LOC113536793


Basic Information

Item Value
gene id LOC113536793
gene name NA
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047605.1
NCBI id CM018551.1
chromosome length 26640196
location 3138827 ~ 3138907 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XR_003403703.1
TGATGACAAATTCTCCGGAATCTCTGTACATCTTTGATGATCCTCCTTGAACCCTTTGTGCTGATGACTGCTCTGCTCGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_003403703.1 True 81 ncRNA 0.46 1 3138827 3138907

Neighbor

gene id symbol gene type direction distance location
cpne7 cpne7,LOC107715467,LOC107738346 coding downstream 10182 3075978 ~ 3128645 (-)
zgc:162592 LOC108270985 coding downstream 115347 3020554 ~ 3023480 (-)
LOC113536623 LOC108270986,LOC105889116,LOC107659108 coding downstream 130211 3003935 ~ 3008616 (-)
dhx38 dhx38,LOC106562086,LOC106587179 coding downstream 141719 2976459 ~ 2997108 (-)
hnf4b LOC108271394,LOC108429112 coding downstream 822692 2301621 ~ 2316135 (-)
LOC113536794 NA coding upstream 1163 3140070 ~ 3140161 (-)
gcshb LOC108270992 coding upstream 5875 3144782 ~ 3152111 (-)
kars1 kars,LOC102775760 coding upstream 16634 3155541 ~ 3167279 (-)
nfat5b LOC108271072 coding upstream 30416 3169323 ~ 3219284 (-)
pkd1l2b NA coding upstream 95163 3234070 ~ 3252896 (-)
G175213 NA non-coding downstream 131165 3007004 ~ 3007662 (-)
G175046 NA non-coding downstream 372222 2760210 ~ 2766605 (-)
G175045 zfhx3,LOC107738341,LOC107659104 non-coding downstream 379001 2756832 ~ 2759826 (-)
G175110 NA non-coding downstream 407954 2729695 ~ 2730873 (-)
G175109 NA non-coding downstream 413074 2725094 ~ 2725753 (-)
G175329 NA non-coding upstream 66350 3205257 ~ 3205466 (-)
G175330 NA non-coding upstream 67844 3206751 ~ 3206971 (-)
G175333 NA non-coding upstream 71240 3210147 ~ 3210404 (-)
G175483 NA non-coding upstream 373084 3511991 ~ 3512232 (-)
LOC113536694 NA non-coding upstream 433751 3572658 ~ 3577973 (-)
G175048 zfhx3,LOC107679901,LOC107565374,LOC107738341 other downstream 382302 2754355 ~ 2756525 (-)
G175098 NA other downstream 535616 2602414 ~ 2603211 (-)
LOC113536731 hsbp1b,hsbp1a,LOC108271362,LOC103023435,LOC108429110,LOC107553992,LOC107583924,LOC107561694 other downstream 1116596 2014722 ~ 2022231 (-)
cd82a cd82 other downstream 1205605 1856883 ~ 1933222 (-)
G174247 fbxo22 other downstream 2079593 1057656 ~ 1059234 (-)
serf2 NA other upstream 410958 3549865 ~ 3581987 (-)
G175497 NA other upstream 430434 3569341 ~ 3572262 (-)
mical2a mical2 other upstream 712940 3851847 ~ 3909893 (-)
bola3 bola3,LOC107686851,LOC107727091 other upstream 853819 3992726 ~ 3996453 (-)
lto1 oraov1 other upstream 1360039 4498946 ~ 4504329 (-)

Expression


Co-expression Network