nfkbiz (nfkbiz)


Basic Information

Item Value
gene id nfkbiz
gene name nfkbiz
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047620.1
NCBI id CM018566.1
chromosome length 19313417
location 6691664 ~ 6699031 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026932045.2
CTCAGGTCCgccatttgggacagggccgTTGGTCTTAGCCCAGGGACTTTCTGCTCCGCCATTGGCTCTCAGCTcagagggggcggggcttggcCACCTAGCCAGCCTGACAAAAGCACCGCGGTCCATTTCTCCATCAGAGTTACTGGAGCTGTTGAGTAATAACACACAGAAAGAGGAAGCGAGACTGAGAAATCTGAACACCATGATTATTGATCGAGTTTGTGAAGGCTATTCGGGGTTCGTGGACACCGACGCGGACGTCATGACGAGCCCGGTGAACCTGTGGTCGTTTTACGGATGCTGTTCTCCCGGAGCGGAGCCGGGACACGCGTCTCCGTGGCAGGCGAGCAGGGAGTGTGAGGAAGGCGGAAGCACCGCGGGGAGTCCACAGCGCCCTGACAGCGGCTTCAGCAGCGGCTACGttgAAGCTCAGGATGGTTCACGGCAGCTGAGTCCACAGTACCAGGGTGTGCGCgtgaaaaacacagtaaaagaGCTCATTATGCAGAAACGGCACAGTGAAGTACAGGTGCAGCCAAATAAGAATGAAGTTGAATTCCCAGtCATAACTACTTTGCTTCAGAGTGGAAAAAGAGCAGCTGAGAGTGCCTCACCTCACTGCGTCACTAAAAGACCTGCCACAGAACACAACAATGTCCTGTCTCCATATCTTTCAACTGAGAACATCCTGAAAGAGCAAAACATCTCTGAGGGACTCTGTGACATCTTCAGCAACACTGGGCTGTCTATCGAGTCGGTGAAGGTGCAGGGCAGCCTGATCTCAATCTGCCACCCACCTCAGGAGACACACGAAGCACTACCTACCCTCTATGCTACCACATCTAGCCCACTTTATAACAGCTGCCAGGCTCCTCAGGTTACAGAGAGCCCATACACACCTCCATTCCAGAGCCTGAGCCCACAGCATGGATTTAGGCCCAGTGGGAATACAGCTCCTCCAATTTCCTTTTTCCAGTGGCAGAtccagcaggaggaggagaaagtggCTGGTTTGAGCCCTCTGGATCTCATCTCTagggatggagatggagatacGTTCCTCCACATTGCGGTGGCCCAGGGTAGACGAGCCCTGGCCTACGTGCTCGCCAGGAAAATGAATGATATTGGCATGCTCGATGTCAAAGAGCATAACAACCAGAGTGCATTCCAAGTAAGCGTGGCAGCCAACCAGCATCTCATTGCGCAAGACCTCCTTTCAATGGGAGCCTTAGTAAACACTACAGACTCCTGGGGCCGCTCCCCCCTTCACGTGTGTGCTGAAAAGGGACACACTCTGATTCTACAGGCCATCCAAAAAGCGATGCAGAATAATGGCCTGAAGGTGAACATCGAGGCAGTCAACTATGATGGTCTTACCGCTCTACACATGGCTGTCCTGACCCACAATGCAGTGGTGCAGGATCTGAGCCGTGTGGCAGCACCTCAGTCTCCCCAAACCGCAGCTCTGATGCAGAAGAGGAAGATGCTCGGCGAATGTATCAACACTCTCCTGCTTATGGGTGCATCTTATGGTACAAAGGATCGCAAAAGTGGACGCACTGCCTTGCACATGGCTGCTGAGGAAGCCAACGTTGAGCTTTTGCGTCTTTTCCTGGACCAGCCGGACTCTCTTTCTGTGATCAATGCCAAGGCATATAATGGCAACACAGCACTGCACATGGCTGCTGCGCAAAATGGCCGTCAAGCGCAGGCACACGCCGTACAGCTGCTGATGAGGAGAGGAGCTGATCCTAGTGCCAAGAACCTGGAGAACGAGCAGCCCATTCAGCTCGTGCCTGAGGGGCATGTCGGGGATCAGGTGAGAAGGATCCTGAAAGGCCGCGGCCCGCAGGTTCGTTCCTGCTTGCTGTAGTAAGACCGATCTCGCCCGATCTCCGTCCGTCAGAAACACTGTCAGTCAGGCAGTCCGATCTGTGTACAGTCTCATTTGCCGGTATAAGGCAGATGTCAGTTGTTTCTATGAAACAAAGTTAACATTGTTCACTACTGTGTAGTAGAAGAGAAAGGGAAGTTGAGCTCAGAGTACATGGTACAAGATTTTTAATTAGGAATTAacaaacatgaaatgaaaagaaaaacaaacaggaaaaaaattaagagtTTATGAAAGTTACAGTGAAATTTGCATCTGTGACACCTCTGGGCTCTGGCGTGTAAAGGGTGGTTTTCCATTATATCGTTAATTctaatatattgtgatatatagtatatgtagaCAGCATGTGTACTGGTGtttgggttttattttattttattgtattttaattaatcCATTTTCCAAGAGAGTGCTGGTGGAAGGCTATGTATGGAAAAACAAAGTTCATGGTTATCAGAATGATTAACCATTGCCTAGTCATCAGACTCCAGCTCTGTGCCAGCTTCCTCATTTTTCTAATGTTCTCTTGATCTGAAACGATAAAATAAGCTAAAATACCTTTCAGCATGCTGACCTTGAAAATGTGGGCAGCTTGGAATATATTCAGATTTGCAGATGCCTATTTAAACACAgctatttaatttttgtgtgtaaaGTGCATGAATAATGTTCAAAACATAACACTCAAGGCGTTTATGATGACTTTATCTATGCCATATTTTTGGTTGCACTTATCGTATGATCTTTGTTATCTTTAGCGTGCCaacatattaaatatgtcaCGAGTTATAAGGATTACATTTCTATtacatttatgtgtatatatctgtgtctgtattagTTTTTTGCATAAATGATCTAAACATCTTGATTACACTGGTGATGGGGTTGCAAAGTGTACATGTATAAGTCATGTTGGTGAatcataaataaagatttaattatataaaccTCATCATGTGTACATGTATAAGTCATGTTGGTGAatcataaataaagatttaattatataaa

Function

symbol description
nfkbiz Predicted to be involved in regulation of gene expression. Predicted to be active in nucleus. Orthologous to human NFKBIZ (NFKB inhibitor zeta).

NR:

description
PREDICTED: NF-kappa-B inhibitor zeta-like

GO: NA

KEGG:

id description
K14242 NFKBIZ; NF-kappa-B inhibitor zeta

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026932045.2 True 2917 mRNA 0.47 12 6691664 6699031

Neighbor

gene id symbol gene type direction distance location
eed eed coding downstream 15743 6668223 ~ 6675921 (-)
hikeshi hikeshi,ck073 coding downstream 25591 6660785 ~ 6666073 (-)
LOC113537292 ccdc81 coding downstream 31577 6641064 ~ 6660087 (-)
LOC113537384 prss23,LOC107570079,LOC106575973 coding downstream 80757 6606600 ~ 6610907 (-)
LOC113537739 LOC108258596 coding downstream 191051 6468517 ~ 6500613 (-)
cep97 cep97 coding upstream 4403 6703434 ~ 6714568 (-)
LOC113537618 LOC108258862,LOC108258860,LOC108258861,LOC108258859,LOC108429797,LOC108261765 coding upstream 22297 6721328 ~ 6733356 (-)
LOC113537509 LOC108258862,LOC108258860,LOC108258861,LOC108258859,LOC108429797,LOC108261765,LOC108258858,LOC108434714 coding upstream 43556 6742587 ~ 6770718 (-)
LOC117595692 LOC108258862,LOC108258860,LOC108258859,LOC108258861,LOC108429797,LOC108261765 coding upstream 73324 6772355 ~ 6779290 (-)
mxh si:dkeyp-110c12.3,LOC108258858,LOC108434714 coding upstream 92129 6791160 ~ 6796139 (-)
G371487 NA non-coding downstream 124719 6563849 ~ 6566945 (-)
G371454 NA non-coding downstream 155660 6529397 ~ 6536004 (-)
G371134 mettl21c,LOC108429839 non-coding downstream 686874 6001838 ~ 6004790 (-)
G371135 NA non-coding downstream 690051 6001179 ~ 6001613 (-)
G371153 NA non-coding downstream 692190 5998848 ~ 5999474 (-)
G371595 NA non-coding upstream 109462 6808493 ~ 6815071 (-)
G371632 NA non-coding upstream 168713 6867744 ~ 6867960 (-)
G371625 NA non-coding upstream 180839 6879870 ~ 6881780 (-)
G371634 NA non-coding upstream 192735 6891766 ~ 6901343 (-)
G371787 NA non-coding upstream 452407 7151438 ~ 7153159 (-)
LOC113537742 LOC108258591 other downstream 328461 6358639 ~ 6363203 (-)
tpp2 tpp2,si:ch73-244f7.4,LOC107665822 other downstream 658271 6015726 ~ 6033393 (-)
LOC113537623 NA other downstream 739351 5942039 ~ 5952313 (-)
LOC113537235 son,LOC107698912,LOC107709257,LOC107698212,LOC107571887,LOC107555269,LOC565999 other downstream 1144632 5529992 ~ 5547032 (-)
LOC113537294 NA other downstream 1296652 5388904 ~ 5395012 (-)
pspc1 pspc1,LOC108258933,LOC108434730 other upstream 171535 6870566 ~ 6910546 (-)
LOC113537271 LOC108258282 other upstream 359804 7058835 ~ 7068531 (-)
LOC113537388 arhgap6 other upstream 658240 7357271 ~ 7478509 (-)
G372086 LOC108258915 other upstream 1019232 7718263 ~ 7724795 (-)
fam155a LOC108258331 other upstream 1213179 7912210 ~ 7993096 (-)

Expression


Co-expression Network