LOC113536794


Basic Information

Item Value
gene id LOC113536794
gene name NA
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047605.1
NCBI id CM018551.1
chromosome length 26640196
location 3140070 ~ 3140161 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XR_003403704.2
TGATGACAAATTCTCCGGAATCTCTGTACATCTTCTGATGATTCTCCTTGAACCCTTTTTGCTGATGACTGTTGTGCTCAAGACAAATGATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_003403704.2 True 92 ncRNA 0.40 1 3140070 3140161

Neighbor

gene id symbol gene type direction distance location
LOC113536793 NA coding downstream 1163 3138827 ~ 3138907 (-)
cpne7 cpne7,LOC107715467,LOC107738346 coding downstream 11425 3075978 ~ 3128645 (-)
zgc:162592 LOC108270985 coding downstream 116590 3020554 ~ 3023480 (-)
LOC113536623 LOC108270986,LOC105889116,LOC107659108 coding downstream 131454 3003935 ~ 3008616 (-)
dhx38 dhx38,LOC106562086,LOC106587179 coding downstream 142962 2976459 ~ 2997108 (-)
gcshb LOC108270992 coding upstream 4621 3144782 ~ 3152111 (-)
kars1 kars,LOC102775760 coding upstream 15380 3155541 ~ 3167279 (-)
nfat5b LOC108271072 coding upstream 29162 3169323 ~ 3219284 (-)
pkd1l2b NA coding upstream 93909 3234070 ~ 3252896 (-)
LOC113536785 NA coding upstream 128283 3268444 ~ 3269415 (-)
G175213 NA non-coding downstream 132408 3007004 ~ 3007662 (-)
G175046 NA non-coding downstream 373465 2760210 ~ 2766605 (-)
G175045 zfhx3,LOC107738341,LOC107659104 non-coding downstream 380244 2756832 ~ 2759826 (-)
G175110 NA non-coding downstream 409197 2729695 ~ 2730873 (-)
G175109 NA non-coding downstream 414317 2725094 ~ 2725753 (-)
G175329 NA non-coding upstream 65096 3205257 ~ 3205466 (-)
G175330 NA non-coding upstream 66590 3206751 ~ 3206971 (-)
G175333 NA non-coding upstream 69986 3210147 ~ 3210404 (-)
G175483 NA non-coding upstream 371830 3511991 ~ 3512232 (-)
LOC113536694 NA non-coding upstream 432497 3572658 ~ 3577973 (-)
G175048 zfhx3,LOC107679901,LOC107565374,LOC107738341 other downstream 383545 2754355 ~ 2756525 (-)
G175098 NA other downstream 536859 2602414 ~ 2603211 (-)
LOC113536731 hsbp1b,hsbp1a,LOC108271362,LOC103023435,LOC108429110,LOC107553992,LOC107583924,LOC107561694 other downstream 1117839 2014722 ~ 2022231 (-)
cd82a cd82 other downstream 1206848 1856883 ~ 1933222 (-)
G174247 fbxo22 other downstream 2080836 1057656 ~ 1059234 (-)
serf2 NA other upstream 409704 3549865 ~ 3581987 (-)
G175497 NA other upstream 429180 3569341 ~ 3572262 (-)
mical2a mical2 other upstream 711686 3851847 ~ 3909893 (-)
bola3 bola3,LOC107686851,LOC107727091 other upstream 852565 3992726 ~ 3996453 (-)
lto1 oraov1 other upstream 1358785 4498946 ~ 4504329 (-)

Expression


Co-expression Network