G368689


Basic Information

Item Value
gene id G368689
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047620.1
NCBI id CM018566.1
chromosome length 19313417
location 185834 ~ 193914 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU436781
ctggaatggtgactgcaccccaggcctacATGCCCAGCaccagtacctgacctcactaaagctgTCGTGGgtcaatgggcaaatccccacagccacgctccaaaatgtagtggaaagccttcccagaggagtggaggataacagcaaattgggactaaatctggaacgggatgttcaacaagcacatgctgtatgaatgttgTCACAGGTGTCCActaacgtttggc

Function

NR:

description
Na-K-2Cl cotransporter-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU436781 True 227 lncRNA 0.52 2 185834 193914

Neighbor

gene id symbol gene type direction distance location
rnf175 rnf175,LOC107665971,LOC107692639,LOC107714147 coding downstream 23853 154481 ~ 161981 (-)
fgb fgb,LOC107758871 coding downstream 55473 125530 ~ 130361 (-)
LOC113524573 lratb,LOC108258974,LOC108439370,LOC107758869,LOC107590749,LOC106608435 coding downstream 72094 92135 ~ 113740 (-)
LOC113524574 LOC108258977 coding downstream 93814 83803 ~ 92020 (-)
lratb.2 LOC108258976 coding downstream 102044 78214 ~ 83790 (-)
pdia2 LOC108258683 coding upstream 34534 228448 ~ 234976 (-)
percc1 LOC108258685 coding upstream 40985 234899 ~ 244174 (-)
rgs11 rgs11 coding upstream 68239 262153 ~ 277683 (-)
elfn1b elfn1b,LOC108258545,LOC108439159,LOC107722936,LOC107590768,LOC107702506,LOC107714143 coding upstream 158539 352453 ~ 408289 (-)
uncx4.1 LOC108258667 coding upstream 324690 518604 ~ 525065 (-)
G368685 NA non-coding downstream 1188 179182 ~ 184646 (-)
G368713 NA non-coding upstream 50263 244177 ~ 244780 (-)
G368725 NA non-coding upstream 87525 281439 ~ 281903 (-)
G368903 NA non-coding upstream 384679 578593 ~ 581860 (-)
G368912 NA non-coding upstream 477726 671640 ~ 673030 (-)
G368944 NA non-coding upstream 507170 701084 ~ 701288 (-)
si:dkeyp-75b4.8 NA other upstream 8740 202654 ~ 227102 (-)
pmm2 pmm2,LOC107692644,LOC101469678,LOC102299325,LOC100707130,LOC102200931,LOC107082664 other upstream 90949 284863 ~ 289908 (-)
rasd3 LOC108258668 other upstream 397222 591136 ~ 592595 (-)
prkcba prkcb other upstream 459539 653453 ~ 702345 (-)
zgc:77849 zgc:77849,LOC108258689,LOC103038624,LOC108439082,LOC107722949,LOC107692663,LOC107590708 other upstream 675845 869759 ~ 948803 (-)

Expression


Co-expression Network