G375001


Basic Information

Item Value
gene id G375001
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047620.1
NCBI id CM018566.1
chromosome length 19313417
location 12526620 ~ 12526819 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU444089
CTTGAGCACCCCTGGATTAAAGATATGTATGATCCCACTTTCCACTGATTCTTTGGGTCATGCCTACCATGATGCTAATTTCTGCCATACTGGATTGAATTTTTTCACAAACAcagtttttcctttcttctcccCACAAAGTTTGTTCAATCCTCACGAAATTTGAGGGATGGTTTATCCATAGTGCACAAACAAATTTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU444089 True 200 lncRNA 0.39 1 12526620 12526819

Neighbor

gene id symbol gene type direction distance location
inab ina coding downstream 55009 12465957 ~ 12471611 (-)
lbx1b LOC108258340 coding downstream 106065 12418468 ~ 12420555 (-)
cenpk cenpk coding downstream 113589 12407030 ~ 12413031 (-)
rims1b LOC108259070,LOC108441990 coding downstream 126854 12343194 ~ 12399766 (-)
kcnq5b LOC108258980 coding downstream 190313 12231720 ~ 12336307 (-)
as3mt as3mt coding upstream 9678 12536497 ~ 12546423 (-)
wbp1lb LOC108259041 coding upstream 36185 12563004 ~ 12570298 (-)
poll poll coding upstream 44220 12571039 ~ 12578393 (-)
fgf8b fgf8,fgf8b,LOC108258517,LOC107699081,LOC107568785,LOC107602739,LOC107738466,LOC107704317 coding upstream 58907 12585726 ~ 12592448 (-)
slc2a15b LOC108258984,LOC108435958,LOC107708658,LOC107704318,LOC107602731,LOC107699075 coding upstream 82234 12609053 ~ 12622350 (-)
G374963 NA non-coding downstream 85081 12441321 ~ 12441539 (-)
G374962 NA non-coding downstream 88934 12437356 ~ 12437686 (-)
G374961 LOC108258298,LOC108258985,LOC108258304 non-coding downstream 89400 12436772 ~ 12437220 (-)
G374935 NA non-coding downstream 203045 12322964 ~ 12323575 (-)
G374885 NA non-coding downstream 367705 12158708 ~ 12158915 (-)
G375018 NA non-coding upstream 33782 12560601 ~ 12560825 (-)
G375027 NA non-coding upstream 57626 12584445 ~ 12584659 (-)
G375028 NA non-coding upstream 58341 12585160 ~ 12585597 (-)
G375097 NA non-coding upstream 169196 12696015 ~ 12697218 (-)
G375119 NA non-coding upstream 214606 12741425 ~ 12741652 (-)
mzt1 mzt1,si:dkey-15d12.2,LOC107556706 other downstream 442571 12078891 ~ 12084049 (-)
lipt1 lipt1 other downstream 1654064 10871224 ~ 10872556 (-)
cab39l cab39l,LOC107676861,LOC107718429 other downstream 2091253 10422152 ~ 10435367 (-)
LOC117596103 LOC102201964,LOC102304430 other downstream 2607841 9878843 ~ 9918779 (-)
tsga10 LOC108258346 other downstream 3915779 8591407 ~ 8610841 (-)
LOC113537246 NA other upstream 98232 12625051 ~ 12630403 (-)
gyg2 gyg2 other upstream 780894 13307713 ~ 13320530 (-)
G375428 NA other upstream 912400 13439219 ~ 13439535 (-)
klf5a LOC108259069 other upstream 1445517 13972336 ~ 13980251 (-)
pibf1 pibf1 other upstream 1455926 13982745 ~ 14016151 (-)

Expression


Co-expression Network