mzt1 (mzt1,si:dkey-15d12.2,LOC107556706)


Basic Information

Item Value
gene id mzt1
gene name mzt1,si:dkey-15d12.2,LOC107556706
gene type misc
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047620.1
NCBI id CM018566.1
chromosome length 19313417
location 12078891 ~ 12084049 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU443757
TATAGCGAAACTTTATTGATACGGTTCTTGTTAACGTGAAATGTGAATGGACCTCAATCTATAAATCTGTTATCGAGAGAGCTATCTATACAGGTGTGAACTCGTTTTTTTATAGTAACGTGAAGAATACTTAGGGATCGGAGAGAAAACCCCAGACGGAGAGGAAGAAAGGAGTGTTGTTGCTAAGCTAGCGGTCATGGCTAGTGCCGCGAATACAAACATGAACGCTGTCCGGGAAACGATGGACGtTCTCCTGGAGATCTCAAGACTCCTTAACACTGGGCTCGACATGGAGTCGTTGTCCATCTGCGTGCGGCTGTGTGAGCAGGGCATCAACCCCGAAGCGCTCTCATCAGTTATAAAGGAGCTACGCAGAGCCACGGACACACTTAAGGCCTCTGACAACAGCACAAGCCAAGGATAAGTCACACCAGGCTCAATGGCTTTGCTCGGAGAAATTGCTCTAGAAGAAATTTCATCAATTCACCAAGAGATACTTAATAAGGGAATTTTTGTTCTCCATTTTCCCTTCagccttgtttttatttaatattttttttgtctttgtaaaATGACTTCCTTTTGTCTGTGCTCAAGTGAACTTGTGTGCTTTCATATATCcagtattttaaatgtatgtttccgtattttaattgttataaaatGACATGTCTGTCATTGTTATAAAAGTTTGTTTTGCCTATGAAGATGAGAGATTTTGTATTGGCTTACACTGTGGCTGATTTGTTTGTTGTGAGATGTCATGAGATTTCAGCACACAGCTGGACAGGGATAACACAGCTATATAAGCAGGatttgtgctgtgtgtttgtgttgtttgtccACTAGGTGGAGACAACGTGCAGCTCTGAGTCTTCTTGTAGCCTGTTAGACTGTGTGATTATGGCCAGGTCTGTCGTTAACAATGAGATCACTGGACCTTACTGTTAAAAAACCTGACTGATGTATGTGTTCGGTTTATGCTCCTGTTATACGTACTAGTGTGTAAAGTTTGCAATAGAACATTTCACgtacatcatttattcatttgttagaATCTTGTATCCGAACCCACTTACAGTGTCAGAAAAAGGGGTAGTGTACAGGTACGGTTGTGTTCCTCAAACTACTGTACAATGTAAATTAACCCACAACGATGCAACAGTTAGGTCCAACTTTTTACCCTAATGGTGTTTCTTTACaaataaaggtacaaaacaaTAAGTGTGTGTATCGTAAAACCCAGGTTTAGTAGCTCTTTGTCTGAGAGTGTAAACGtcaatccaatccaatccaagcCAATCTAAACATCTCGCTGTGAAGTTGagggcttttttattttatttttttgctcaaGCAGTCCTGTGATCTGAACTCAGAGAAACTTAAACTCCTATTGAACCTAAATCTCTGACTGCATTCTACATACTCAGAAATGGAAGCACGTACGTACATTAAAAAGTGCTTACAGATTTACGTTAATCCCCTACTTCCTTAAATGTTCATTTGGACATTCCAAGTTACTCGTTGCATGGCACAAATATCATAACTCAAGGGC
>XM_026931998.2
TTTCACTTCCGTTCAAATATAGCGAAACTTTATTGATACGGTTCTTGTTAACGTGAAATGTGAATGGACCTCAATCTATAAATCTGTTATCGAGAGAGCTATCTATACAGGTGTGAACTCGTTTTTTTATAGTAACGTGAAGAATACTTAGGGATCGGAGAGAAAACCCCAGACGGAGAGGAAGAAAGGAGTGTTGTTGCTAAGCTAGCGGTCATGGCTAGTGCCGCGAATACAAACATGAACGCTGTCCGGGAAACGATGGACGtTCTCCTGGAGATCTCAAGACTCCTTAACACTGGGCTCGACATGGAGTCGTTGTCCATCTGCGTGCGGCTGTGTGAGCAGGGCATCAACCCCGAAGCGCTCTCATCAGTTATAAAGGAGCTACGCAGAGCCACGGACACACTTAAGGCCTCTGACAACAGCACAAGCCAAGGATAAGTCACACCAGGCTCAATGGCTTTGCTCGGAGAAATTGCTCTAGAAGAAATTTCATCAATTCACCAAGAGATACTTAATAAGGGAATTTTTGTTCTCCATTTTCCCTTCagccttgtttttatttaatattttttttgtctttgtaaaATGACTTCCTTTTGTCTGTGCTCAAGTGAACTTGTGTGCTTTCATATATCcagtattttaaatgtatgtttccgtattttaattgttataaaatGACATGTCTGTCATTGTTATAAAAGTTTGTTTTGCCTATGAAGATGAGAGATTTTGTATTGGCTTACACTGTGGCTGATTTGTTTGTTGTGAGATGTCATGAGATTTCAGCACACAGCTGGACAGGGATAACACAGCTATATAAGCAGGatttgtgctgtgtgtttgtgttgtttgtccACTAGGTGGAGACAACGTGCAGCTCTGAGTCTTCTTGTAGCCTGTTAGACTGTGTGATTATGGCCAGGTCTGTCGTTAACAATGAGATCACTGGACCTTACTGTTAAAAAACCTGACTGATGTATGTGTTCGGTTTATGCTCCTGTTATACGTACTAGTGTGTAAAGTTTGCAATAGAACATTTCACgtacatcatttattcatttgttagaATCTTGTATCCGAACCCACTTACAGTGTCAGAAAAAGGGGTAGTGTACAGGTACGGTTGTGTTCCTCAAACTACTGTACAATGTAAATTAACCCACAACGATGCAACAGTTAGGTCCAACTTTTTACCCTAATGGTGTTTCTTTACaaataaaggtacaaaacaaTAAGTGTGTGTATCGTAAAACCCAGGTTTAGTAGCTCTTTGTCTGAGAGTGTAAACGtcaa

Function

symbol description
mzt1 Predicted to be involved in gamma-tubulin complex localization. Predicted to be located in centrosome and spindle. Predicted to be part of gamma-tubulin large complex. Orthologous to human MZT1 (mitotic spindle organizing protein 1).

NR:

description
PREDICTED: mitotic-spindle organizing protein 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU443757 True 1558 lncRNA 0.40 3 12078891 12084032
XM_026931998.2 False 1299 mRNA 0.40 3 12079167 12084049

Neighbor

gene id symbol gene type direction distance location
dachc LOC108259061,LOC108435962,LOC107732708,LOC107602747 coding downstream 17506 11997011 ~ 12061385 (-)
ubac2 ubac2 coding downstream 93996 11956736 ~ 11984895 (-)
LOC113537469 LOC108258698,LOC108435966 coding downstream 125678 11945834 ~ 11953213 (-)
LOC117596169 igf2bp2,igf2bp2a,LOC108435967,LOC107752879,LOC107668393,LOC107749880 coding downstream 135796 11941152 ~ 11943095 (-)
igf2bp2b igf2bp2,LOC108435967,LOC107699092,LOC107704342,LOC107596519 coding downstream 141764 11891674 ~ 11937127 (-)
dis3 dis3,LOC107699072 coding upstream 9273 12093322 ~ 12107492 (-)
dlx2b LOC108258656 coding upstream 49426 12133475 ~ 12164139 (-)
ppp1r9alb LOC108258654,LOC105911690 coding upstream 108172 12192221 ~ 12215715 (-)
kcnq5b LOC108258980 coding upstream 147671 12231720 ~ 12336307 (-)
rims1b LOC108259070,LOC108441990 coding upstream 259145 12343194 ~ 12399766 (-)
G374680 NA non-coding downstream 114110 11963804 ~ 11964781 (-)
G374657 igf2bp2,igf2bp2a,LOC108435967,LOC107752879,LOC107668393 non-coding downstream 135816 11934534 ~ 11943075 (-)
G374495 c26h3orf70 non-coding downstream 323776 11752574 ~ 11755115 (-)
G374442 NA non-coding downstream 409635 11668993 ~ 11669256 (-)
G374371 NA non-coding downstream 482652 11595192 ~ 11596239 (-)
G374727 NA non-coding upstream 8463 12092512 ~ 12092736 (-)
G374885 NA non-coding upstream 74659 12158708 ~ 12158915 (-)
G374935 NA non-coding upstream 238915 12322964 ~ 12323575 (-)
G374961 LOC108258298,LOC108258985,LOC108258304 non-coding upstream 352723 12436772 ~ 12437220 (-)
G374962 NA non-coding upstream 353307 12437356 ~ 12437686 (-)
lipt1 lipt1 other downstream 1206335 10871224 ~ 10872556 (-)
cab39l cab39l,LOC107676861,LOC107718429 other downstream 1643524 10422152 ~ 10435367 (-)
LOC117596103 LOC102201964,LOC102304430 other downstream 2160112 9878843 ~ 9918779 (-)
tsga10 LOC108258346 other downstream 3468050 8591407 ~ 8610841 (-)
LOC113537606 nhlh2,LOC108258389,LOC103035065,LOC108434665,LOC107739819,LOC105019883 other downstream 3646453 8429562 ~ 8432438 (-)
LOC113537246 NA other upstream 541002 12625051 ~ 12630403 (-)
gyg2 gyg2 other upstream 1223664 13307713 ~ 13320530 (-)
G375428 NA other upstream 1355170 13439219 ~ 13439535 (-)
klf5a LOC108259069 other upstream 1888287 13972336 ~ 13980251 (-)
pibf1 pibf1 other upstream 1898696 13982745 ~ 14016151 (-)

Expression


Co-expression Network