znf366 (znf366,LOC108430334,LOC107573350)


Basic Information

Item Value
gene id znf366
gene name znf366,LOC108430334,LOC107573350
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047602.1
NCBI id CM018548.1
chromosome length 30442583
location 16024372 ~ 16029359 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026928384.2
tccgAAGGTACTCATCTGAAAAATGGGAACAAAGTGATTGTTCCTGTTCTCTTTCTTAAGTCACTTCAAATGCTGTCTGCTGTGTTGGAGGCTCATTGTCCAGAGCACGGGGCAAGCGACAGGCACGTGATGGACAAATCCATAATTTATGGTAAAAGAAAGAACCCAACTGACACTAATCTGAGGACTTGTCCAGACCCATAACCATAACATCTTTCTATCTGAGAGGTTTTTTTATTGGCAGACCAGCTGCTCAACCCTCTCAATATGGACCTCAATGATTATGAGCCCAAAAGGGCAGATGATTCCATTACCAGAACTGTTGACCTCTCCCATCTACCCTACCCTATTGCTCAACCTGtccctaccaaacctctaccaCACAAATATATCCCAGAGATGATTGATCTCAACAAGCTTCAGTTTCATAGAGTCCTGGGCAGATACGATACAGTGCAGGTCAAACAAGAAACAGTGAAACCCATGCCAATATGGCCTTCATCCCCTCTTCTCCTGCACCCTCCTTCTCCATACTTCCCACCCCTCCGCCCAAGCTTGGTCCCTTTCCCGTTCCTGATGCCAGGCCCAGTCATGCACCTTTCTCCCAATTCCTTCTACCAACGTGAGGTGCCAAGATACTACAGAAGAACCGCGGATGGCTCCAGAGCTGGGCTGAGCAGTGCTGAGAAGTTTGGCCTGAACATCCACATAGATGACAGCTACTATGTGGATGTAGGAGGTGAACAGAAACGCTGGAAGTGCCGAATGTGTGAGAAGTCCTACACTTCTAAGTACAATCTTGTTACGCACATCCTGGGCCACAGTGGCATCAAGCCACATGGCTGTGGCCTCTGTGGGAAGCTTTTCAAGCAGCTGagccacctgcacacacacatgctcacccACCAAGGTGCCCGTCCCCATAAGTGCCAGGTGTGCCACAAGGCATTCACTCAGACAAGTCACCTGAAGAGACATATGATGCAACACAGTGATATCAAACCATAcagttgcagtgtgtgtgctcgAGGCTTCGCCTATCCCAGTGAGCTTAAGGCTCACGAGCTTAAGCATGAGAGGGGccaagaaaatgtgtgtgttgagtgtggcCTCGACTTTCCAACACTTGCGCAGCTGAAACGACATCTGACAGTCCACCGTGGACCAGCACAGTACAACTGCAGCGAGTGTGGCAAGAGCTTCCAGTACCCAAGTCAGCTGCAAAACCACATGATGAAGCACAAGGACATACGGCCATTCATCTGTAGTGAGTGTGGTATGGAGTTTGTGCAGTCCCATCACCTCAAGCAGCACACCCTTACCCACAAGGGAGTGAAGGAGCATAAGTGCCGCATCTGTGGCCGTGAGTTTACCCTGCTGGCTAACATGAAGCGCCACATTTTAATCCACACCAACATCCGAGCCTACCAGTGCCACCTGTGCTACAAGAGCTTTGTCCAGAAGCAGACACTCAAGGCCCACATGATTGTCCACTCAGACATCAAGCCTTACAAATGCAAGCTATGTGGGAAGGAGTTCAACAGAATGCATAATCTGATGGGACACATGCACTTGCACTCAGACAGCAAACCTTTCAAGTGCCTGTACTGCCCCAGCAAGTTCACTCTGAAAGGGAATCTGACCCGGCACATGAAGGTCAAACACGGCATCATGGACCGAGGACTAGATGCACGAGTATTCAGGCGCAGAGGACGGTTATGTCTTTCCAGCCCTCTCCGTCTCCTGTCTCACTTCAGTCAGGACAAGCCTTTCGATCTGTCCCAGAAGAGCCATCCCCAACTCCGTCTTTCTCAGTCAGATGGTGAGAGCCGTGAGGAAGATGAGGACAGCTTGTACAGGATGAGCCAGTACAGCCCTGACCGTTACCAGACAGAACTGGGAGGAGCCAGAGAGGCAGAcgatgaagatgaggaggaagaggatgggATGATccatgaagaagaagaggagaggagtggAAAGCAGTTCAACTTGAGCAAAGAGGAGCTCCAGTGCATACGTTACAGGGAGAGTCAGCAAGGCTCAGTCTCTGATGGAGAGCTCTACTGTAGTCGAACATATCGGGATAGAAAATTAAGCTGTGAATGAAGTCTTATAAAGATATCCTTAAAATGtcttttggaaaagaaaaaaagtgaaataaatctgtgaaacaGTCTTCATTTCCAGTAGTGTTGTAGCATGAATGAATTTGCTAATAACAGCATattatttaaagtaattaatataattgtttcCCCAAATGTTACTTAATACATAATCTCTAACAGTGTGCATGCTTTAACCTATTGTATAGTTTGTAAGAAGGAGATTTACAATTAATAAAGAACATGATTTCAGAAATGACTGATAAATCAATGTTTTATGTACTGATATTTTCATAACATTTGATAACGTTTTTTGAGaaataacatgtaaataattCTAAAAGGAAGTTGctgtgattgtgtttttttctgtgatgtgtGA
>XM_026928393.2
GGCAAGCGACAGGTAAGCGCATGGCTCgctaacacactcacacgcagACAGAGGCTAGTGTAGTGTTTAATCGGGGAACATTGAGCGAGGAGGAGCTTGAGTTTATTACCTGAATCCATCAGGGACAGCAAGCTGGGCAGAGTCCTTGTGGTCACTGAAGCACGTGATGGACAAATCCATAATTTATGGTAAAAGAAAGAACCCAACTGACACTAATCTGAGGACTTGTCCAGACCCATAACCATAACATCTTTCTATCTGAGAGGTTTTTTTATTGGCAGACCAGCTGCTCAACCCTCTCAATATGGACCTCAATGATTATGAGCCCAAAAGGGCAGATGATTCCATTACCAGAACTGTTGACCTCTCCCATCTACCCTACCCTATTGCTCAACCTGtccctaccaaacctctaccaCACAAATATATCCCAGAGATGATTGATCTCAACAAGCTTCAGTTTCATAGAGTCCTGGGCAGATACGATACAGTGCAGGTCAAACAAGAAACAGTGAAACCCATGCCAATATGGCCTTCATCCCCTCTTCTCCTGCACCCTCCTTCTCCATACTTCCCACCCCTCCGCCCAAGCTTGGTCCCTTTCCCGTTCCTGATGCCAGGCCCAGTCATGCACCTTTCTCCCAATTCCTTCTACCAACGTGAGGTGCCAAGATACTACAGAAGAACCGCGGATGGCTCCAGAGCTGGGCTGAGCAGTGCTGAGAAGTTTGGCCTGAACATCCACATAGATGACAGCTACTATGTGGATGTAGGAGGTGAACAGAAACGCTGGAAGTGCCGAATGTGTGAGAAGTCCTACACTTCTAAGTACAATCTTGTTACGCACATCCTGGGCCACAGTGGCATCAAGCCACATGGCTGTGGCCTCTGTGGGAAGCTTTTCAAGCAGCTGagccacctgcacacacacatgctcacccACCAAGGTGCCCGTCCCCATAAGTGCCAGGTGTGCCACAAGGCATTCACTCAGACAAGTCACCTGAAGAGACATATGATGCAACACAGTGATATCAAACCATAcagttgcagtgtgtgtgctcgAGGCTTCGCCTATCCCAGTGAGCTTAAGGCTCACGAGCTTAAGCATGAGAGGGGccaagaaaatgtgtgtgttgagtgtggcCTCGACTTTCCAACACTTGCGCAGCTGAAACGACATCTGACAGTCCACCGTGGACCAGCACAGTACAACTGCAGCGAGTGTGGCAAGAGCTTCCAGTACCCAAGTCAGCTGCAAAACCACATGATGAAGCACAAGGACATACGGCCATTCATCTGTAGTGAGTGTGGTATGGAGTTTGTGCAGTCCCATCACCTCAAGCAGCACACCCTTACCCACAAGGGAGTGAAGGAGCATAAGTGCCGCATCTGTGGCCGTGAGTTTACCCTGCTGGCTAACATGAAGCGCCACATTTTAATCCACACCAACATCCGAGCCTACCAGTGCCACCTGTGCTACAAGAGCTTTGTCCAGAAGCAGACACTCAAGGCCCACATGATTGTCCACTCAGACATCAAGCCTTACAAATGCAAGCTATGTGGGAAGGAGTTCAACAGAATGCATAATCTGATGGGACACATGCACTTGCACTCAGACAGCAAACCTTTCAAGTGCCTGTACTGCCCCAGCAAGTTCACTCTGAAAGGGAATCTGACCCGGCACATGAAGGTCAAACACGGCATCATGGACCGAGGACTAGATGCACGAGTATTCAGGCGCAGAGGACGGTTATGTCTTTCCAGCCCTCTCCGTCTCCTGTCTCACTTCAGTCAGGACAAGCCTTTCGATCTGTCCCAGAAGAGCCATCCCCAACTCCGTCTTTCTCAGTCAGATGGTGAGAGCCGTGAGGAAGATGAGGACAGCTTGTACAGGATGAGCCAGTACAGCCCTGACCGTTACCAGACAGAACTGGGAGGAGCCAGAGAGGCAGAcgatgaagatgaggaggaagaggatgggATGATccatgaagaagaagaggagaggagtggAAAGCAGTTCAACTTGAGCAAAGAGGAGCTCCAGTGCATACGTTACAGGGAGAGTCAGCAAGGCTCAGTCTCTGATGGAGAGCTCTACTGTAGTCGAACATATCGGGATAGAAAATTAAGCTGTGAATGAAGTCTTATAAAGATATCCTTAAAATGtcttttggaaaagaaaaaaagtgaaataaatctgtgaaacaGTCTTCATTTCCAGTAGTGTTGTAGCATGAATGAATTTGCTAATAACAGCATattatttaaagtaattaatataattgtttcCCCAAATGTTACTTAATACATAATCTCTAACAGTGTGCATGCTTTAACCTATTGTATAGTTTGTAAGAAGGAGATTTACAATTAATAAAGAACATGATTTCAGAAATGACTGATAAATCAATGTTTTATGTACTGATATTTTCATAACATTTGATAACGTTTTTTGAGaaataacatgtaaataattCTAAAAGGAAGTTGctgtgattgtgtttttttctgtgatgtgtGA
>XM_026928403.2
ATTCTTTTCAGAGTAATAACAATGTCACAAACCCAAAATACCAACACGAAGAAGAACTGCTGAAGTTCCGGCACGTGATGGACAAATCCATAATTTATGGTAAAAGAAAGAACCCAACTGACACTAATCTGAGGACTTGTCCAGACCCATAACCATAACATCTTTCTATCTGAGAGGTTTTTTTATTGGCAGACCAGCTGCTCAACCCTCTCAATATGGACCTCAATGATTATGAGCCCAAAAGGGCAGATGATTCCATTACCAGAACTGTTGACCTCTCCCATCTACCCTACCCTATTGCTCAACCTGtccctaccaaacctctaccaCACAAATATATCCCAGAGATGATTGATCTCAACAAGCTTCAGTTTCATAGAGTCCTGGGCAGATACGATACAGTGCAGGTCAAACAAGAAACAGTGAAACCCATGCCAATATGGCCTTCATCCCCTCTTCTCCTGCACCCTCCTTCTCCATACTTCCCACCCCTCCGCCCAAGCTTGGTCCCTTTCCCGTTCCTGATGCCAGGCCCAGTCATGCACCTTTCTCCCAATTCCTTCTACCAACGTGAGGTGCCAAGATACTACAGAAGAACCGCGGATGGCTCCAGAGCTGGGCTGAGCAGTGCTGAGAAGTTTGGCCTGAACATCCACATAGATGACAGCTACTATGTGGATGTAGGAGGTGAACAGAAACGCTGGAAGTGCCGAATGTGTGAGAAGTCCTACACTTCTAAGTACAATCTTGTTACGCACATCCTGGGCCACAGTGGCATCAAGCCACATGGCTGTGGCCTCTGTGGGAAGCTTTTCAAGCAGCTGagccacctgcacacacacatgctcacccACCAAGGTGCCCGTCCCCATAAGTGCCAGGTGTGCCACAAGGCATTCACTCAGACAAGTCACCTGAAGAGACATATGATGCAACACAGTGATATCAAACCATAcagttgcagtgtgtgtgctcgAGGCTTCGCCTATCCCAGTGAGCTTAAGGCTCACGAGCTTAAGCATGAGAGGGGccaagaaaatgtgtgtgttgagtgtggcCTCGACTTTCCAACACTTGCGCAGCTGAAACGACATCTGACAGTCCACCGTGGACCAGCACAGTACAACTGCAGCGAGTGTGGCAAGAGCTTCCAGTACCCAAGTCAGCTGCAAAACCACATGATGAAGCACAAGGACATACGGCCATTCATCTGTAGTGAGTGTGGTATGGAGTTTGTGCAGTCCCATCACCTCAAGCAGCACACCCTTACCCACAAGGGAGTGAAGGAGCATAAGTGCCGCATCTGTGGCCGTGAGTTTACCCTGCTGGCTAACATGAAGCGCCACATTTTAATCCACACCAACATCCGAGCCTACCAGTGCCACCTGTGCTACAAGAGCTTTGTCCAGAAGCAGACACTCAAGGCCCACATGATTGTCCACTCAGACATCAAGCCTTACAAATGCAAGCTATGTGGGAAGGAGTTCAACAGAATGCATAATCTGATGGGACACATGCACTTGCACTCAGACAGCAAACCTTTCAAGTGCCTGTACTGCCCCAGCAAGTTCACTCTGAAAGGGAATCTGACCCGGCACATGAAGGTCAAACACGGCATCATGGACCGAGGACTAGATGCACGAGTATTCAGGCGCAGAGGACGGTTATGTCTTTCCAGCCCTCTCCGTCTCCTGTCTCACTTCAGTCAGGACAAGCCTTTCGATCTGTCCCAGAAGAGCCATCCCCAACTCCGTCTTTCTCAGTCAGATGGTGAGAGCCGTGAGGAAGATGAGGACAGCTTGTACAGGATGAGCCAGTACAGCCCTGACCGTTACCAGACAGAACTGGGAGGAGCCAGAGAGGCAGAcgatgaagatgaggaggaagaggatgggATGATccatgaagaagaagaggagaggagtggAAAGCAGTTCAACTTGAGCAAAGAGGAGCTCCAGTGCATACGTTACAGGGAGAGTCAGCAAGGCTCAGTCTCTGATGGAGAGCTCTACTGTAGTCGAACATATCGGGATAGAAAATTAAGCTGTGAATGAAGTCTTATAAAGATATCCTTAAAATGtcttttggaaaagaaaaaaagtgaaataaatctgtgaaacaGTCTTCATTTCCAGTAGTGTTGTAGCATGAATGAATTTGCTAATAACAGCATattatttaaagtaattaatataattgtttcCCCAAATGTTACTTAATACATAATCTCTAACAGTGTGCATGCTTTAACCTATTGTATAGTTTGTAAGAAGGAGATTTACAATTAATAAAGAACATGATTTCAGAAATGACTGATAAATCAATGTTTTATGTACTGATATTTTCATAACATTTGATAACGTTTTTTGAGaaataacatgtaaataattCTAAAAGGAAGTTGctgtgattgtgtttttttctgtgatgtgtGA

Function

symbol description
znf366 Predicted to enable DNA-binding transcription factor activity; RNA polymerase II cis-regulatory region sequence-specific DNA binding activity; and transcription corepressor activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Orthologous to human ZNF366 (zinc finger protein 366).

NR:

description
PREDICTED: zinc finger protein 366

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026928384.2 False 2490 mRNA 0.46 5 16024372 16029359
XM_026928393.2 True 2527 mRNA 0.47 5 16024482 16029359
XM_026928403.2 False 2438 mRNA 0.46 5 16025071 16029359

Neighbor

gene id symbol gene type direction distance location
LOC117597822 LOC108265070,LOC108430330,LOC107661523,LOC107712675,LOC107569675 coding upstream 13473 16005482 ~ 16010899 (+)
smyd1b LOC108265070,LOC108430330,LOC107712675,LOC107569675,LOC107661523 coding upstream 21061 15996325 ~ 16003311 (+)
znf367 znf367,LOC107704585,LOC107726881,LOC107568105 coding upstream 96726 15923290 ~ 15927646 (+)
cdc14b cdc14b,LOC108265480 coding upstream 104360 15907529 ~ 15920012 (+)
prxl2c NA coding upstream 118874 15899578 ~ 15905498 (+)
mrps27 mrps27 coding downstream 5143 16034502 ~ 16042147 (+)
ptger4a LOC108265018 coding downstream 25561 16054920 ~ 16059663 (+)
loxhd1a loxhd1b,LOC108265797,LOC108430301 coding downstream 43415 16072774 ~ 16085108 (+)
bnip3la bnip3la,LOC108265827,LOC108430339,LOC107671016,LOC107552154,LOC107699644,LOC107560275 coding downstream 81013 16110372 ~ 16124577 (+)
dpysl2a dpysl2a,dpysl2b,LOC108266046,LOC108430340,LOC107713031,LOC108277094,LOC107671020,LOC108427246,LOC107678023 coding downstream 98827 16128186 ~ 16158486 (+)
G133617 NA non-coding upstream 52263 15971860 ~ 15972109 (+)
LOC117597798 NA non-coding upstream 383414 15630453 ~ 15640958 (+)
G133386 NA non-coding upstream 418033 15597408 ~ 15606339 (+)
G133342 NA non-coding upstream 598000 15425189 ~ 15426372 (+)
G133330 NA non-coding upstream 622610 15401446 ~ 15401762 (+)
G133635 NA non-coding downstream 13481 16042840 ~ 16043039 (+)
G133721 NA non-coding downstream 135327 16164686 ~ 16170597 (+)
G133722 NA non-coding downstream 141826 16171185 ~ 16171500 (+)
G133724 NA non-coding downstream 142931 16172290 ~ 16172533 (+)
G133842 NA non-coding downstream 301221 16330580 ~ 16362249 (+)
G133631 smyd1b,fabp1,LOC108265070,LOC108430330,LOC103043953,LOC108430333,LOC107704576,LOC107579792,LOC107573351,LOC107712467,LOC107726869 other upstream 5554 16002061 ~ 16018818 (+)
srp19 srp19 other upstream 639548 15378942 ~ 15384824 (+)
commd10 commd10 other upstream 1041488 14940301 ~ 14982884 (+)
trnae-cuc_19 NA other upstream 1044468 14979833 ~ 14979904 (+)
G132595 atoh1 other upstream 1700922 14322172 ~ 14323450 (+)
si:ch211-166a6.5 LOC108265755,LOC107714554 other downstream 373389 16402748 ~ 16419509 (+)
mtmr3 mtmr3,LOC107699659 other downstream 550898 16580257 ~ 16621766 (+)
bicdl1 bicdl1,LOC107724381,LOC107699624 other downstream 686774 16716133 ~ 16737984 (+)
gucd1 gucd1,LOC102792582 other downstream 830617 16859976 ~ 16868768 (+)
G134341 NA other downstream 1266752 17296111 ~ 17296883 (+)

Expression


Co-expression Network