pdia2 (LOC108258683)


Basic Information

Item Value
gene id pdia2
gene name LOC108258683
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047620.1
NCBI id CM018566.1
chromosome length 19313417
location 228448 ~ 234976 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026912253.2
GTGACTCGTCACCTTTAACACGTGTTTATCAGTGGTGTGAGGACAGAGCTTGAGAGCACTGCAGCCAAAAGCGTGTGAAATGAAGCCTGCATGCGCTCTGATCTTCGCTCTTCTCCTGCTGTGCACGAGGGCCGAGCCTGAGGCGGCTGAGGAGAATCCCGTCGCAGAGGACAAGAACGACACCGAGACCGAGAAGAAGGAAACGACAGATGAAATTACTGAGGAGAAACATGTCCTGGTGCTGCATGAGAAGAACTTTGCGAGGGCTCTGAGTGAGAACAAATACCTGCTTGTGGATTTCTACGCTCCGTGGTGTCGCCACTGTCAGGCCCTTGAGCCAGTTTACGCCGAAGCCGCAGCACAGCTGAAGAACGAATCCTCTCCTGTACGACTGGCCAAGGTCGACGCCACGGAGGAGAAGGAACTCGCTAAAGAGTTTGAGATCAATAACTTTCCAACACTAAAATTGTTTGTGGAAGGCCGCAGACAGAATGCCACAGAGTTTACAGGAAAGCGCAGTGTAAAGGGAATTATACAGTGGCTGCAGCGGCGCACGGGACCGAGCGCTGCTCTTCTAAAGGATGACGAAGCCGCTCAGAAGCTACTCGACGCACACAACGTGGTTGTGGTCGGATTCTTTAAGgACTTGGAAGGAGAGAAAGCCAGAATGTTTAATGATGTTGCGCTGGACATAGTCAACGTTAACTTTGGCATCACAAGCAGTCCAGAGCTCTTCAAGAAGTACAAAGTAGAAAAGGAATCGGTCGTGCTTTTCAAAAAGtttgATGACCGGCGGGCAGACATGCCTCTGTCTGAGGAGGACAAGCTGGACAAGGATGAGCTCATCTCATTCATCCAGAGCAACAGCCTTGAGCTCGTTATTGAATTTAGTGAAGAGAATGGAGAGAAGATTTTTTCTAATAAAGTCCACAACCACCTTCTTCTGTTCATCAACACCACCACTGAGTCGCACACCGCTCTGCTGGACGACTACAGAGCCGTAGCCAGAGACTTTAAAGAGAAAatcCTGTTCATCATGATAGACATCACCACAGATGTTTCGCATGTGCTAAATTATTTCGGTCTGTCTGCGAGTGAAGCTCCGGCGCTCCGTTTCATCAACACCGACACGCTGAAGAAGTTCGCCATGGCAGAAGCAGCCATCAACAAGGACACGCTGAAAACGTTCtgtcaggatgtgctggatgGCAAAGTCAAGCCTCATTTGAAGAGTGAAGACATTCCTGAGGACTGGGATAAGAATCCTGTCAAAGTCCTTGTGGGAAAAAACTTCGAACAGGTCGCCTTTGATGAGACCAAGAACGTCTTTGTGGAATTCTATGCCCCTTGGTGTGGCCACTGTAAGGAACTTGCCCCTGAGTGGGAAAAGCTGGGGGAAAAGTACAAGGACCATGAAAACATCATCATCGCCAAGATGGATTCCACGGCCAATGACGTCGAGGAGGTGACGGTGCAGGGTTATCCCaccctgaaatattttccagCAGGATCCGAGAGGAAGGTGATTGATTATAACGGAAATAGGGATCTGGAAACGTTTGTTAAATTCCTGGATAATGGTGGAGTATTGCCAGAGGAAGAAGACGACGATGacgatgaggatgaagatgaagaccAGGAAAGCAAAGATGAGGTCTCAACAGAATCCATAGAAGAATCAGAGAAACCCTCTAATGGGTCCAGCGGCAAAGACGAGCTCTGAAAACATCCCACACATTAATTAATGCTGATTCAGATCTGAGTGGAGCTACTGAAACTGAATATGCTCAGTACTAGCTGTTTTAAGATTCAGATTCAAGAGTTTGTTGTCATATGCACAGTAAAACAGACAGTTACACTGTtctgataaacacacatttaacacacgTTCCATTCAGTGTCAGTCATCTGACTCGGCACTGAACCTTTCACATGGGAACCAAAATGTTGAGGAAATGCATCAACCATGTAAAATTAATTGTTTGtcataaaatgattaaagaacACCGGCTGGTCTAAAG

Function

NR:

description
PREDICTED: protein disulfide-isomerase-like

GO: NA

KEGG:

id description
K09581 PDIA2; protein disulfide-isomerase A2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026912253.2 True 2021 mRNA 0.47 11 228448 234976

Neighbor

gene id symbol gene type direction distance location
rnf175 rnf175,LOC107665971,LOC107692639,LOC107714147 coding downstream 66467 154481 ~ 161981 (-)
fgb fgb,LOC107758871 coding downstream 98087 125530 ~ 130361 (-)
LOC113524573 lratb,LOC108258974,LOC108439370,LOC107758869,LOC107590749,LOC106608435 coding downstream 114708 92135 ~ 113740 (-)
LOC113524574 LOC108258977 coding downstream 136428 83803 ~ 92020 (-)
lratb.2 LOC108258976 coding downstream 144658 78214 ~ 83790 (-)
rgs11 rgs11 coding upstream 27177 262153 ~ 277683 (-)
elfn1b elfn1b,LOC108258545,LOC108439159,LOC107722936,LOC107590768,LOC107702506,LOC107714143 coding upstream 117477 352453 ~ 408289 (-)
uncx4.1 LOC108258667 coding upstream 283628 518604 ~ 525065 (-)
chtf18 chtf18,LOC107725360 coding upstream 309282 544258 ~ 558212 (-)
plk1 plk1,LOC107722962,LOC107702528 coding upstream 347522 582498 ~ 589396 (-)
G368689 NA non-coding downstream 34534 185834 ~ 193914 (-)
G368685 NA non-coding downstream 43802 179182 ~ 184646 (-)
G368713 NA non-coding upstream 9201 244177 ~ 244780 (-)
G368725 NA non-coding upstream 46463 281439 ~ 281903 (-)
G368903 NA non-coding upstream 343617 578593 ~ 581860 (-)
G368912 NA non-coding upstream 436664 671640 ~ 673030 (-)
G368944 NA non-coding upstream 466108 701084 ~ 701288 (-)
si:dkeyp-75b4.8 NA other downstream 1346 202654 ~ 227102 (-)
pmm2 pmm2,LOC107692644,LOC101469678,LOC102299325,LOC100707130,LOC102200931,LOC107082664 other upstream 49887 284863 ~ 289908 (-)
rasd3 LOC108258668 other upstream 356160 591136 ~ 592595 (-)
prkcba prkcb other upstream 418477 653453 ~ 702345 (-)
zgc:77849 zgc:77849,LOC108258689,LOC103038624,LOC108439082,LOC107722949,LOC107692663,LOC107590708 other upstream 634783 869759 ~ 948803 (-)
G369125 actb other upstream 676577 911553 ~ 915683 (-)

Expression


Co-expression Network