ric3a


Basic Information

Item Value
gene id ric3a
gene name NA
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047605.1
NCBI id CM018551.1
chromosome length 26640196
location 267730 ~ 272572 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_034308875.1
ATGTTGGTTTCAGGGATTCAGAGGATCACTTTGCTCTCTTGTCTCGTCCTCTCCGTGGCTCTGTTTTTGCCCAAACTGTTTTTATCTGCAGGGGAGGAGAAGCTGCTTCTTCACTCAGAGGGAGAAGATGATCAGTGGACACCTGAATCACTTTACACAACACGTCAGAACCCCGAGACCTTTTCCCACACGAAGACTCTTCGGAAATCCACACTCCTCGCTCAAGTCACTCCTATTTACGGCTTTGGAATCTTCCTCTACATCATCTACATATTCTATAAgCTTTCACAGAAAGACAGAGCTACAAAACAGCGATGCAGCTTCTCCATCATGACGcctgaacacacagcacaggaaATGTCTGAAGATGAGACGGCTCAGCTACAGACCAGAATAAAACAGAtggaaggacagagagagaggagaacatCAACATCTGTCCCAGATCCTGCAAGGTGTCGTAAGGACAGAAGTGGACGTGAGGAGAGAAAACTCCAGGACCTGACGAAGATCACACACATGCTGGTGGAGGGACGGCCGCTGGAAGACGTCACCCCTGAGGTGGAAGCTGAGGAAACCCCGTATTCTGCAGACTGGGAGGGTTATGCAGAAGAGACCTTTCCTCAGTATGAGGTGCCGCTGTGCAGACGTCGATATCCAAGTGTCATCCTGGAGGAGCCATACGGAGATGTTCCTACACCTGAGGAACTGGCTGAAAGAATGGAGAGagaagatgaggaggatgaaaagaatgaagaagagacagaagaagTGAAGGATGAGTGCAGTGAAGATGAAGGGATAAAGGGTGATGGTGATCTCAAACAGGCACTACTcgaaaaaggagaagaaacagATGATAATGAAGGTGATGCTGATGAAGAAGATTATAAAcaggatgaagaggaagaggaggaagttGGTGAACCTTGTCTGGCTCATAATTCTACTGATGAAGAGGAGACACCAGGAAATCAGAAGGAAGGAGAAACATCCAGCAGGAGAAAACAGATAACGTTCAGTAATCACAGGCACGTCTTCCACTATCCAAAAGGAGGCGCTGTTGGCTGCAGTTATGAAGAtgaggaggtggaggaagaCGCacctgaagatgatgatgatgatgatgatgatgatgatgtggtggAGGATAAgcaggatgaagatgatgatctaaaggagatggagatggagagggagGAGGACGACCCGCTGATGGAGGCTGAGCGTCTGGGCTTCAGCACTCAGTTCACATGTGATCCTGAAGAACAGGAAGTTGATCTGATCGACTTCCTTCTCACATATAAACCTGAAGCTGTGATTAAGTCCGACCAATCAGGAGCAGCTGAAGCTCCAGGGCTCAGGATGCGCTACAAGAACCAGAAAAAGGAAAACTGAGCTGATCAGCAACACCGTCCACAGGAAGTCCAGAGGAAATGCAGAGGAAATGCAGAGGAATTCCAGAGGAAATGCAGAGGAATTCCAGAGGAAATGCAGAGGAAATGCAGAGGAAATGCAGAGGAAATGCAGAGGAAATGCAGAGGAAATGCAGAGGAAATGCAGAGGAATTCCAGGCTCTGATAAGGATTTACTTTTACTctagatgtttaaaaaaactcagagtgttgtgtgtttttctccgtGTTTCTGACTCCAGTATCTAAAAAAGCATTAAGTtgtaatttataaatgtgaCTTTAGAAgttatgttgtttttgtttgtttgtttgtttgtttgttttgtcaagAGTTTTTCATTGGAATTATGATGGAAGGTGTGAGGTGGCagagatgcaagtgcaggtgaCTTTTACACAAAACAGGCAAACACGAGATCAAAAGTCCTGGTATCATCACAAGCAAGTCgag

Function

NR:

description
protein RIC-3-like isoform X4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_034308875.1 True 1869 mRNA 0.46 6 267730 272572

Neighbor

gene id symbol gene type direction distance location
pde3b pde3b coding downstream 171600 45726 ~ 96130 (-)
lmo1 lmo1,rbtn1,LOC107085592,LOC107593328 coding upstream 26652 299224 ~ 335808 (-)
stk33 stk33,LOC106562365 coding upstream 176045 448617 ~ 470183 (-)
rerglb rerglb,LOC108271353,LOC108429104,LOC107674441,LOC107593310,LOC107586038 coding upstream 201259 473831 ~ 480942 (-)
trim66 trim66,LOC107750616 coding upstream 214073 486645 ~ 511403 (-)
dennd2b st5 coding upstream 241584 514156 ~ 584811 (-)
G173639 NA non-coding downstream 1192 263184 ~ 266538 (-)
G173586 NA non-coding downstream 52269 155542 ~ 215461 (-)
G173603 NA non-coding downstream 80568 185451 ~ 187162 (-)
G173602 NA non-coding downstream 81916 184027 ~ 185814 (-)
G173581 NA non-coding downstream 128594 138193 ~ 139136 (-)
G173685 NA non-coding upstream 183292 455864 ~ 456185 (-)
G174054 NA non-coding upstream 234210 506782 ~ 519973 (-)
G174074 NA non-coding upstream 295841 568413 ~ 569242 (-)
G174127 NA non-coding upstream 523822 796394 ~ 798832 (-)
G174147 NA non-coding upstream 551067 823639 ~ 823896 (-)
calca calca,LOC108271361,LOC107700617,LOC107593372,LOC107688176,LOC107750650,LOC107586036 other downstream 233564 30281 ~ 34166 (-)
G174207 LOC108270943,LOC108444425 other upstream 688924 961496 ~ 963078 (-)
fbxl8 fbxl8 other upstream 726487 999059 ~ 1003032 (-)
G174247 fbxo22 other upstream 785084 1057656 ~ 1059234 (-)
cd82a cd82 other upstream 1584311 1856883 ~ 1933222 (-)
LOC113536731 hsbp1b,hsbp1a,LOC108271362,LOC103023435,LOC108429110,LOC107553992,LOC107583924,LOC107561694 other upstream 1742150 2014722 ~ 2022231 (-)

Expression


Co-expression Network