hikeshi (hikeshi,ck073)



Basic Information


Item Value
gene id hikeshi
gene name hikeshi,ck073
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_047620.1
NCBI id CM018566.1
chromosome length 19313417
location 6660785 ~ 6666073 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence


>XM_026932035.2
CGGAGGTTGGAGCAGTTGTCTCAGCTTCTCAGCTGCTGGTTGAGGACTGCCTACTTTTCGAAGTTtctagcagcagcagcaggaaaaTCATCTGCAGTCTGATGGGCTCTTTGCTTGTGGCCTCATCAGGGCGCTTGTAATGTTTGTGTGCTCGCGGACGCACGAGCGCTCATGAAGCCATGATCAGAGGTTCAGGAGGTTTTTTATGTGTTTCTTGGTTGGAAAagaattctttaataaactaGCACTACACTGGCTGACAGCTGATCATGTTTGGGTGTCTAGTTGCAGGCAGATTGGTCCAGACCGACGCCCAGCAGGTGGCTGGTGATAAATTTGTGTTCAACCTGCCGGACTATGAGAATGTGAACCATGTGGTGGTGTTCATGCTGGGCACAGTGCCTTTCCCTGCTGGCATGGGAGGTGCTGTTTACTTCTCCTTCCCCGACCCCAGTGTGGGCCAGGTGTGGCAGCTGCTGGGCTTCATCACCAACGAAAAGCCAAGTGCCATCTTTAAAATCTCGGGCCTAAAAGCTGGTGAAGGTGGAAGTCATCCGTTCGGGATGATGGCTGCTCCACAGGCCGCCTCAGTGGCTCAGGTCGGCGTTTCCGTTGAACCCCTCGACCAGCTCGCTCAACAGACACCGGTTTCCAATGCAACCGTCTCCACCATGGATTCCTTCACACAGTTCACCCAGAAGATGTTGGAGAGTCTGTACAACTTCACCTCCTCCTTCGCTCTGTCACAAGCTCAGATGACACCAAACCCCTCGGAAATGTATGTTCCAGCCAGCTCCATCCTTAAATGGTATGAGAACTTCCAGAGACGAATGGTGCAGAATCCAAACTTCTGGAAGACATGACATGCTTTATTGACTAAGCTCTTAATTAACACAGGAGCAGAAAATTGTGAATTCATATTATCATTTGGCTTGCCTTGGATGTAAGAATTTCATGCCAACATCAGTAAATCTTATGTATTTTATAGCTCTTATGGAACAGCAGACAAGTAAATACAGtattacagtacagttttaATGCAGTGGACACTGGCTGGTTGTTTTGGGGTTTGCCAGCTGAGGATAAGTTACAGAATTTTCATATTGAATGATTGATATTTGTAATGTGGCTATAAAAATGCAGTCTTTCACATGTCTACCTTCTGTGTAATCTGGTGttctaggttaaaaaaaaataatttttttttaattgcttcatAAGCTGTGATAAAGCTTAGAAAAGAATCAATTTTTGGGTGAAGAAGAAATTGGATAATAACAGCTTTTGTTTATCTGATTAATGACCTTTAATAGTGaagtaatgaaaatgaatgaacgatTTTCTTTTCGAGTCAgtctttttaatcatttgttaaTGTAGCCAA

Function


symbol description
hikeshi Predicted to enable Hsp70 protein binding activity and nuclear import signal receptor activity. Predicted to be involved in cellular response to heat and protein import into nucleus. Predicted to act upstream of or within protein transport. Predicted to be located in cytoplasm. Predicted to be active in cytosol and nucleus. Human ortholog(s) of this gene implicated in hypomyelinating leukodystrophy 13. Orthologous to human HIKESHI (heat shock protein nuclear import factor hikeshi).

NR:

description
PREDICTED: protein Hikeshi

GO: NA

KEGG:

id description
K23327 HIKESHI; protein Hikeshi

RNA


RNA id representative length rna type GC content exon number start site end site
XM_026932035.2 True 1384 mRNA 0.44 5 6660785 6666073

Neighbor


gene id symbol gene type direction distance location
LOC113537292 ccdc81 coding downstream 698 6641064 ~ 6660087 (-)
LOC113537384 prss23,LOC107570079,LOC106575973 coding downstream 49878 6606600 ~ 6610907 (-)
LOC113537739 LOC108258596 coding downstream 160172 6468517 ~ 6500613 (-)
dusp27 dusp27,LOC102309085 coding downstream 199234 6451575 ~ 6461551 (-)
LOC113537523 pou2f1 coding downstream 210866 6432009 ~ 6449919 (-)
eed eed coding upstream 2150 6668223 ~ 6675921 (-)
nfkbiz nfkbiz coding upstream 25591 6691664 ~ 6699031 (-)
cep97 cep97 coding upstream 37361 6703434 ~ 6714568 (-)
LOC113537618 LOC108258862,LOC108258860,LOC108258861,LOC108258859,LOC108429797,LOC108261765 coding upstream 55255 6721328 ~ 6733356 (-)
LOC113537509 LOC108258862,LOC108258860,LOC108258861,LOC108258859,LOC108429797,LOC108261765,LOC108258858,LOC108434714 coding upstream 76514 6742587 ~ 6770718 (-)
G371487 NA non-coding downstream 93840 6563849 ~ 6566945 (-)
G371454 NA non-coding downstream 124781 6529397 ~ 6536004 (-)
G371134 mettl21c,LOC108429839 non-coding downstream 655995 6001838 ~ 6004790 (-)
G371135 NA non-coding downstream 659172 6001179 ~ 6001613 (-)
G371153 NA non-coding downstream 661311 5998848 ~ 5999474 (-)
G371595 NA non-coding upstream 142420 6808493 ~ 6815071 (-)
G371632 NA non-coding upstream 201671 6867744 ~ 6867960 (-)
G371625 NA non-coding upstream 213797 6879870 ~ 6881780 (-)
G371634 NA non-coding upstream 225693 6891766 ~ 6901343 (-)
G371787 NA non-coding upstream 485365 7151438 ~ 7153159 (-)
LOC113537742 LOC108258591 other downstream 297582 6358639 ~ 6363203 (-)
tpp2 tpp2,si:ch73-244f7.4,LOC107665822 other downstream 627392 6015726 ~ 6033393 (-)
LOC113537623 NA other downstream 708472 5942039 ~ 5952313 (-)
LOC113537235 son,LOC107698912,LOC107709257,LOC107698212,LOC107571887,LOC107555269,LOC565999 other downstream 1113753 5529992 ~ 5547032 (-)
LOC113537294 NA other downstream 1265773 5388904 ~ 5395012 (-)
pspc1 pspc1,LOC108258933,LOC108434730 other upstream 204493 6870566 ~ 6910546 (-)
LOC113537271 LOC108258282 other upstream 392762 7058835 ~ 7068531 (-)
LOC113537388 arhgap6 other upstream 691198 7357271 ~ 7478509 (-)
G372086 LOC108258915 other upstream 1052190 7718263 ~ 7724795 (-)
fam155a LOC108258331 other upstream 1246137 7912210 ~ 7993096 (-)

Expression



Co-expression Network