col17a1a (col17a1)


Basic Information

Item Value
gene id col17a1a
gene name col17a1
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047620.1
NCBI id CM018566.1
chromosome length 19313417
location 8640512 ~ 8669319 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026931822.2
CATACTTGTACAGTTGTGCATGAGTCAGAGATAAGCGCTCTGCAGTGAGGTAGCACATACCTGGCCTCTGTGTCACTGGACCTGATCGGAACCACATCGTGAGTATAATACTCGTGTTCGGTACTGACGGTTGACACGCACCAGCACGCGAGAACACAGCGTGAGACATTTCTCCAGTCAGAGGCAACAGTGAACATGGAATGGACAATTTAATCACAACCAAGATTGTGAATGCAGAGGGAGGATCAGTCGTTTCAGGGAAAGttacagagagtgtgaccaccacaaCCAGACTGACATCCCTTCCTCCAAAGGGCAGCAGTAGTTCAGTGAGCACTCAGCGGGTGCTGACATCTACCTCTAGCTCTAGCTCtagttctggttctggttctggagGAACAGTGCTGGTGGAGAGGAGGATCATCACCCAGAGcagcggaggaggaggaggaggaggaggaggtggaggagggagCAGCAGTAATGTCATATCCTTAGGTGGCTCAAGTAGCAGTGCGGTGCAAGTTGTGACTGGTGGCGTGAGCAGTGGCTCATCTGTGACTTCATCTTCTCTGGGAACATCTTCAAGTGGAGCTGCTGGAGGTTTGGGAGCTTCTGGCAAATCCTCCTCCATCATTACAGTTGGAGTTTCTTCAGGAGGAGGCGGGGGTTCTGCAAGCGCTTTCGAGTCCCGCTCATCTTCTCAGCTTGTGTCCAGCTCTTCTGGGGACTTAGGAAGCCTTTCAGTTGGTTCTATGAATCTGTCAGGGGGTGGGGCTCACTCATCAGCCATGTTTTCTGGAGGAGGGGCTTCGTCGACTGTTATATCAGTGGGAGGTGGCTCTACCAAATACACCTCTTCTACGACAAGCGCCACGAAGAGTGCTAGCTACTCACCAGTCACACAGAGGAAAAGCAGCCTGACCCTGCGTACTGCAGGATATGAAGgaagCTCCAGTGGCAACTCCTCCCCTGAATATACTAGGAAAGAGTATGcagcagcagcaagtgcAGCCACCAGAGGACGCACCCAGACAAGAGAGAGTGAGATCAGAGCCAGACTGCAGAGTGCCTCTCCATCCACTAGATggACTGAGCTGGATGATGTGAAGAAACTTCTTAAAGGAAGTCGCTCCAGTAGCAGCAGTCCTCCTCGCTCTCCCACCAATACACTGCCCATACCTAAAAAAGCAAGCGTGGACACACGCGTGGAGAGCcactcagGATATGACAGCTCTATCCTGGAGTCTGCGTATAATGGATATGGCTATCACACCAACCCCAACAACCTCAGCCCCAACTCCACTCTACAACACAACATGGGCCTGCAGAACAACCTGACCTTGAACTCCACAGCCATGGGCAGTGGCCTTTCTGCTGGAAATGCAGtGTATGGGATGCAGAATAACTTGGCAAGCGGTGGGGGAGTGGCAGTCACTGCAAATGGGCTTAGTATTGCTCCAGTATATGGAGTGAGAAAGAACATTGTGAGCACTACAGCTCCCACAACTGCTGCAGCCGCCCCCAGCAGCCCTGTCACCACCGATGATGTGTTTGTTAAGGATTACAAGTTCATGCTGCTGGAGAAAGACAACGTTCCAGTGAAGAAAGAAAGCGAGAGGCTGATTATGTCGAAAGACACGGGCAAAACATTCACTTCCACCGGTGGACTATCAGCCACATTTTCAGATGACTCgctgaaaagagagaaaaagatgatCTCTGGAACCACAGAAACAGTAGTCAGTGGTGTCAAAGTTGCTGCAACAAAGGATAAAGCCACATACGCAGAGATTGGTAAAGATGAATCTGGAGGAGGTGGGATGGGATTCTGCTCCTGCTGTACATGGTGGAAATGGCTGCTTGGATTGCTGTTGGGACTGCTCTTACTGCTGGGTCTTCTCGCTGGACTCATCGCTCTCTCTGAGGAAGTAAAGAGCCTAAAGGCTCGAGTGGAACGTCTGGAAGGCGGCGGGAGCACCATAGGCTCCGCTCACACTAGCCGCCTGTCAGCACCATCCTCTGTGAACATTTTAGATCCAATGGATTCTGTACAATATGAACGCACCCCTATAACACGATCAGAAAACACTATACAACTAGGATCTGTCCAAACGCAGCCTGACCCAGCCACACTGCACAGGACCATAAAACAACTCGTTCACTCTGAACTACAGTCAGAGACCGTCAGAGCTACTCTGGCATCCTCActgaaaggagagagaggggagcCTGGGGCCAAAGgtgaCCAGGGAGCACCTGGGATTAAAGGTGATGCAGGATTTCCTGGAGTGCCAGGTCCTCCTGGTCCTCCTGGTCATCCAGGACAAGAAGGTGCAAGAGGACCTAAAGGAAGTGCTGGTGAGCCAGGACATGATGGCCCTCCTGGACAGAGAGGCCGTGAGGGGCCAACAGGACCCAGAGGAGAACCAGGCCCTCCTGGAGTGggtgagaaaggagagaaagGGGTATCTGGAGAGCCTGGACCTTCTGGACCTGCAGGACCACCTGGACCTATGGGACTCAGAGGTGAAATGGGTGCTCCGGGTACTGTGGGTCTTCCAGGGGCTCCTGGTCCTCAAGGCTTCCGTGGAGATGCTGGTGATCCTGGACCAAAAGGAGAGAGAGGACCTGCAGGGCCTCCTGGAGCTAAAGGTGATCAAGGAGAGAAAGGGCCCCGTGGTGTTACTGGAGAACCAGGGCAGCCAGGACCCATCGGTCCACCAGGAGAGAAAGGACCCAAAGGATCAGCAGGTGCCCCTGGGCCAGATGGTGCAAAGGGAAATCGTGGGGACCAAGGACCAACTGGGTTGCCAGGTCCACGTGGACCAGCTGGACCTCCAGGAGATGCAGGCGTGCCAGGAACTCCAGGGCTTCAAGGACCACCAGGTTTGCCAGGAACACCAGGACAGCCTGGGGCTAAAGgTGAACCAGGTGAACCTGGAAGAGTTATCACTACAGGCTCTGCTTCCAACACTGTGGCTATTCCTGGACCCCCTGGACCTCCTGGACCAGCTGGGCCTGCTGGACCTCCTGGACTGTCAGGTCCCATTGGCCCTGCTGGTCTTCCTGGCCCGGCTGGACCCAAGGGAGGAAAGGGTGACAAGGGTGATGATGGTGAACCTGGCATTTCTGCAAAATCTGTTGAAAGAGTCAAGTTTGAGCCTGTTGCTGGTCTTCCTGGTCCTCCTGGCCCCCCTGGACCACCTGGAGAACCAGGGAAACCTGGTGAAGGCAAAACTGGCCTACCAGGACCCCCAGGTCCACCTGGAGAGCCAGGTATTGGTCTCCCTGGTCCACCTGGTGACAAAGGTGAACCAGGAAGCTTTGTACCCACCTCAGAAACCTTTTTCGCTGGACCCCCTGGGCCTCCTGGACCTCCTGGACCTCAAGGAGAGCCTGGTCATCCTGGACTACCAGGAGAACCTGGAGTTGGTTTTCCAGGGCCTGAAGGCCCAAGTGGACCCCCAGGTCCTGAAGGCTTACCAGGCCCTCAAGGACCACCAGGCCCAGAAGGGCCACCAggtccaaaagGTGATGCTGGTGTCCCAGGGGCCCCTGGCATCCCAGGATATTCTTATGGTGGAGGCAGAAGCTCACCTGGACCACCAGGTCCACCTGGACCTCCAGGGCCTCCTGGACCTCCTGGTGATGCCTCTGGCTCTCCAGACATTTCTCAGCAGCTTAGTGACCTTCTTAGAAATGGTGGCATTAGGGAATACTTCACTGGTCCTCCTGGGCTTCCTGGACCACCTGGAAGTGTATCTGATGATGATTTGGCTAATCGTGTAATCAGTTACATACAAAGAGAGGAGGTGAGGCAGTATCTGGTAGGTCCCCCAGGACCACCCGGACCTCCGGGTATTCCAGGCCTCAACCCTCAGGAAGTAGCTGGAAGAGTCCTCAATCTTATGAATGAGCAGGGTATGCTGACGCAATCTGGACCTCCAGGCCCACCTGGCCCTCCAGGACTTCCTGGAACACCCTACAATGATCTCCCAATTCTCTTACAAAACTCAGAATATAGAAGATTGACTGGGCTACCGGGGCCCCCAGGCCCTCCTGGGTCTCCTGGCATCCCAGGACCTCATGGACCCCCAGGTCTTGTTGCTTTCACAGGCACATTTGGCCTTGAGGATATTCAGAAATACCTAGAGAATGCTGGTTTTAGAGGCCCACCTGGACCCCCGGGTCCTCCGGGACCTCAGGGTCCTCCTGGAATCACAGGGGGCCTGGTGTCATATGCTGAGAATGCACATCAAGAGCCAATCCGTGCTGAACTGCAGGAATATCTAAAGAGTGGCAGGGTGTTCCGTGAAGAGCCAAGCCATAGCTTTGCAGAGAGCAAACATTTGCCTGTTGAGACTTTGGACTACCCCAGTATTGCAGAACAAGTGGTGAACTACATCAAATCTCATGGTTTGTTGTTGTGGGATCTCAAAGATATTCAAGGGCCGCCAGGTCCTCCTGGACCTCCTGGACGTCCTGGAATCAGCCATTCATACAGTACTTATGGCAACATGACTGAGATACTTAAAATTATTAGAGaccatggcatggttggaCCACCAGGAAGACCTGGGCAGAAGGGAGAAATAGGATATCCTGGTCCCAGAGGACCAAGAGGTCCTAGAGGTGAGCAAGGCATCCCTGGTCTGCCAGGACTTCCTGGTAATGATGGACTAAGAggacaaaaaggagaaaaaggagaAGCTGCCTACATAAATCACAGAAGAAAGAGAAGTACAGGTGTTTAGACTGACAcagaaaatgattaattattttccataaatttaataatttctgtAGCTTTTTTGTTTGCAACTTTTTGTAAGAGCCAAACCATGGGATAGGTAAAGccataaacacactacactcgcagaaatgcagaaatgaaaatacagtGACTCGCTGACAGTCAAGATGTCAAATTTCTTGACATGACAAAATGTATGtacataattcatttgttttataatcCAAATATAGAAATATCGTAGAAGGAATTAGGTTCAAATGTAGTGTTTCATCAATTCTTAATCAAATTTACTTTTTTCTACTATGAATTTTTGAAGAACAATTTTTTAACTacaacattttaacatgttttgTTTGATTATTCAGAACTCTTCATCTTTTTCTAGTTTTGCATAGAAAAgctcttttcatatttttagttTGGGATTTTCCATGTATTGTGAAAagatttatactttttttttaaacatcatttactTCATTTACTAATTATGTTAATGAATTACAGAGTAAATATCATAACAGAACATATTTCATAACTATGTCTCGTGGAGGGCATCGAGTTTTTTACTGTAACTGATGTCAATACTAACACCAGAATGGGGCAGTTGCAGCTCAGCAGTAAAGGCTCTGTACTAGTGCCCAGAAGTTTATGAGTTCAGATCCCAAAACTACCAGAGAGCCACTGTTGTGTCCTTAAGCAAGGCCTTTACTCCTTAAAAGCTCTGTTTTATGCTTGGAAAGTGACTTCGGAAGAAAGTATCTACTGAATGAGTACACGGAAATGGTTTTCTatatgaaagtgaaaaataaagtctttttta
>XM_026931823.2
CATACTTGTACAGTTGTGCATGAGTCAGAGATAAGCGCTCTGCAGTGAGGTAGCACATACCTGGCCTCTGTGTCACTGGACCTGATCGGAACCACATCGTGAGTATAATACTCGTGTTCGGTACTGACGGTTGACACGCACCAGCACGCGAGAACACAGCGTGAGACATTTCTCCAGTCAGAGGCAACAGTGAACATGGAATGGACAATTTAATCACAACCAAGATTGTGAATGCAGAGGGAGGATCAGTCGTTTCAGGGAAAGttacagagagtgtgaccaccacaaCCAGACTGACATCCCTTCCTCCAAAGGGCAGCAGTAGTTCAGTGAGCACTCAGCGGGTGCTGACATCTACCTCTAGCTCTAGCTCtagttctggttctggttctggagGAACAGTGCTGGTGGAGAGGAGGATCATCACCCAGAGcagcggaggaggaggaggaggaggaggaggtggaggagggagCAGCAGTAATGTCATATCCTTAGGTGGCTCAAGTAGCAGTGCGGTGCAAGTTGTGACTGGTGGCGTGAGCAGTGGCTCATCTGTGACTTCATCTTCTCTGGGAACATCTTCAAGTGGAGCTGCTGGAGGTTTGGGAGCTTCTGGCAAATCCTCCTCCATCATTACAGTTGGAGTTTCTTCAGGAGGAGGCGGGGGTTCTGCAAGCGCTTTCGAGTCCCGCTCATCTTCTCAGCTTGTGTCCAGCTCTTCTGGGGACTTAGGAAGCCTTTCAGTTGGTTCTATGAATCTGTCAGGGGGTGGGGCTCACTCATCAGCCATGTTTTCTGGAGGAGGGGCTTCGTCGACTGTTATATCAGTGGGAGGTGGCTCTACCAAATACACCTCTTCTACGACAAGCGCCACGAAGAGTGCTAGCTACTCACCAGTCACACAGAGGAAAAGCAGCCTGACCCTGCGTACTGCAGGATATGAAGgaagCTCCAGTGGCAACTCCTCCCCTGAATATACTAGGAAAGAGTATGcagcagcaagtgcAGCCACCAGAGGACGCACCCAGACAAGAGAGAGTGAGATCAGAGCCAGACTGCAGAGTGCCTCTCCATCCACTAGATggACTGAGCTGGATGATGTGAAGAAACTTCTTAAAGGAAGTCGCTCCAGTAGCAGCAGTCCTCCTCGCTCTCCCACCAATACACTGCCCATACCTAAAAAAGCAAGCGTGGACACACGCGTGGAGAGCcactcagGATATGACAGCTCTATCCTGGAGTCTGCGTATAATGGATATGGCTATCACACCAACCCCAACAACCTCAGCCCCAACTCCACTCTACAACACAACATGGGCCTGCAGAACAACCTGACCTTGAACTCCACAGCCATGGGCAGTGGCCTTTCTGCTGGAAATGCAGtGTATGGGATGCAGAATAACTTGGCAAGCGGTGGGGGAGTGGCAGTCACTGCAAATGGGCTTAGTATTGCTCCAGTATATGGAGTGAGAAAGAACATTGTGAGCACTACAGCTCCCACAACTGCTGCAGCCGCCCCCAGCAGCCCTGTCACCACCGATGATGTGTTTGTTAAGGATTACAAGTTCATGCTGCTGGAGAAAGACAACGTTCCAGTGAAGAAAGAAAGCGAGAGGCTGATTATGTCGAAAGACACGGGCAAAACATTCACTTCCACCGGTGGACTATCAGCCACATTTTCAGATGACTCgctgaaaagagagaaaaagatgatCTCTGGAACCACAGAAACAGTAGTCAGTGGTGTCAAAGTTGCTGCAACAAAGGATAAAGCCACATACGCAGAGATTGGTAAAGATGAATCTGGAGGAGGTGGGATGGGATTCTGCTCCTGCTGTACATGGTGGAAATGGCTGCTTGGATTGCTGTTGGGACTGCTCTTACTGCTGGGTCTTCTCGCTGGACTCATCGCTCTCTCTGAGGAAGTAAAGAGCCTAAAGGCTCGAGTGGAACGTCTGGAAGGCGGCGGGAGCACCATAGGCTCCGCTCACACTAGCCGCCTGTCAGCACCATCCTCTGTGAACATTTTAGATCCAATGGATTCTGTACAATATGAACGCACCCCTATAACACGATCAGAAAACACTATACAACTAGGATCTGTCCAAACGCAGCCTGACCCAGCCACACTGCACAGGACCATAAAACAACTCGTTCACTCTGAACTACAGTCAGAGACCGTCAGAGCTACTCTGGCATCCTCActgaaaggagagagaggggagcCTGGGGCCAAAGgtgaCCAGGGAGCACCTGGGATTAAAGGTGATGCAGGATTTCCTGGAGTGCCAGGTCCTCCTGGTCCTCCTGGTCATCCAGGACAAGAAGGTGCAAGAGGACCTAAAGGAAGTGCTGGTGAGCCAGGACATGATGGCCCTCCTGGACAGAGAGGCCGTGAGGGGCCAACAGGACCCAGAGGAGAACCAGGCCCTCCTGGAGTGggtgagaaaggagagaaagGGGTATCTGGAGAGCCTGGACCTTCTGGACCTGCAGGACCACCTGGACCTATGGGACTCAGAGGTGAAATGGGTGCTCCGGGTACTGTGGGTCTTCCAGGGGCTCCTGGTCCTCAAGGCTTCCGTGGAGATGCTGGTGATCCTGGACCAAAAGGAGAGAGAGGACCTGCAGGGCCTCCTGGAGCTAAAGGTGATCAAGGAGAGAAAGGGCCCCGTGGTGTTACTGGAGAACCAGGGCAGCCAGGACCCATCGGTCCACCAGGAGAGAAAGGACCCAAAGGATCAGCAGGTGCCCCTGGGCCAGATGGTGCAAAGGGAAATCGTGGGGACCAAGGACCAACTGGGTTGCCAGGTCCACGTGGACCAGCTGGACCTCCAGGAGATGCAGGCGTGCCAGGAACTCCAGGGCTTCAAGGACCACCAGGTTTGCCAGGAACACCAGGACAGCCTGGGGCTAAAGgTGAACCAGGTGAACCTGGAAGAGTTATCACTACAGGCTCTGCTTCCAACACTGTGGCTATTCCTGGACCCCCTGGACCTCCTGGACCAGCTGGGCCTGCTGGACCTCCTGGACTGTCAGGTCCCATTGGCCCTGCTGGTCTTCCTGGCCCGGCTGGACCCAAGGGAGGAAAGGGTGACAAGGGTGATGATGGTGAACCTGGCATTTCTGCAAAATCTGTTGAAAGAGTCAAGTTTGAGCCTGTTGCTGGTCTTCCTGGTCCTCCTGGCCCCCCTGGACCACCTGGAGAACCAGGGAAACCTGGTGAAGGCAAAACTGGCCTACCAGGACCCCCAGGTCCACCTGGAGAGCCAGGTATTGGTCTCCCTGGTCCACCTGGTGACAAAGGTGAACCAGGAAGCTTTGTACCCACCTCAGAAACCTTTTTCGCTGGACCCCCTGGGCCTCCTGGACCTCCTGGACCTCAAGGAGAGCCTGGTCATCCTGGACTACCAGGAGAACCTGGAGTTGGTTTTCCAGGGCCTGAAGGCCCAAGTGGACCCCCAGGTCCTGAAGGCTTACCAGGCCCTCAAGGACCACCAGGCCCAGAAGGGCCACCAggtccaaaagGTGATGCTGGTGTCCCAGGGGCCCCTGGCATCCCAGGATATTCTTATGGTGGAGGCAGAAGCTCACCTGGACCACCAGGTCCACCTGGACCTCCAGGGCCTCCTGGACCTCCTGGTGATGCCTCTGGCTCTCCAGACATTTCTCAGCAGCTTAGTGACCTTCTTAGAAATGGTGGCATTAGGGAATACTTCACTGGTCCTCCTGGGCTTCCTGGACCACCTGGAAGTGTATCTGATGATGATTTGGCTAATCGTGTAATCAGTTACATACAAAGAGAGGAGGTGAGGCAGTATCTGGTAGGTCCCCCAGGACCACCCGGACCTCCGGGTATTCCAGGCCTCAACCCTCAGGAAGTAGCTGGAAGAGTCCTCAATCTTATGAATGAGCAGGGTATGCTGACGCAATCTGGACCTCCAGGCCCACCTGGCCCTCCAGGACTTCCTGGAACACCCTACAATGATCTCCCAATTCTCTTACAAAACTCAGAATATAGAAGATTGACTGGGCTACCGGGGCCCCCAGGCCCTCCTGGGTCTCCTGGCATCCCAGGACCTCATGGACCCCCAGGTCTTGTTGCTTTCACAGGCACATTTGGCCTTGAGGATATTCAGAAATACCTAGAGAATGCTGGTTTTAGAGGCCCACCTGGACCCCCGGGTCCTCCGGGACCTCAGGGTCCTCCTGGAATCACAGGGGGCCTGGTGTCATATGCTGAGAATGCACATCAAGAGCCAATCCGTGCTGAACTGCAGGAATATCTAAAGAGTGGCAGGGTGTTCCGTGAAGAGCCAAGCCATAGCTTTGCAGAGAGCAAACATTTGCCTGTTGAGACTTTGGACTACCCCAGTATTGCAGAACAAGTGGTGAACTACATCAAATCTCATGGTTTGTTGTTGTGGGATCTCAAAGATATTCAAGGGCCGCCAGGTCCTCCTGGACCTCCTGGACGTCCTGGAATCAGCCATTCATACAGTACTTATGGCAACATGACTGAGATACTTAAAATTATTAGAGaccatggcatggttggaCCACCAGGAAGACCTGGGCAGAAGGGAGAAATAGGATATCCTGGTCCCAGAGGACCAAGAGGTCCTAGAGGTGAGCAAGGCATCCCTGGTCTGCCAGGACTTCCTGGTAATGATGGACTAAGAggacaaaaaggagaaaaaggagaAGCTGCCTACATAAATCACAGAAGAAAGAGAAGTACAGGTGTTTAGACTGACAcagaaaatgattaattattttccataaatttaataatttctgtAGCTTTTTTGTTTGCAACTTTTTGTAAGAGCCAAACCATGGGATAGGTAAAGccataaacacactacactcgcagaaatgcagaaatgaaaatacagtGACTCGCTGACAGTCAAGATGTCAAATTTCTTGACATGACAAAATGTATGtacataattcatttgttttataatcCAAATATAGAAATATCGTAGAAGGAATTAGGTTCAAATGTAGTGTTTCATCAATTCTTAATCAAATTTACTTTTTTCTACTATGAATTTTTGAAGAACAATTTTTTAACTacaacattttaacatgttttgTTTGATTATTCAGAACTCTTCATCTTTTTCTAGTTTTGCATAGAAAAgctcttttcatatttttagttTGGGATTTTCCATGTATTGTGAAAagatttatactttttttttaaacatcatttactTCATTTACTAATTATGTTAATGAATTACAGAGTAAATATCATAACAGAACATATTTCATAACTATGTCTCGTGGAGGGCATCGAGTTTTTTACTGTAACTGATGTCAATACTAACACCAGAATGGGGCAGTTGCAGCTCAGCAGTAAAGGCTCTGTACTAGTGCCCAGAAGTTTATGAGTTCAGATCCCAAAACTACCAGAGAGCCACTGTTGTGTCCTTAAGCAAGGCCTTTACTCCTTAAAAGCTCTGTTTTATGCTTGGAAAGTGACTTCGGAAGAAAGTATCTACTGAATGAGTACACGGAAATGGTTTTCTatatgaaagtgaaaaataaagtctttttta
>XM_026931824.2
CATACTTGTACAGTTGTGCATGAGTCAGAGATAAGCGCTCTGCAGTGAGGTAGCACATACCTGGCCTCTGTGTCACTGGACCTGATCGGAACCACATCGTGAGTATAATACTCGTGTTCGGTACTGACGGTTGACACGCACCAGCACGCGAGAACACAGCGTGAGACATTTCTCCAGTCAGAGGCAACAGTGAACATGGAATGGACAATTTAATCACAACCAAGATTGTGAATGCAGAGGGAGGATCAGTCGTTTCAGGGAAAGttacagagagtgtgaccaccacaaCCAGACTGACATCCCTTCCTCCAAAGGGCAGCAGTAGTTCAGTGAGCACTCAGCGGGTGCTGACATCTACCTCTAGCTCTAGCTCtagttctggttctggttctggagGAACAGTGCTGGTGGAGAGGAGGATCATCACCCAGAGcagcggaggaggaggaggaggaggaggaggtggaggagggagCAGCAGTAATGTCATATCCTTAGGTGGCTCAAGTAGCAGTGCGGTGCAAGTTGTGACTGGTGGCGTGAGCAGTGGCTCATCTGTGACTTCATCTTCTCTGGGAACATCTTCAAGTGGAGCTGCTGGAGGTTTGGGAGCTTCTGGCAAATCCTCCTCCATCATTACAGTTGGAGTTTCTTCAGGAGGAGGCGGGGGTTCTGCAAGCGCTTTCGAGTCCCGCTCATCTTCTCAGCTTGTGTCCAGCTCTTCTGGGGACTTAGGAAGCCTTTCAGTTGGTTCTATGAATCTGTCAGGGGGTGGGGCTCACTCATCAGCCATGTTTTCTGGAGGAGGGGCTTCGTCGACTGTTATATCAGTGGGAGGTGGCTCTACCAAATACACCTCTTCTACGACAAGCGCCACGAAGAGTGCTAGCTACTCACCAGTCACACAGAGGAAAAGCAGCCTGACCCTGCGTACTGCAGGATATGAAGgaagCTCCAGTGGCAACTCCTCCCCTGAATATACTAGGAAAGAGTATGcagcagcagcaagtgcAGCCACCAGAGGACGCACCCAGACAAGAGAGAGTGAGATCAGAGCCAGACTGCAGAGTGCCTCTCCATCCACTAGATggACTGAGCTGGATGATGTGAAGAAACTTCTTAAAGGAAGTCGCTCCAGTAGCAGCAGTCCTCCTCGCTCTCCCACCAATACACTGCCCATACCTAAAAAAGCAAGCGTGGACACACGCGTGGAGAGCcactcagGATATGACAGCTCTATCCTGGAGTCTGCGTATAATGGATATGGCTATCACACCAACCCCAACAACCTCAGCCCCAACTCCACTCTACAACACAACATGGGCCTGCAGAACAACCTGACCTTGAACTCCACAGCCATGGGCAGTGGCCTTTCTGCTGGAAATGCAGtGTATGGGATGCAGAATAACTTGGCAAGCGGTGGGGGAGTGGCAGTCACTGCAAATGGGCTTAGTATTGCTCCAGTATATGGAGTGAGAAAGAACATTGTGAGCACTACAGCTCCCACAACTGCTGCAGCCGCCCCCAGCAGCCCTGTCACCACCGATGATGTGTTTGTTAAGGATTACAAGTTCATGCTGCTGGAGAAAGACAACGTTCCAGTGAAGAAAGAAAGCGAGAGGCTGATTATGTCGAAAGACACGGGCAAAACATTCACTTCCACCGGTGGACTATCAGCCACATTTTCAGATGACTCgctgaaaagagagaaaaagatgatCTCTGGAACCACAGAAACAGTAGTCAGTGGTGTCAAAGTTGCTGCAACAAAGGATAAAGCCACATACGCAGAGATTGGTAAAGATGAATCTGGAGGAGGTGGGATGGGATTCTGCTCCTGCTGTACATGGTGGAAATGGCTGCTTGGATTGCTGTTGGGACTGCTCTTACTGCTGGGTCTTCTCGCTGGACTCATCGCTCTCTCTGAGGAAGTAAAGAGCCTAAAGGCTCGAGTGGAACGTCTGGAAGGCGGCGGGAGCACCATAGGCTCCGCTCACACTAGCCGCCTGTCAGCACCATCCTCTGTGAACATTTTAGATCCAATGGATTCTGTACAATATGAACGCACCCCTATAACACGATCAGAAAACACTATACAACTAGGATCTGTCCAAACGCAGCCTGACCCAGCCACACTGCACAGGACCATAAAACAACTCGTTCACTCTGAACTACAGTCAGAGACCGTCAGAGCTACTCTGGCATCCTCActgaaaggagagagaggggagcCTGGGGCCAAAGgtgaCCAGGGAGCACCTGGGATTAAAGGTGATGCAGGATTTCCTGGAGTGCCAGGTCCTCCTGGTCCTCCTGGTCATCCAGGACAAGAAGGTGCAAGAGGACCTAAAGGAAGTGCTGGTGAGCCAGGACATGATGGCCCTCCTGGACAGAGAGGCCGTGAGGGGCCAACAGGACCCAGAGGAGAACCAGGCCCTCCTGGAGTGggtgagaaaggagagaaagGGGTATCTGGAGAGCCTGGACCTTCTGGACCTGCAGGACCACCTGGACCTATGGGACTCAGAGGTGAAATGGGTGCTCCGGGTACTGTGGGTCTTCCAGGGGCTCCTGGTCCTCAAGGCTTCCGTGGAGATGCTGGTGATCCTGGACCAAAAGGAGAGAGAGGACCTGCAGGGCCTCCTGGAGCTAAAGGTGATCAAGGAGAGAAAGGGCCCCGTGGTGTTACTGGAGAACCAGGGCAGCCAGGACCCATCGGTCCACCAGGAGAGAAAGGACCCAAAGGATCAGCAGGTGCCCCTGGGCCAGATGGTGCAAAGGGAAATCGTGGGGACCAAGGACCAACTGGGTTGCCAGGTCCACGTGGACCAGCTGGACCTCCAGGAGATGCAGGCGTGCCAGGAACTCCAGGGCTTCAAGGACCACCAGGTTTGCCAGGAACACCAGGACAGCCTGGGGCTAAAGgTGAACCAGGTGAACCTGGAAGAGTTATCACTACAGGCTCTGCTTCCAACACTGTGGCTATTCCTGGACCCCCTGGACCTCCTGGACCAGCTGGGCCTGCTGGACCTCCTGGACTGTCAGGTCCCATTGGCCCTGCTGGTCTTCCTGGCCCGGCTGGACCCAAGGGAGGAAAGGGTGACAAGGGTGATGATGGTGAACCTGGCATTTCTGCAAAATCTGTTGAAAGAGTCAAGTTTGAGCCTGTTGCTGGTCTTCCTGGTCCTCCTGGCCCCCCTGGACCACCTGGAGAACCAGGGAAACCTGGTGAAGGCAAAACTGGCCTACCAGGACCCCCAGGTCCACCTGGAGAGCCAGGTATTGGTCTCCCTGGTCCACCTGGTGACAAAGGTGAACCAGGAAGCTTTGTACCCACCTCAGAAACCTTTTTCGCTGGACCCCCTGGGCCTCCTGGACCTCCTGGACCTCAAGGAGAGCCTGGTCATCCTGGACTACCAGGAGAACCTGGAGTTGGTTTTCCAGGGCCTGAAGGCCCAAGTGGACCCCCAGGTCCTGAAGGCTTACCAGGCCCTCAAGGACCACCAGGCCCAGAAGGGCCACCAggtccaaaagGTGATGCTGGTGTCCCAGGGGCCCCTGGCATCCCAGGATATTCTTATGGTGGAGGCAGAAGCTCACCTGGACCACCAGGTCCACCTGGACCTCCAGGGCCTCCTGGACCTCCTGGTGATGCCTCTGGCTCTCCAGACATTTCTCAGCAGCTTAGTGACCTTCTTAGAAATGGTGGCATTAGGGAATACTTCACTGGTCCTCCTGGGCTTCCTGGACCACCTGGAAGTGTATCTGATGATGATTTGGCTAATCGTGTAATCAGTTACATACAAAGAGAGGAGGTGAGGCAGTATCTGGTAGGTCCCCCAGGACCACCCGGACCTCCGGGTATTCCAGGCCTCAACCCTCAGGAAGTAGCTGGAAGAGTCCTCAATCTTATGAATGAGCAGGGTATGCTGACGCAATCTGGACCTCCAGGCCCACCTGGCCCTCCAGGACTTCCTGGAACACCCTACAATGATCTCCCAATTCTCTTACAAAATGCTGGTTTTAGAGGCCCACCTGGACCCCCGGGTCCTCCGGGACCTCAGGGTCCTCCTGGAATCACAGGGGGCCTGGTGTCATATGCTGAGAATGCACATCAAGAGCCAATCCGTGCTGAACTGCAGGAATATCTAAAGAGTGGCAGGGTGTTCCGTGAAGAGCCAAGCCATAGCTTTGCAGAGAGCAAACATTTGCCTGTTGAGACTTTGGACTACCCCAGTATTGCAGAACAAGTGGTGAACTACATCAAATCTCATGGTTTGTTGTTGTGGGATCTCAAAGATATTCAAGGGCCGCCAGGTCCTCCTGGACCTCCTGGACGTCCTGGAATCAGCCATTCATACAGTACTTATGGCAACATGACTGAGATACTTAAAATTATTAGAGaccatggcatggttggaCCACCAGGAAGACCTGGGCAGAAGGGAGAAATAGGATATCCTGGTCCCAGAGGACCAAGAGGTCCTAGAGGTGAGCAAGGCATCCCTGGTCTGCCAGGACTTCCTGGTAATGATGGACTAAGAggacaaaaaggagaaaaaggagaAGCTGCCTACATAAATCACAGAAGAAAGAGAAGTACAGGTGTTTAGACTGACAcagaaaatgattaattattttccataaatttaataatttctgtAGCTTTTTTGTTTGCAACTTTTTGTAAGAGCCAAACCATGGGATAGGTAAAGccataaacacactacactcgcagaaatgcagaaatgaaaatacagtGACTCGCTGACAGTCAAGATGTCAAATTTCTTGACATGACAAAATGTATGtacataattcatttgttttataatcCAAATATAGAAATATCGTAGAAGGAATTAGGTTCAAATGTAGTGTTTCATCAATTCTTAATCAAATTTACTTTTTTCTACTATGAATTTTTGAAGAACAATTTTTTAACTacaacattttaacatgttttgTTTGATTATTCAGAACTCTTCATCTTTTTCTAGTTTTGCATAGAAAAgctcttttcatatttttagttTGGGATTTTCCATGTATTGTGAAAagatttatactttttttttaaacatcatttactTCATTTACTAATTATGTTAATGAATTACAGAGTAAATATCATAACAGAACATATTTCATAACTATGTCTCGTGGAGGGCATCGAGTTTTTTACTGTAACTGATGTCAATACTAACACCAGAATGGGGCAGTTGCAGCTCAGCAGTAAAGGCTCTGTACTAGTGCCCAGAAGTTTATGAGTTCAGATCCCAAAACTACCAGAGAGCCACTGTTGTGTCCTTAAGCAAGGCCTTTACTCCTTAAAAGCTCTGTTTTATGCTTGGAAAGTGACTTCGGAAGAAAGTATCTACTGAATGAGTACACGGAAATGGTTTTCTatatgaaagtgaaaaataaagtctttttta

Function

symbol description
col17a1 An extracellular matrix structural constituent conferring tensile strength. Involved in hemidesmosome assembly. Located in hemidesmosome. Implicated in epithelial recurrent erosion dystrophy; junctional epidermolysis bullosa; and junctional epidermolysis bullosa non-Herlitz type.

NR:

description
collagen alpha-1(XVII) chain-like isoform X2

GO:

id name namespace
GO:0008544 epidermis development biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026931822.2 True 5582 mRNA 0.50 54 8640512 8669319
XM_026931823.2 False 5579 mRNA 0.50 54 8640512 8669319
XM_026931824.2 False 5438 mRNA 0.50 53 8640512 8669319

Neighbor

gene id symbol gene type direction distance location
cracdlb LOC108259003 coding downstream 50094 8572271 ~ 8590418 (-)
LOC113537579 NA coding downstream 71477 8556011 ~ 8569035 (-)
LOC113537664 zc3h12c,LOC108259022 coding downstream 86204 8529482 ~ 8554308 (-)
LOC113537751 vangl1,LOC107588836,LOC107552384,LOC107739810 coding downstream 224571 8355647 ~ 8415941 (-)
poglut1 poglut1 coding downstream 303644 8329650 ~ 8336868 (-)
LOC113537765 NA coding upstream 25218 8694537 ~ 8697313 (-)
pdcd11 pdcd11,LOC104950700 coding upstream 41064 8710383 ~ 8740417 (-)
taf5 taf5,LOC107583167,LOC107684290,LOC107676012 coding upstream 74133 8743452 ~ 8752250 (-)
msx1b LOC108258334 coding upstream 127048 8796367 ~ 8798248 (-)
caly caly,LOC108258305,LOC108434710,LOC103039857,LOC105891014 coding upstream 166168 8835487 ~ 8848164 (-)
G372522 NA non-coding downstream 196447 8428604 ~ 8444065 (-)
G372471 NA non-coding downstream 436288 8202768 ~ 8204224 (-)
G372307 NA non-coding downstream 624124 8016105 ~ 8016388 (-)
G372300 NA non-coding downstream 651314 7988950 ~ 7989198 (-)
G372288 NA non-coding downstream 663521 7976777 ~ 7976991 (-)
G372742 NA non-coding upstream 105713 8775032 ~ 8788141 (-)
LOC113537261 NA non-coding upstream 294266 8963585 ~ 8965621 (-)
G373288 NA non-coding upstream 1090422 9759741 ~ 9759949 (-)
G373292 neurl1,LOC107676877,LOC107746052 non-coding upstream 1094300 9763619 ~ 9764526 (-)
G373296 neurl1,LOC103384027 non-coding upstream 1097720 9767039 ~ 9767482 (-)
tsga10 LOC108258346 other downstream 29671 8591407 ~ 8610841 (-)
LOC113537606 nhlh2,LOC108258389,LOC103035065,LOC108434665,LOC107739819,LOC105019883 other downstream 208074 8429562 ~ 8432438 (-)
timmdc1 timmdc1 other downstream 311486 8320868 ~ 8329026 (-)
LOC113537489 NA other downstream 373240 8261435 ~ 8267272 (-)
cars2 cars2 other downstream 555973 8069402 ~ 8084539 (-)
LOC117596103 LOC102201964,LOC102304430 other upstream 1209524 9878843 ~ 9918779 (-)
cab39l cab39l,LOC107676861,LOC107718429 other upstream 1752833 10422152 ~ 10435367 (-)
lipt1 lipt1 other upstream 2201905 10871224 ~ 10872556 (-)
mzt1 mzt1,si:dkey-15d12.2,LOC107556706 other upstream 3409572 12078891 ~ 12084049 (-)
LOC113537246 NA other upstream 3955732 12625051 ~ 12630403 (-)

Expression


Co-expression Network