G174632


Basic Information

Item Value
gene id G174632
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047605.1
NCBI id CM018551.1
chromosome length 26640196
location 2074137 ~ 2074357 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU206700
ccacaatgccgttcgacGACCTGCTGACAGCGGTGCAGTGGGATTCgtccctcgcttcatctctaccttaagagagcgatgcagcggcgctttagtgttttagtctgtccagctctctcatctcctcaaCTCtgcactctgctcaaacagatcagctttcaAAACTTCAACTTTCACGCTAATAACGCCGTCAACAACATCGCCTTCGTATTCATCATGTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU206700 True 221 lncRNA 0.50 1 2074137 2074357

Neighbor

gene id symbol gene type direction distance location
LOC113536684 znf821 coding downstream 1864 2054212 ~ 2072273 (-)
LOC113536364 LOC108271342 coding downstream 63515 1996794 ~ 2010622 (-)
tp53i11a tp53i11,tp53i11a,LOC107687052,LOC108435353,LOC107671372 coding downstream 94458 1936826 ~ 1979679 (-)
tspan18a tspan18,tspan18a,LOC107585935,LOC107671373,LOC107593454,LOC107750555 coding downstream 199606 1832326 ~ 1874531 (-)
ext2 ext2,LOC107593432 coding downstream 242986 1777341 ~ 1831151 (-)
marveld3 marveld3 coding upstream 104191 2178548 ~ 2182385 (-)
hnf4b LOC108271394,LOC108429112 coding upstream 227264 2301621 ~ 2316135 (-)
dhx38 dhx38,LOC106562086,LOC106587179 coding upstream 902102 2976459 ~ 2997108 (-)
LOC113536623 LOC108270986,LOC105889116,LOC107659108 coding upstream 929578 3003935 ~ 3008616 (-)
zgc:162592 LOC108270985 coding upstream 946197 3020554 ~ 3023480 (-)
G174600 NA non-coding downstream 20426 2051609 ~ 2053711 (-)
G174606 NA non-coding downstream 23685 2045441 ~ 2050452 (-)
G174617 NA non-coding downstream 78501 1994101 ~ 1995636 (-)
G174622 NA non-coding downstream 82436 1991244 ~ 1991701 (-)
G174390 NA non-coding downstream 356892 1716837 ~ 1717245 (-)
G174665 NA non-coding upstream 89279 2163636 ~ 2163863 (-)
G174674 NA non-coding upstream 99810 2174167 ~ 2207305 (-)
G174680 NA non-coding upstream 148256 2222613 ~ 2265747 (-)
G174708 NA non-coding upstream 202689 2277046 ~ 2277367 (-)
G174929 NA non-coding upstream 337315 2411672 ~ 2411967 (-)
LOC113536731 hsbp1b,hsbp1a,LOC108271362,LOC103023435,LOC108429110,LOC107553992,LOC107583924,LOC107561694 other downstream 51906 2014722 ~ 2022231 (-)
cd82a cd82 other downstream 140915 1856883 ~ 1933222 (-)
G174247 fbxo22 other downstream 1014903 1057656 ~ 1059234 (-)
fbxl8 fbxl8 other downstream 1071105 999059 ~ 1003032 (-)
G174207 LOC108270943,LOC108444425 other downstream 1111059 961496 ~ 963078 (-)
G175098 NA other upstream 528057 2602414 ~ 2603211 (-)
G175048 zfhx3,LOC107679901,LOC107565374,LOC107738341 other upstream 679998 2754355 ~ 2756525 (-)
serf2 NA other upstream 1475508 3549865 ~ 3581987 (-)
G175497 NA other upstream 1494984 3569341 ~ 3572262 (-)
mical2a mical2 other upstream 1777490 3851847 ~ 3909893 (-)

Expression


Co-expression Network