trnai-uau_1


Basic Information

Item Value
gene id trnai-uau_1
gene name NA
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047605.1
NCBI id CM018551.1
chromosome length 26640196
location 5290502 ~ 5290594 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>trnai-uau_1
GCTCCAGTGGCGCAATCGGTTAGCGCGCGGTACTTATAATGCCGAGGTTGTGAGTTCGAGCCTCACCTGGAGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnai-uau_1 True 74 tRNA 0.59 2 5290502 5290594

Neighbor

gene id symbol gene type direction distance location
chrna7a chrna7,LOC108270560,LOC108434558,LOC107748270,LOC107679711,LOC107686877 coding downstream 70263 5199143 ~ 5220239 (-)
znf609b LOC108271255,LOC108434576,LOC107679726,LOC107748266,LOC107738902 coding downstream 156952 5081652 ~ 5133550 (-)
gramd2aa gramd2,LOC108270961,LOC107748265,LOC106562775 coding downstream 216200 5047351 ~ 5074302 (-)
myo9aa myo9a coding downstream 257608 4923363 ~ 5032894 (-)
scamp2l LOC108271388 coding downstream 371243 4907933 ~ 4919259 (-)
trnai-uau_2 NA coding upstream 23568 5314162 ~ 5314254 (-)
cdhr5a LOC108270552,LOC108412775 coding upstream 27758 5318352 ~ 5325458 (-)
sirt3 sirt3,LOC107663051 coding upstream 69824 5360418 ~ 5366235 (-)
LOC113536772 LOC108270937,LOC108412780,LOC107730181,LOC107561442,LOC562097,LOC107663023,LOC106562562,LOC108250636 coding upstream 117002 5407596 ~ 5418681 (-)
nqo1 nqo1 coding upstream 129402 5419996 ~ 5446722 (-)
G176336 NA non-coding downstream 177234 5110114 ~ 5113268 (-)
G176029 NA non-coding downstream 443361 4840748 ~ 4847141 (-)
G176028 NA non-coding downstream 449809 4839988 ~ 4840693 (-)
G176015 NA non-coding downstream 554086 4732382 ~ 4736416 (-)
G175967 NA non-coding downstream 657717 4630348 ~ 4632785 (-)
G176354 NA non-coding upstream 14020 5304614 ~ 5407099 (-)
G176556 NA non-coding upstream 341232 5631826 ~ 5715020 (-)
G176817 NA non-coding upstream 792234 6082828 ~ 6167802 (-)
G176816 LOC108271104 non-coding upstream 881604 6172198 ~ 6176354 (-)
G176832 NA non-coding upstream 893741 6184335 ~ 6188288 (-)
trip4 trip4 other downstream 93684 5139610 ~ 5196818 (-)
G176307 NA other downstream 209607 5079817 ~ 5080895 (-)
lto1 oraov1 other downstream 786173 4498946 ~ 4504329 (-)
bola3 bola3,LOC107686851,LOC107727091 other downstream 1294049 3992726 ~ 3996453 (-)
mical2a mical2 other downstream 1380609 3851847 ~ 3909893 (-)
LOC113536561 srsf7,LOC107665899,LOC107693014 other upstream 405786 5696380 ~ 5708304 (-)
LOC113536608 LOC108270551 other upstream 1566161 6856755 ~ 6861348 (-)
si:dkey-56d12.4 LOC108270721 other upstream 2189828 7480422 ~ 7484117 (-)
si:ch1073-365p7.2 NA other upstream 2289840 7580434 ~ 7588815 (-)
igf1rb LOC108271091 other upstream 2385322 7675916 ~ 7764430 (-)

Expression


Co-expression Network