G174970


Basic Information

Item Value
gene id G174970
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047605.1
NCBI id CM018551.1
chromosome length 26640196
location 2476635 ~ 2476835 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU207073
gtttatcttattttatattgtaacaagtaaatttttttaacacactgtTTTAACAGGTTCGGTATGTCTAGCatgtctttgttgttgttgttgttgttgttgttgttttctatTTAAATGCTTGTTTTAACAAGTTGGATATGTCCAGTTTTTTTAACCCGTTGTGTTTTAACAGGTTCGCTCTGTCCAGTATGatttttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU207073 True 201 lncRNA 0.30 1 2476635 2476835

Neighbor

gene id symbol gene type direction distance location
hnf4b LOC108271394,LOC108429112 coding downstream 160500 2301621 ~ 2316135 (-)
marveld3 marveld3 coding downstream 294250 2178548 ~ 2182385 (-)
LOC113536684 znf821 coding downstream 404362 2054212 ~ 2072273 (-)
LOC113536364 LOC108271342 coding downstream 466013 1996794 ~ 2010622 (-)
tp53i11a tp53i11,tp53i11a,LOC107687052,LOC108435353,LOC107671372 coding downstream 496956 1936826 ~ 1979679 (-)
dhx38 dhx38,LOC106562086,LOC106587179 coding upstream 499624 2976459 ~ 2997108 (-)
LOC113536623 LOC108270986,LOC105889116,LOC107659108 coding upstream 527100 3003935 ~ 3008616 (-)
zgc:162592 LOC108270985 coding upstream 543719 3020554 ~ 3023480 (-)
cpne7 cpne7,LOC107715467,LOC107738346 coding upstream 599143 3075978 ~ 3128645 (-)
rpl13 rpl13 coding upstream 659601 3136436 ~ 3141997 (-)
G174949 NA non-coding downstream 37798 2438615 ~ 2438837 (-)
G174929 NA non-coding downstream 64668 2411672 ~ 2411967 (-)
G174708 NA non-coding downstream 199268 2277046 ~ 2277367 (-)
G174680 NA non-coding downstream 210888 2222613 ~ 2265747 (-)
G174674 NA non-coding downstream 269330 2174167 ~ 2207305 (-)
G174987 NA non-coding upstream 13467 2490302 ~ 2490506 (-)
G175030 NA non-coding upstream 59795 2536630 ~ 2536840 (-)
G175097 NA non-coding upstream 130173 2607008 ~ 2607455 (-)
G175099 NA non-coding upstream 132094 2608929 ~ 2609186 (-)
G175100 NA non-coding upstream 133239 2610074 ~ 2611557 (-)
LOC113536731 hsbp1b,hsbp1a,LOC108271362,LOC103023435,LOC108429110,LOC107553992,LOC107583924,LOC107561694 other downstream 454404 2014722 ~ 2022231 (-)
cd82a cd82 other downstream 543413 1856883 ~ 1933222 (-)
G174247 fbxo22 other downstream 1417401 1057656 ~ 1059234 (-)
fbxl8 fbxl8 other downstream 1473603 999059 ~ 1003032 (-)
G174207 LOC108270943,LOC108444425 other downstream 1513557 961496 ~ 963078 (-)
G175098 NA other upstream 125579 2602414 ~ 2603211 (-)
G175048 zfhx3,LOC107679901,LOC107565374,LOC107738341 other upstream 277520 2754355 ~ 2756525 (-)
serf2 NA other upstream 1073030 3549865 ~ 3581987 (-)
G175497 NA other upstream 1092506 3569341 ~ 3572262 (-)
mical2a mical2 other upstream 1375012 3851847 ~ 3909893 (-)

Expression


Co-expression Network