gpr157 (gpr157,LOC108434350)


Basic Information

Item Value
gene id gpr157
gene name gpr157,LOC108434350
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047610.1
NCBI id CM018556.1
chromosome length 25111544
location 9431703 ~ 9437164 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026921441.2
TCTCTCATAAGGAGATACTGGGAGGAGTTAAAGTGACACCAACACAAGAaaagttctctctctcactctcacacacacttccatgttTTTCCTTCAAGTGTCGAAACTTGATTGAATTATTCGTAAGTCgaaaagaaagaatattttttagTTAACCACGAATTGAAAAGCTCCTGTAGGTTAAAACGCGACGCTTCGACGAAacagagtggggaaaaaaaatggagactCCTGACTGACTTTTCCTCACAGACTCTACACATGAAAGCAGGTCCTAATCCGGCTCGAGCGCCTCAGTGGAGCTGTTAGAGGAAGTCATGGCGGGGTGGGAACACACGGACGTGGCTGTGTATGAGCAGGTTGTGGTGTTGTTGTCGTGTGCTCTGTCGGTGTTGGGCTCTGTGCTGGTTATGAGCACGTACGCGGTATGGCCCGACCTGAGAACCACACCGAGACAGCTTCTAGTCTTCCTCTCTGTAGCTGACTTCCTCTCCGCTGTCTCCTACTCTTATGGAGTTTATAAGGTTTTTAACGCAAACACTTGGGACTGCGTCACGCAAGGAGCCGTTTCCACTTTCTCCAACACGAGCTCCTTCTTCTGGACTGTAGCCATTGCTGTGTACCTGTACATCTTCATCGTGAAGTCCAGTCAGAGACAAGCTGACAGTTTGGTCTTGTATTTTCATCTCATCAGTTGGGGTATTCCCCTGGCCATCACAGTAGCAGCTGTGTCCCTGCAGAAGATCGGCTATGATGCATCCGAGGTGTCCGTCGGATGGTGCTGGATCAGCATCAAGGAAGACGATCACGTGTTGTGGATGCTACTGACTGGCAAGATATGGGAACTGCTTGCCTATGTGATACTACCTGTGCTTTACATCCTCATCAAGAGACACATCCACAAAGCGCATGCAGCCCTCTCAGAGTACCGACCCATCTTGGCCTGTAACCAACTTTCCCGGTCAATTCCTGCAATGGCAGACAGAAAGCTCACCCTCATCCCCATCATCTTCATCGCACTGCGCATATGGAGCACTGTTCGCTTCGTGCTACTGCTCGTCGACTCTCCTGTCAGACAGAACCCTGTGCTGGTCACTTTACATGGAATCGGGAACACCTTTCAAGGAGCCGCCAACTGCATCATGTTTGTCCTGTGCACTCGGCCAGTACGTGCAAGACTAGTGGCTCGGCTCTGCTGCCGAAGACACGACACACAGGGCAACTCGGACGTGCCGTCTCAATACACAGctcgcacacactcactttctcacacagACAGGCCCAGTGTCTCCCACATGCGGGTGGATGAAAGCGAGGATGAGGAGTAGTCACTGTTAAAGTGAAAACCCTGCGGCTTGTTGACCTTCATTGCCTCAGCTAGAGCACCGCACTCAAACAAGCAGATCTGCAGCTTCTAGAAAAGTGTCCTTTCGCAGAAAAGTCAATGAGCTGTAAAGTGAAGACCGCCATGCTTTCTGCACAGAGGAgctggtgaatgtgtgtgtgggtgtcaaGTGCTCAAACTCCACTTTCCAAATTCACAGTGTGCCTTTGAGGATTAAAGAAGACTACAGTCACATGCTACAGTCCCTAGAGTCCAAGTGCACTTTATGTTCACAGTGTAGCAGTGCCATTTTGTATGCTAGCactttttttcacttaatttcaGCTCAGGGATGTGAGGATTTAGAGGTCATTTATAATTCAGTGACCAAAACATTGAACATACTGTGAGCATGCTATGCAAATACCTGAGACAATTTTCCTAACTAAACACATCTGGCAACACAGGGTGCCTTGAAGTGGACTAACATTGTATTTgaatttctgttttaaacaaAGTTGGATATGTATCATGTCTTTATTTAACTGTAACTAGACTGTTTTCTATTAAACATAATGGTGAAATCTGGTCTGGTGAAATCTACAGGATATCTGGAAAAAGATTACTGCTCCAGATCATTTATCTTTATACTCAAATATTTTACTTGAATAGAATTCAGTCAAAAAGGGGAATTGGTGGCTTTTAcatatatactttattgattttcaaagatgttttttataaatgttatggtttgtttttagttttttagtaAACTTACATTGACCAAGAGTCATTTGAACCTA

Function

symbol description
gpr157 Predicted to enable G protein-coupled receptor activity and cAMP binding activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway and cell surface receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human GPR157 (G protein-coupled receptor 157).

NR:

description
G-protein coupled receptor 157

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0016021 integral component of membrane cellular_component
GO:0030552 cAMP binding molecular_function
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG:

id description
K08467 GPR157; G protein-coupled receptor 157

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026921441.2 True 2130 mRNA 0.45 4 9431703 9437164

Neighbor

gene id symbol gene type direction distance location
LOC113530597 LOC108432612,LOC108276125,LOC108236859 coding downstream 6803 9417550 ~ 9424900 (-)
eno1a eno1,LOC108434336,LOC107703060,LOC107591100,LOC107716106,LOC103038459,LOC107593367,LOC107737561 coding downstream 25243 9395118 ~ 9406460 (-)
rerea rere,rerea,LOC107737560 coding downstream 43922 9221042 ~ 9387781 (-)
samd11 samd11,LOC107737557 coding downstream 262945 9110411 ~ 9168758 (-)
klhl17 klhl17,LOC107687417,LOC107572648,LOC107737556 coding downstream 364379 9048022 ~ 9067324 (-)
rap1gap LOC108276112,LOC108434374,LOC107716101 coding upstream 80123 9517287 ~ 9603357 (-)
slc2a1a LOC108276488,LOC108434426,LOC106565867,LOC107703064,LOC107591105 coding upstream 215267 9652431 ~ 9663954 (-)
eif4g3b eif4g3,LOC108434436 coding upstream 292210 9729374 ~ 9765854 (-)
lactbl1a LOC108275962 coding upstream 337319 9774483 ~ 9780995 (-)
dhrs3a dhrs3,dhrs3a,LOC108275517,LOC107703071,LOC107712670,LOC107737702,LOC107593436,LOC107687474 coding upstream 485014 9922178 ~ 9928130 (-)
G251902 NA non-coding downstream 44776 9312676 ~ 9386927 (-)
G251868 NA non-coding downstream 47492 9371953 ~ 9384211 (-)
G251904 NA non-coding downstream 68193 9315682 ~ 9363510 (-)
G251909 NA non-coding downstream 69575 9359834 ~ 9362128 (-)
G251903 NA non-coding downstream 107868 9310040 ~ 9323835 (-)
G251922 NA non-coding upstream 1337 9438501 ~ 9438811 (-)
G251924 NA non-coding upstream 2183 9439347 ~ 9439636 (-)
LOC117599283 NA non-coding upstream 12133 9449297 ~ 9452168 (-)
G251955 NA non-coding upstream 51106 9488270 ~ 9489863 (-)
G251963 NA non-coding upstream 60926 9498090 ~ 9498301 (-)
ttll10 ttll10 other downstream 853103 8566656 ~ 8578600 (-)
ctnnbip1 ctnnbip1 other downstream 1921912 7476205 ~ 7509791 (-)
nmnat1 nmnat1 other downstream 2023446 7399793 ~ 7408257 (-)
c16h1orf127 c15h1orf127,tardbp,LOC107570713 other downstream 2107757 7249631 ~ 7323946 (-)
rps26 rps26,LOC103039794,LOC108433306,LOC100304575 other downstream 3123830 6304844 ~ 6307873 (-)
LOC117599234 LOC108275963 other upstream 331083 9768247 ~ 9771563 (-)
G252373 NA other upstream 592328 10029492 ~ 10029993 (-)
usp21 LOC108276040,LOC108432659 other upstream 1023530 10460694 ~ 10469796 (-)
sinup NA other upstream 1199337 10636501 ~ 10638718 (-)
LOC113530950 smim4,zgc:193598,LOC108436318,LOC108276132,LOC107570281 other upstream 1572299 11009463 ~ 11015666 (-)

Expression


Co-expression Network