGATACTGTATAatctttttaatataataaaaatgagcatGTAAACcttttaatctgattattaaGAGCTTTTAGCTTCGAAATGTGTTTGCACATGTGCAGTCGAGGCATTTGACAAGCAACAAAACATCGTCCTGTGATTACACAAAGTTCATGCTAGatagtttaaattatttaaaaaataactggaCATTAAAACATGTTGaggcatatatttttttttaaatatcaataaaattaGATGATGAGTAAATGCTTGTCATATGGAAGAATGCAGTCTAGGCAAAATTTTCCACTGTTTTTAATTAGTACAGCTTCATTAATGGTGAAAATTTTGGTGAATATAAACCAAAATTCACCAAAATGTGTCCAAATTGGACATTTTAAGGAGATGGACATGATTTAAAACTTGTTTAAAGAGACAAATTAAAAAGTGTTTGGACACTCGGCTAACATGCTAACAGAGACGCTCTGATAaccctgctggaaaaaaaaaacaaaacaatagaaacccttATAGAATttctaatggttttaatggttataatgggaactgtactggttttaatggaaaaattGTCCCTGtaggtctctactggtaatttatTGCCTtttattggtggcatgttatgtctaacaccattaaggaccaataatggtaatggttttactGGATAGGTGATGGATTGTAAttgtatttgtagtggaaaccattagaatttctgtgatggtttctattgtttttttcagcagagaaGCCTCGACAAACTCAAACGCCTctctaaataaacaaaaatgttacaattgtgtgtaaatatttaaaatacttaaatggTCAATTCACAATCTGTGATCGTAATGAATTTAATTCTTCAATGTAAACACAGCCGCTGATTCCGCAGTAGTATAGAGCATGTGAAGACCAGTTTCATTCACACATTCTGTACATATGCAGCTTATAGTCAAGCTCACTACTCAATCTGAAAGCCATAATCTATATTACACATAATaaatgctgctctctctctctctctctctctctcttaattttTCCTCTTCTACATTTCCAGAGGTTATTAACTTCtcacattacatattatttttatgacaGTGTACAGCATTTACTTATTTGCAAGTCATAGTGGAAAGAACTTTTctgaaaaatgtgcatttgttttaCTCTGGTCATTACAAACTTTCTAGTgtaggtatatatatatgtgtgtgtgtgtgtgtgtgtgtgtgtgtggcggtctgggaaaacccatcagatatCATTGTCACTGACAAAAatggttttttttgctttgttgttttttttccagtaatgTACTTTGATATCTCTATTTTAAGAAAacgtaaatgtgtaaatatcaaAACGCTGTGTAAATGGTATTATTTAAGCTACTTTCTAACATTGCATTGGCTCTTTCCTGTAAATGGTATTGTTTAAGCTTTCCTGtaaagatcatgttgtgtaaggagccagtttattAAACACAGCGGTAAAAACAGTCAGCGTGCTTAAAGACGCCCAAATCCTGAAACAGACAGAAGTCTAATAAGTCTAATGTCTGTGTCTAATCtcctgcatcatcatcatcatcatcatcaaaacagagaagagcgcttacacactctgtacagaccaagttctaaaatgtttaaatgagcaaataataacacaatagCAAAAAAATTGATCCAAACGCAACAGAAGAATCTGTATTAATCAGCGATTATTACGtagcgtgaacagagatcagtggagtgaagagacggTGATGAGGctcgtgatgatgatgattattgcGTCAGGTGacgagacagagactgatgtggacgATGCTGACAGTCAAAGTGAGAACTCTGAGCTACATTGAGCTACATGCAAACGAGGAACAtctttcagttcaggaaaacgTGTTGCTCTCCAAACTGTCCAAATTTGACCACGTGTAGTGTTTTCTCAGGCTGCCACACAGAAACTTCTGAAAATCCACGCGTCCGAGTGTGTTCCATCACATGGCTACAGCTGACCTCTGGACCGAGTGCCTTTATAATAACATGCTTGTGACACACAGGGCTTTTGCGTTGTCATACGAATCCATAAACAGCCGTGTGCATACGAGGAAATGAGATACTGTGtaaatttcatcattttacAAACGACACGTTTGCTGTGGTAGTAGTCGTAGTCGCACTATCATGTCATGTGCATCACCTTACCCCTGGATGGACACACTGACTtctgtacatatatacaatatgtagAGCTCGATTATATGCTTGAAATAAAAACGCAAATGATAAA
>XM_034305554.1
TCAAGatcctctcagtgtgtgtgctgtgtgaagtGTCTCCGcagcgctcacacacacgctcagccgaacacattcacactcacacacacacacacacgcacaaagaagaggaagaggacggCTCAGGATTAAGGCAGGACTAACTTTCCGCTTGTCTGTGAGGAACTGAACTGAGCGTACGCTGTcctgcacactcacacaagACGCACAACTCCTCCAGATCTCCACAGCTTCATCGTCCTCGTCCTCGTCCTCGTCCTCGTCCTCGCTGGCCGTCATGCAGGTGTCCATCGCCTGCACCGAGCACAGTCTGAAGGGCCGGAATGGAGAACACGGCAAGCAGAGTGCCACCAGCCCCAACGTGGTGAATGCAGCTCGCGCCAAATTCCGCACAGTGGCCATCATCGCGCGCAGCTTCGGCTCCTTCACCCCGCGCCACCACATCTCTCTCAAAGAGTCCACGGGAAAGCACACGGGAATGAAGTACCGGAACCTTGGGAAGTCTGGATTGCGAGTATCATGTCTGGGTCTCGgtACCTGGGTGACTTTTGGAGGTCAGATTTCTGATGAGgtaGCAGAGCAGCTGATGACCATAGCCTATGAGAGCGGAGTGAACCTGTTTGACACGGCCGAGGTTTACGCTGCAGGAAAAGCTGAAGTCATCCTGGGAAACATTATCAAGAAAAAGTGCTGGAGgAGATCCAGTTTAGTGATTACGACTAAGCTCTACTGGGGGGGAAAAGCCGAGACTGAGAGAGGCCTTTCCAGAAAGCATATAATAGAAGGTCTCAAAGGCTCTCTACAGAGAATGCAGCTGGAATACGTGGACGTGGTCTTCGCCAACCGTCCAGACAGCAACACACCGATGGAGGAGATCGTGAGGGCGATGACCCACGTGATCAACCAGGGGATGGCTATGTACTGGGGGACGTCCCGATGGACAGCCATGGAGATTATGGAAGCGTACTCGGTGGCGAGGCAGTTTAACCTGATCCCCCCGGTGTGTGAACAGGCCGAGTATCACCTCTTTCAAAGGGAGAAAGTGGAGGTGCAGCTGCCTGAGCTCTACCACAAGATAGgCGTAGGAGCCATGACATGGTCCCCTCTTGCCTGTGGAATCATCACTGGAAAGTATGAAAACGGCATCCCAGAATCCTCTAGGGCGTCAATGAAGTCGTACCAGTGGCTGAAGGAGAAGATCATGAGTGAGGATGGGAGGAAGCAGCAGGCTAAGCTGAAGGAGTTGGCTCACATTGCTGAGAAGCTCGGCTGCACTCTGCCACAGCTGGCTGTGGCCTGGTGCCTGAGGAACGAAGGAGTGAGTTCGGTTCTCTTAGGAACCTCCAACCCAGAACAGCTAACAGAAAACCTGGGAGCCATTCAgGTTCTCCCCAAGATGACGTCCCATGTAGTGACTGAAATCGACCACATACTTGGAAACAGGCCGTACAATAAGAAGGACTATCGCTCGTAGGGGTTTGGGTCACATCGTCCCGGTGCGTTTCCTGATCTGAACACCtctctcctgctcctcctcctcctcctcctcctcctcctcctcctcctcctcctcctccacctcctcttcCTGGGTTTGCTCTGTAGTAGGAGTCTGGGAGAGAGCCTCGCCTCGCTCGTGTCCTCTTTGTGCATGCCCCCTTCCCCTTTCTAACTCAACAGCCACGCATCACCATGACGACAACCACCGTCTGATGAAAAACTACGCACGAAATCACAAATCGTCATGTAGCAAGGGAGCGTGGTGCTCCGAGAGCCGCATTGCTGACGCCCTGCTCTGACCTCGGAAGTGTCCCGAACCTGACATGTCCTCTGCTCGGTGAGCTGTGAGCCAAGGGACATACTGGAGACCTGGAGATTGTAGAGACGGGAGGTGTGGAGCATGTCTCACCCTGCTGTTCGAGCGGGAGAACTGCAGCCTTGCTTTCGATAAGCTGAAGAGGAACAAGGCGTCCCGTTCCACGCATCCATACTGGTCTTTGCCTGTTTAACGACAGCCTGCATTAGTAATTGCATCTGATTAAAGAAAGcctgtattgttttgtttttgtaaatagtGTGACACTGATCACATTGCGCTCGTGGCAGAACACTGTATGGCTTCTGAGCTATAAAGAATTAGTGCAAGAACAAAGCTGGAACACTTAACAGTTGCTCATCAGGATGATGTTTTCAGTTTAAACTCATGAAATTGTATTGCAGATAGACAGCATTGTAGAATTAAcgttaaatatgtaaatagtgCATCCTGAACAACCAGCACACGCAGCTAGAGCTTTCGCTGCTGTGTTCctgtttgtattatttttttccagttctGTTTGCTTCTTAGGATGAAGCTCAACTGGATTCAACggctgtgtttacatgcagaCTAATAATCCGTTTTTATAATCATCTGATTGATTGGAATAAAAGAAATGGTTAATTACATTCCCTTAAGGTTTTATTTGAAATAGAAGGCAGTCTAAATGAACTGATAGATACTGTATAatctttttaatataataaaaatgagcatGTAAACcttttaatctgattattaaGAGCTTTTAGCTTCGAAATGTGTTTGCACATGTGCAGTCGAGGCATTTGACAAGCAACAAAACATCGTCCTGTGATTACACAAAGTTCATGCTAGatagtttaaattatttaaaaaataactggaCATTAAAACATGTTGaggcatatatttttttttaaatatcaataaaattaGATGATGAGTAAATGCTTGTCATATGGAAGAATGCAGTCTAGGCAAAATTTTCCACTGTTTTTAATTAGTACAGCTTCATTAATGGTGAAAATTTTGGTGAATATAAACCAAAATTCACCAAAATGTGTCCAAATTGGACATTTTAAGGAGATGGACATGATTTAAAACTTGTTTAAAGAGACAAATTAAAAAGTGTTTGGACACTCGGCTAACATGCTAACAGAGACGCTCTGATAaccctgctggaaaaaaaaaacaaaacaatagaaacccttATAGAATttctaatggttttaatggttataatgggaactgtactggttttaatggaaaaattGTCCCTGtaggtctctactggtaatttatTGCCTtttattggtggcatgttatgtctaacaccattaaggaccaataatggtaatggttttactGGATAGGTGATGGATTGTAAttgtatttgtagtggaaaccattagaatttctgtgatggtttctattgtttttttcagcagagaaGCCTCGACAAACTCAAACGCCTctctaaataaacaaaaatgttacaattgtgtgtaaatatttaaaatacttaaatggTCAATTCACAATCTGTGATCGTAATGAATTTAATTCTTCAATGTAAACACAGCCGCTGATTCCGCAGTAGTATAGAGCATGTGAAGACCAGTTTCATTCACACATTCTGTACATATGCAGCTTATAGTCAAGCTCACTACTCAATCTGAAAGCCATAATCTATATTACACATAATaaatgctgctctctctctctctctctctctctcttaattttTCCTCTTCTACATTTCCAGAGGTTATTAACTTCtcacattacatattatttttatgacaGTGTACAGCATTTACTTATTTGCAAGTCATAGTGGAAAGAACTTTTctgaaaaatgtgcatttgttttaCTCTGGTCATTACAAACTTTCTAGTgtaggtatatatatatgtgtgtgtgtgtgtgtgtgtgtgtgtgtggcggtctgggaaaacccatcagatatCATTGTCACTGACAAAAatggttttttttgctttgttgttttttttccagtaatgTACTTTGATATCTCTATTTTAAGAAAacgtaaatgtgtaaatatcaaAACGCTGTGTAAATGGTATTATTTAAGCTACTTTCTAACATTGCATTGGCTCTTTCCTGTAAATGGTATTGTTTAAGCTTTCCTGtaaagatcatgttgtgtaaggagccagtttattAAACACAGCGGTAAAAACAGTCAGCGTGCTTAAAGACGCCCAAATCCTGAAACAGACAGAAGTCTAATAAGTCTAATGTCTGTGTCTAATCtcctgcatcatcatcatcatcatcatcaaaacagagaagagcgcttacacactctgtacagaccaagttctaaaatgtttaaatgagcaaataataacacaatagCAAAAAAATTGATCCAAACGCAACAGAAGAATCTGTATTAATCAGCGATTATTACGtagcgtgaacagagatcagtggagtgaagagacggTGATGAGGctcgtgatgatgatgattattgcGTCAGGTGacgagacagagactgatgtggacgATGCTGACAGTCAAAGTGAGAACTCTGAGCTACATTGAGCTACATGCAAACGAGGAACAtctttcagttcaggaaaacgTGTTGCTCTCCAAACTGTCCAAATTTGACCACGTGTAGTGTTTTCTCAGGCTGCCACACAGAAACTTCTGAAAATCCACGCGTCCGAGTGTGTTCCATCACATGGCTACAGCTGACCTCTGGACCGAGTGCCTTTATAATAACATGCTTGTGACACACAGGGCTTTTGCGTTGTCATACGAATCCATAAACAGCCGTGTGCATACGAGGAAATGAGATACTGTGtaaatttcatcattttacAAACGACACGTTTGCTGTGGTAGTAGTCGTAGTCGCACTATCATGTCATGTGCATCACCTTACCCCTGGATGGACACACTGACTtctgtacatatatacaatatgtagAGCTCGATTATATGCTTGAAATAAAAACGCAAATGATAAA
>XM_034305556.1
tgtgtgtgtatgtgtgtgtgtgtcatctggTAGCACAGAGGCTAAGGAAGGAACAGAACTGGTGTGACAGAGAGGGACTTAAAGATGGACTCATTAAGAGAATCATCAGGTCCTGATGATGAAGCGTGCAGAAGGTTGAAGATGCTCTACAGGAACCTTGGGAAGTCTGGATTGCGAGTATCATGTCTGGGTCTCGgtACCTGGGTGACTTTTGGAGGTCAGATTTCTGATGAGgtaGCAGAGCAGCTGATGACCATAGCCTATGAGAGCGGAGTGAACCTGTTTGACACGGCCGAGGTTTACGCTGCAGGAAAAGCTGAAGTCATCCTGGGAAACATTATCAAGAAAAAGTGCTGGAGgAGATCCAGTTTAGTGATTACGACTAAGCTCTACTGGGGGGGAAAAGCCGAGACTGAGAGAGGCCTTTCCAGAAAGCATATAATAGAAGGTCTCAAAGGCTCTCTACAGAGAATGCAGCTGGAATACGTGGACGTGGTCTTCGCCAACCGTCCAGACAGCAACACACCGATGGAGGAGATCGTGAGGGCGATGACCCACGTGATCAACCAGGGGATGGCTATGTACTGGGGGACGTCCCGATGGACAGCCATGGAGATTATGGAAGCGTACTCGGTGGCGAGGCAGTTTAACCTGATCCCCCCGGTGTGTGAACAGGCCGAGTATCACCTCTTTCAAAGGGAGAAAGTGGAGGTGCAGCTGCCTGAGCTCTACCACAAGATAGgCGTAGGAGCCATGACATGGTCCCCTCTTGCCTGTGGAATCATCACTGGAAAGTATGAAAACGGCATCCCAGAATCCTCTAGGGCGTCAATGAAGTCGTACCAGTGGCTGAAGGAGAAGATCATGAGTGAGGATGGGAGGAAGCAGCAGGCTAAGCTGAAGGAGTTGGCTCACATTGCTGAGAAGCTCGGCTGCACTCTGCCACAGCTGGCTGTGGCCTGGTGCCTGAGGAACGAAGGAGTGAGTTCGGTTCTCTTAGGAACCTCCAACCCAGAACAGCTAACAGAAAACCTGGGAGCCATTCAgGTTCTCCCCAAGATGACGTCCCATGTAGTGACTGAAATCGACCACATACTTGGAAACAGGCCGTACAATAAGAAGGACTATCGCTCGTAGGGGTTTGGGTCACATCGTCCCGGTGCGTTTCCTGATCTGAACACCtctctcctgctcctcctcctcctcctcctcctcctcctcctcctcctcctcctcctccacctcctcttcCTGGGTTTGCTCTGTAGTAGGAGTCTGGGAGAGAGCCTCGCCTCGCTCGTGTCCTCTTTGTGCATGCCCCCTTCCCCTTTCTAACTCAACAGCCACGCATCACCATGACGACAACCACCGTCTGATGAAAAACTACGCACGAAATCACAAATCGTCATGTAGCAAGGGAGCGTGGTGCTCCGAGAGCCGCATTGCTGACGCCCTGCTCTGACCTCGGAAGTGTCCCGAACCTGACATGTCCTCTGCTCGGTGAGCTGTGAGCCAAGGGACATACTGGAGACCTGGAGATTGTAGAGACGGGAGGTGTGGAGCATGTCTCACCCTGCTGTTCGAGCGGGAGAACTGCAGCCTTGCTTTCGATAAGCTGAAGAGGAACAAGGCGTCCCGTTCCACGCATCCATACTGGTCTTTGCCTGTTTAACGACAGCCTGCATTAGTAATTGCATCTGATTAAAGAAAGcctgtattgttttgtttttgtaaatagtGTGACACTGATCACATTGCGCTCGTGGCAGAACACTGTATGGCTTCTGAGCTATAAAGAATTAGTGCAAGAACAAAGCTGGAACACTTAACAGTTGCTCATCAGGATGATGTTTTCAGTTTAAACTCATGAAATTGTATTGCAGATAGACAGCATTGTAGAATTAAcgttaaatatgtaaatagtgCATCCTGAACAACCAGCACACGCAGCTAGAGCTTTCGCTGCTGTGTTCctgtttgtattatttttttccagttctGTTTGCTTCTTAGGATGAAGCTCAACTGGATTCAACggctgtgtttacatgcagaCTAATAATCCGTTTTTATAATCATCTGATTGATTGGAATAAAAGAAATGGTTAATTACATTCCCTTAAGGTTTTATTTGAAATAGAAGGCAGTCTAAATGAACTGATAGATACTGTATAatctttttaatataataaaaatgagcatGTAAACcttttaatctgattattaaGAGCTTTTAGCTTCGAAATGTGTTTGCACATGTGCAGTCGAGGCATTTGACAAGCAACAAAACATCGTCCTGTGATTACACAAAGTTCATGCTAGatagtttaaattatttaaaaaataactggaCATTAAAACATGTTGaggcatatatttttttttaaatatcaataaaattaGATGATGAGTAAATGCTTGTCATATGGAAGAATGCAGTCTAGGCAAAATTTTCCACTGTTTTTAATTAGTACAGCTTCATTAATGGTGAAAATTTTGGTGAATATAAACCAAAATTCACCAAAATGTGTCCAAATTGGACATTTTAAGGAGATGGACATGATTTAAAACTTGTTTAAAGAGACAAATTAAAAAGTGTTTGGACACTCGGCTAACATGCTAACAGAGACGCTCTGATAaccctgctggaaaaaaaaaacaaaacaatagaaacccttATAGAATttctaatggttttaatggttataatgggaactgtactggttttaatggaaaaattGTCCCTGtaggtctctactggtaatttatTGCCTtttattggtggcatgttatgtctaacaccattaaggaccaataatggtaatggttttactGGATAGGTGATGGATTGTAAttgtatttgtagtggaaaccattagaatttctgtgatggtttctattgtttttttcagcagagaaGCCTCGACAAACTCAAACGCCTctctaaataaacaaaaatgttacaattgtgtgtaaatatttaaaatacttaaatggTCAATTCACAATCTGTGATCGTAATGAATTTAATTCTTCAATGTAAACACAGCCGCTGATTCCGCAGTAGTATAGAGCATGTGAAGACCAGTTTCATTCACACATTCTGTACATATGCAGCTTATAGTCAAGCTCACTACTCAATCTGAAAGCCATAATCTATATTACACATAATaaatgctgctctctctctctctctctctctctcttaattttTCCTCTTCTACATTTCCAGAGGTTATTAACTTCtcacattacatattatttttatgacaGTGTACAGCATTTACTTATTTGCAAGTCATAGTGGAAAGAACTTTTctgaaaaatgtgcatttgttttaCTCTGGTCATTACAAACTTTCTAGTgtaggtatatatatatgtgtgtgtgtgtgtgtgtgtgtgtgtgtggcggtctgggaaaacccatcagatatCATTGTCACTGACAAAAatggttttttttgctttgttgttttttttccagtaatgTACTTTGATATCTCTATTTTAAGAAAacgtaaatgtgtaaatatcaaAACGCTGTGTAAATGGTATTATTTAAGCTACTTTCTAACATTGCATTGGCTCTTTCCTGTAAATGGTATTGTTTAAGCTTTCCTGtaaagatcatgttgtgtaaggagccagtttattAAACACAGCGGTAAAAACAGTCAGCGTGCTTAAAGACGCCCAAATCCTGAAACAGACAGAAGTCTAATAAGTCTAATGTCTGTGTCTAATCtcctgcatcatcatcatcatcatcatcaaaacagagaagagcgcttacacactctgtacagaccaagttctaaaatgtttaaatgagcaaataataacacaatagCAAAAAAATTGATCCAAACGCAACAGAAGAATCTGTATTAATCAGCGATTATTACGtagcgtgaacagagatcagtggagtgaagagacggTGATGAGGctcgtgatgatgatgattattgcGTCAGGTGacgagacagagactgatgtggacgATGCTGACAGTCAAAGTGAGAACTCTGAGCTACATTGAGCTACATGCAAACGAGGAACAtctttcagttcaggaaaacgTGTTGCTCTCCAAACTGTCCAAATTTGACCACGTGTAGTGTTTTCTCAGGCTGCCACACAGAAACTTCTGAAAATCCACGCGTCCGAGTGTGTTCCATCACATGGCTACAGCTGACCTCTGGACCGAGTGCCTTTATAATAACATGCTTGTGACACACAGGGCTTTTGCGTTGTCATACGAATCCATAAACAGCCGTGTGCATACGAGGAAATGAGATACTGTGtaaatttcatcattttacAAACGACACGTTTGCTGTGGTAGTAGTCGTAGTCGCACTATCATGTCATGTGCATCACCTTACCCCTGGATGGACACACTGACTtctgtacatatatacaatatgtagAGCTCGATTATATGCTTGAAATAAAAACGCAAATGATAAA
>XR_004578380.1
aacacagataGACACCAGTGCCGTAGTTTCTGTAGTTCTCAGAGGAAAACTGTTTCATTCTACTCAATCCAGAGGACAGCAAACTCTTACTGGGACACTGTAGAACTCTTTAAGGGTCTCCTGGACCTTTAAGAAGAACCCTCAGAGAAGCAGACTATATGAGAGATGTACTTATACAAAGCGACTTGTGCAGAAATCCCCAACCTGAAGCCCAAAGGAATTCAGAAGTCGAGTGGAGACAGAGCACAGACCCGCATCAGCAGGGACAACTCAGTGGACAAGGCTTATCCGTTCATGTGCTGGAGTGGACTGAggactaacacacacctggagctcAAACACCTGGAGGAGTTCCTCAACACACACGCTGTCTCACTTCAGGACTCTGTACCAACCGTGACTGGCATGGTGTACAGGAACCTTGGGAAGTCTGGATTGCGAGTATCATGTCTGGGTCTCGgtACCTGGGTGACTTTTGGAGGTCAGATTTCTGATGAGgtaGCAGAGCAGCTGATGACCATAGCCTATGAGAGCGGAGTGAACCTGTTTGACACGGCCGAGGTTTACGCTGCAGGAAAAGCTGAAGTCATCCTGGGAAACATTATCAAGAAAAAGTGCTGGAGgAGATCCAGTTTAGTGATTACGACTAAGCTCTACTGGGGGGGAAAAGCCGAGACTGAGAGAGGCCTTTCCAGAAAGCATATAATAGAAGGTCTCAAAGGCTCTCTACAGAGAATGCAGCTGGAATACGTGGACGTGGTCTTCGCCAACCGTCCAGACAGCAACACACCGATGGAGGAGATCGTGAGGGCGATGACCCACGTGATCAACCAGGGGATGGCTATGTACTGGGGGACGTCCCGATGGACAGCCATGGAGATTATGGAAGCGTACTCGGTGGCGAGGCAGTTTAACCTGATCCCCCCGGTGTGTGAACAGGCCGAGTATCACCTCTTTCAAAGGGAGAAAGTGGAGGTGCAGCTGCCTGAGCTCTACCACAAGATAGgCGTAGGAGCCATGACATGGTCCCCTCTTGCCTGTGGAATCATCACTGGAAAGTATGAAAACGGCATCCCAGAATCCTCTAGGGCGTCAATGAAGTCGTACCAGTGGCTGAAGGAGAAGATCATGAGTGAGGATGGGAGGAAGCAGCAGGCTAAGCTGAAGGAGTTGGCTCACATTGCTGAGAAGCTCGGCTGCACTCTGCCACAGCTGGCTCCTGGTGCCTGAGGAACGAAGGAGTGAGTTCGGTTCTCTTAGGAACCTCCAACCCAGAACAGCTAACAGAAAACCTGGGAGCCATTCAgGTTCTCCCCAAGATGACGTCCCATGTAGTGACTGAAATCGACCACATACTTGGAAACAGGCCGTACAATAAGAAGGACTATCGCTCGTAGGGGTTTGGGTCACATCGTCCCGGTGCGTT

Function

symbol description
kcnab1a Predicted to enable aldo-keto reductase (NADP) activity; potassium channel regulator activity; and transmembrane transporter binding activity. Predicted to be involved in negative regulation of delayed rectifier potassium channel activity. Predicted to act upstream of or within potassium ion transport; regulation of ion transmembrane transport; and transmembrane transport. Predicted to be located in cytoplasm and plasma membrane. Predicted to be integral component of membrane. Predicted to be part of voltage-gated potassium channel complex. Predicted to be active in juxtaparanode region of axon. Predicted to be extrinsic component of cytoplasmic side of plasma membrane. Is expressed in immature eye; myotome; nervous system; pharyngeal arch; and somite. Human ortholog(s) of this gene implicated in temporal lobe epilepsy. Orthologous to human KCNAB1 (potassium voltage-gated channel subfamily A regulatory beta subunit 1).
kcnab1 Enables NADPH binding activity; potassium channel regulator activity; and protein domain specific binding activity. Involved in negative regulation of voltage-gated potassium channel activity. Located in cytosol. Is extrinsic component of cytoplasmic side of plasma membrane. Part of voltage-gated potassium channel complex. Implicated in temporal lobe epilepsy.

NR:

description
PREDICTED: voltage-gated potassium channel subunit beta-1-like isoform X1

GO:

id name namespace
GO:0071805 potassium ion transmembrane transport biological_process
GO:0034765 regulation of ion transmembrane transport biological_process
GO:0016021 integral component of membrane cellular_component
GO:0005737 cytoplasm cellular_component
GO:0005249 voltage-gated potassium channel activity molecular_function

KEGG:

id description
K04882 KCNAB1; potassium voltage-gated channel Shaker-related subfamily A, beta member 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_034305553.1 False 4740 mRNA 0.43 14 3425718 3531691
XM_034305554.1 True 4813 mRNA 0.44 14 3425718 3510571
XM_034305556.1 False 4476 mRNA 0.42 15 3425718 3548751
XR_004578380.1 False 1426 misc_RNA 0.51 14 3429028 3531691

Neighbor

gene id symbol gene type direction distance location
tiparp tiparp,LOC107711769,LOC107566587,LOC107745418,LOC107570705 coding downstream 27190 3367401 ~ 3398528 (-)
lekr1 LOC108264582,LOC108264140 coding downstream 134482 3243210 ~ 3291236 (-)
ptx3a ptx3 coding downstream 296329 3123317 ~ 3129389 (-)
LOC113534302 LOC108264856,LOC108432364 coding downstream 357417 3064670 ~ 3068301 (-)
LOC113534536 LOC108264856,LOC108432364 coding downstream 364223 3056704 ~ 3061495 (-)
LOC113534786 LOC108264139,LOC108437982 coding upstream 1330 3550081 ~ 3559163 (-)
gmps gmps coding upstream 13575 3562326 ~ 3584100 (-)
LOC113534660 LOC108263992,LOC108263974,LOC108437989,LOC108434102,LOC108437987 coding upstream 217178 3765929 ~ 3771200 (-)
LOC113534571 LOC108264136,LOC108264184,LOC108264127,LOC108264128,LOC108264116,LOC108264183,LOC108264134 coding upstream 231629 3780380 ~ 3783481 (-)
LOC113534753 LOC108264184,LOC108264136,LOC108264128,LOC108264116,LOC108264127,LOC108264183,LOC108264134 coding upstream 238493 3787244 ~ 3792996 (-)
LOC117597513 NA non-coding downstream 3560 3406145 ~ 3422158 (-)
G93380 NA non-coding downstream 58523 3366721 ~ 3367195 (-)
G93339 NA non-coding downstream 190066 3227269 ~ 3235652 (-)
G93353 NA non-coding downstream 210253 3215259 ~ 3215465 (-)
G93350 NA non-coding downstream 213595 3211868 ~ 3212123 (-)
G93557 NA non-coding upstream 30266 3579017 ~ 3581206 (-)
G93639 NA non-coding upstream 186346 3735097 ~ 3735392 (-)
LOC113534402 NA non-coding upstream 396236 3944987 ~ 3946376 (-)
G93707 NA non-coding upstream 606506 4155257 ~ 4155497 (-)
G93710 NA non-coding upstream 623322 4172073 ~ 4172312 (-)
G93047 NA other downstream 657420 2759612 ~ 2768298 (-)
G93046 NA other downstream 674549 2749388 ~ 2751169 (-)
fam214a fam214a other downstream 1294928 2035941 ~ 2130790 (-)
onecut1 onecut1 other downstream 1315783 2091734 ~ 2109935 (-)
LOC113534649 LOC108264477 other downstream 1410753 1995031 ~ 2014965 (-)
LOC117597611 LOC108264121,LOC108264120,LOC108264117 other upstream 522049 4070800 ~ 4073533 (-)
G93711 LOC101487076 other upstream 624537 4173288 ~ 4173594 (-)
LOC113534736 LOC108264124,LOC108434067,LOC108434089,LOC108434035,LOC108434036,LOC103037408,LOC108434043,LOC108264108,LOC108264111,LOC108264104,LOC108434059 other upstream 668267 4217018 ~ 4220607 (-)
ss18l2 ss18l2,s18l2 other upstream 2090945 5639696 ~ 5642949 (-)
LOC113534829 kctd15,LOC107668486,LOC107712586,LOC107658979,LOC107099506 other upstream 2165092 5713843 ~ 5786431 (-)

Expression


Co-expression Network