Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC113526678 |
| gene name | NA |
| gene type | non-coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047600.1 |
| NCBI id | CM018546.1 |
| chromosome length | 31307711 |
| location | 30714118 ~ 30715453 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_003402799.2 | True | 325 | lncRNA | 0.47 | 3 | 30714118 | 30715453 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| caps2 | caps2 | coding | downstream | 3395 | 30700440 ~ 30710723 (-) |
| cd9a | cd9 | coding | downstream | 88785 | 30614083 ~ 30625333 (-) |
| si:dkey-88e18.8 | LOC108264158 | coding | downstream | 104911 | 30604089 ~ 30609207 (-) |
| cfap161 | cfap161 | coding | downstream | 116374 | 30592721 ~ 30597744 (-) |
| utp15 | utp15,LOC107559694,LOC107600050,LOC107735583 | coding | downstream | 139443 | 30565402 ~ 30574675 (-) |
| si:dkey-30c15.10 | LOC108264154 | coding | upstream | 25014 | 30740467 ~ 30755090 (-) |
| pdp2 | pdp2,LOC108423909 | coding | upstream | 40996 | 30756449 ~ 30760179 (-) |
| si:dkey-30c15.2 | LOC108264169 | coding | upstream | 77487 | 30792940 ~ 30804496 (-) |
| LOC113524884 | LOC108264165 | coding | upstream | 134951 | 30850404 ~ 30857147 (-) |
| ppp1r37 | ppp1r37 | coding | upstream | 142476 | 30857929 ~ 30898090 (-) |
| G107550 | NA | non-coding | downstream | 244215 | 30443523 ~ 30469903 (-) |
| G107574 | NA | non-coding | downstream | 290780 | 30421252 ~ 30423338 (-) |
| G107536 | NA | non-coding | downstream | 307154 | 30368887 ~ 30406964 (-) |
| G107532 | NA | non-coding | downstream | 322660 | 30363627 ~ 30391458 (-) |
| G107533 | NA | non-coding | downstream | 344930 | 30368338 ~ 30369188 (-) |
| G107800 | NA | non-coding | upstream | 95594 | 30811047 ~ 30826087 (-) |
| G107804 | NA | non-coding | upstream | 105256 | 30820709 ~ 30822357 (-) |
| G107805 | NA | non-coding | upstream | 112698 | 30828151 ~ 30829653 (-) |
| G107806 | NA | non-coding | upstream | 120181 | 30835634 ~ 30884613 (-) |
| LOC117597590 | NA | non-coding | upstream | 185112 | 30900565 ~ 30908021 (-) |
| G107525 | NA | other | downstream | 369242 | 30343531 ~ 30344876 (-) |
| hipk3b | hipk3,LOC108264637 | other | downstream | 1000117 | 29620799 ~ 29714001 (-) |
| si:dkey-151j17.4 | NA | other | downstream | 3554019 | 27144888 ~ 27160099 (-) |
| LOC113526510 | LOC108264700,LOC108261657 | other | downstream | 4105779 | 26569085 ~ 26608339 (-) |
| G105376 | NA | other | downstream | 4473113 | 26239330 ~ 26241005 (-) |
| bbs10 | bbs10 | other | upstream | 12591 | 30728044 ~ 30732059 (-) |
| selenot1b | LOC108264179,LOC108429894 | other | upstream | 70140 | 30785593 ~ 30849697 (-) |
| G107803 | NA | other | upstream | 101126 | 30816579 ~ 30820422 (-) |
| LOC113524890 | LOC108264167 | other | upstream | 203731 | 30919184 ~ 30989204 (-) |
