wbp1lb (LOC108259041)


Basic Information

Item Value
gene id wbp1lb
gene name LOC108259041
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047620.1
NCBI id CM018566.1
chromosome length 19313417
location 12563004 ~ 12570298 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026932390.2
TGCAGATGTTGTGCAACAGCTGGAAGTTCCGCGCCGAGAGGCACGCTGTTCCTCCTGAGACAGAGCAGCTATGAGCTGGGAGGAAGGAAGGCGGCGCATGTGCTCGCTTTTCACGTCTCTGACACGCGCAATGAACAAACCATAACTCTGATCTCGATGTTTGCGCTTTTACGAAACGCAGCGTGTTGTTGACAGCTGGATGTCGTGTGCAGAaatgggtttgtttttttacacagcTGGAACTGTCAGTCCCACAGAGGCGACTCTCGACCAGCAGTCACTGCAATGTGTTGGGGAGAATAACCAGAGCTACATTTGTGAGTCAGGGCACTGCTGTGAAGACCTGCAGTGCTGCAACTACTACTATGAGTTATGGTGGTTCTGGTTGATGTGTGCTATTATCTTCATCCTGAcctgttgctgtgtgtgtcGTCACCGCCGCGTCAAGCACagactgcagcagcagcagcgacaGCATGAGATCAACCTGATTGCCTACAGAGAGGCTCGCAACTACACCTCACCTCCATTCTACTTCAGGTTTCTACCAAGCAATCTCCTCCCTGACTATGAGGATGTAACAAATCATCCTCTCACCCCACCACCTCCCTACTGTAACTTAAACACCGGACCGCCAGCTTGTACCAACAGTGACCAAGAGGAGGCACAATGTCCATCCACACAAGCCACTCCTATGCCCACAGCATCGGCAGCACTGTGCTCCAGTCCTGACATAGTGGGGCTTGAGAACTCCAGGGAGAATCAGCAAAGAGATGATGGGAAAGACAGGGAGACCATACTGAAGCAGGACATGGATCACAAGGACCAGGAAAGGGATGTGGAAGTGCCTGAAGAGGAGACAGATGGGCTCATGGGAAGACGGCGCCACTTTACAGGCGACTCTGGCAttgaagtgtgtttgtgcagcCAAGGAATTGAGAGCGACAGACCCAAAGAGCTTGAGGAGCTGTTAAGCAATGAAGGCCACAGCAGCCCAATGGAGTTTTGCGATGGCTGTGGAGCTAGAGATGATAAAGACAATGAGCAGGGGACAGAGCTTGACGCATCACCACGACTACCACTATCACCACAGCTCCATCCTTCCTGCCTATATTTGCATACCATTAAGGAGCCAGAGGGGCCACAGGAGTGTCAGAGCTGAGCGGGATGATATCAAACATAAAGGAAACAGAGACCCAACAGTACACACCATTTTTTGTGGAtggtgtatacagtatgtgtaagcCTTTTGACAACCTGTTggttgaatgattttttttttttgtagagacAGCTGGGCTGGATGGGGGAAAGAATCATGGTGAATCCTGAGCCTATCCTAGAAACACTGGTttcgaggtgggaatacatcctgaatAAGGAATATGTCCTTCACAAGGCGtccaacacaaaacacactcattcacacctaggggtaatctggattagccaatccacttactggcatgttttgggaggttgAAAGGAAGCAGAGGTATAAGCAGTGACTTGAGATAATGACAAGATCCAAAGATCACACAAGATCAATAGAATTGTTCGGTTTAATGAGCGTTATTATGTTTTGGTGAGTGCAAAGTTTGGTGTGTGGCCATTCATTGGGGCAAGGATAAGTTCAAGTAGCTGTTTCTCCACACCACAAGTCTGATTGGGCTGAAATTTGGTGAAGCCTGGGATACTTAAAAACATGGCCAACATCAGCCAGTTggctttcagcaggcatttcacagGGTTAGCATTGAGCAATCATAAAACTTGAACAATCATTTATGGCCACTTTTGTTTTATgtaacttggcaagaactgaCCTATGGGAGTGATATTTGCAAAGGATGCTCGGACCCCGCAGATCACCCCTTGTAGTTATATTTACATGTTGATTTTTGTCAAGCTTTGTCATTGGGGCCAGTTTTAGTAATTCAAGCCTTGAAGTGCTTGTACATGAAAGCAACTTTTACTTTAAACCCCCATAGGTAAATGATAAAGTATCTTAATATTGTTCTAGCTAGACTAGCCTCTGCTTTGCACATTTTTCAATCTCTCCTGCCAAAACAGAGAACTTGAGATTGTGattgatttttttgcattatctTGCATGAATTATAGCAAAGTGaccaaaaaagtaaataaaagttatGAAAGTTGA
>XM_026932391.2
GTGCAGATGTTGTGCAACAGCTGGAAGTTCCGCGCCGAGAGGCACGCTGTTCCTCCTGAGACAGAGCAGCTATGAGCTGGGAGGAAGGAAGGCGGCGCATGTGCTCGCTTTTCACGTCTCTGACACGCGCAATGAACAAACCATAACTCTGATCTCGATGTTTGCGCTTTTACGAAACGCAGCGTGTTGTTGACAGCTGGATGTCGTGTGCAGAaatgggtttgtttttttacacagcTGGAACTGTCAGTCCCACAGAGGCGACTCTCGACCAGTCACTGCAATGTGTTGGGGAGAATAACCAGAGCTACATTTGTGAGTCAGGGCACTGCTGTGAAGACCTGCAGTGCTGCAACTACTACTATGAGTTATGGTGGTTCTGGTTGATGTGTGCTATTATCTTCATCCTGAcctgttgctgtgtgtgtcGTCACCGCCGCGTCAAGCACagactgcagcagcagcagcgacaGCATGAGATCAACCTGATTGCCTACAGAGAGGCTCGCAACTACACCTCACCTCCATTCTACTTCAGGTTTCTACCAAGCAATCTCCTCCCTGACTATGAGGATGTAACAAATCATCCTCTCACCCCACCACCTCCCTACTGTAACTTAAACACCGGACCGCCAGCTTGTACCAACAGTGACCAAGAGGAGGCACAATGTCCATCCACACAAGCCACTCCTATGCCCACAGCATCGGCAGCACTGTGCTCCAGTCCTGACATAGTGGGGCTTGAGAACTCCAGGGAGAATCAGCAAAGAGATGATGGGAAAGACAGGGAGACCATACTGAAGCAGGACATGGATCACAAGGACCAGGAAAGGGATGTGGAAGTGCCTGAAGAGGAGACAGATGGGCTCATGGGAAGACGGCGCCACTTTACAGGCGACTCTGGCAttgaagtgtgtttgtgcagcCAAGGAATTGAGAGCGACAGACCCAAAGAGCTTGAGGAGCTGTTAAGCAATGAAGGCCACAGCAGCCCAATGGAGTTTTGCGATGGCTGTGGAGCTAGAGATGATAAAGACAATGAGCAGGGGACAGAGCTTGACGCATCACCACGACTACCACTATCACCACAGCTCCATCCTTCCTGCCTATATTTGCATACCATTAAGGAGCCAGAGGGGCCACAGGAGTGTCAGAGCTGAGCGGGATGATATCAAACATAAAGGAAACAGAGACCCAACAGTACACACCATTTTTTGTGGAtggtgtatacagtatgtgtaagcCTTTTGACAACCTGTTggttgaatgattttttttttttgtagagacAGCTGGGCTGGATGGGGGAAAGAATCATGGTGAATCCTGAGCCTATCCTAGAAACACTGGTttcgaggtgggaatacatcctgaatAAGGAATATGTCCTTCACAAGGCGtccaacacaaaacacactcattcacacctaggggtaatctggattagccaatccacttactggcatgttttgggaggttgAAAGGAAGCAGAGGTATAAGCAGTGACTTGAGATAATGACAAGATCCAAAGATCACACAAGATCAATAGAATTGTTCGGTTTAATGAGCGTTATTATGTTTTGGTGAGTGCAAAGTTTGGTGTGTGGCCATTCATTGGGGCAAGGATAAGTTCAAGTAGCTGTTTCTCCACACCACAAGTCTGATTGGGCTGAAATTTGGTGAAGCCTGGGATACTTAAAAACATGGCCAACATCAGCCAGTTggctttcagcaggcatttcacagGGTTAGCATTGAGCAATCATAAAACTTGAACAATCATTTATGGCCACTTTTGTTTTATgtaacttggcaagaactgaCCTATGGGAGTGATATTTGCAAAGGATGCTCGGACCCCGCAGATCACCCCTTGTAGTTATATTTACATGTTGATTTTTGTCAAGCTTTGTCATTGGGGCCAGTTTTAGTAATTCAAGCCTTGAAGTGCTTGTACATGAAAGCAACTTTTACTTTAAACCCCCATAGGTAAATGATAAAGTATCTTAATATTGTTCTAGCTAGACTAGCCTCTGCTTTGCACATTTTTCAATCTCTCCTGCCAAAACAGAGAACTTGAGATTGTGattgatttttttgcattatctTGCATGAATTATAGCAAAGTGaccaaaaaagtaaataaaagttatGAAAGTTGA

Function

NR:

description
WW domain binding protein 1-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026932390.2 True 2164 mRNA 0.46 4 12563004 12570297
XM_026932391.2 False 2162 mRNA 0.46 4 12563004 12570298

Neighbor

gene id symbol gene type direction distance location
as3mt as3mt coding downstream 16581 12536497 ~ 12546423 (-)
cnnm2b cnnm2b,LOC108258315,LOC108435981,LOC107568787,LOC107699104,LOC107708677 coding downstream 27773 12502681 ~ 12535231 (-)
inab ina coding downstream 91393 12465957 ~ 12471611 (-)
lbx1b LOC108258340 coding downstream 142449 12418468 ~ 12420555 (-)
cenpk cenpk coding downstream 149973 12407030 ~ 12413031 (-)
poll poll coding upstream 741 12571039 ~ 12578393 (-)
fgf8b fgf8,fgf8b,LOC108258517,LOC107699081,LOC107568785,LOC107602739,LOC107738466,LOC107704317 coding upstream 15428 12585726 ~ 12592448 (-)
slc2a15b LOC108258984,LOC108435958,LOC107708658,LOC107704318,LOC107602731,LOC107699075 coding upstream 38755 12609053 ~ 12622350 (-)
LOC113537226 NA coding upstream 73641 12643939 ~ 12659493 (-)
pnpla4 pnpla4 coding upstream 173963 12744261 ~ 12751839 (-)
G375018 NA non-coding downstream 2179 12560601 ~ 12560825 (-)
G375001 NA non-coding downstream 36185 12526620 ~ 12526819 (-)
G374963 NA non-coding downstream 121465 12441321 ~ 12441539 (-)
G374962 NA non-coding downstream 125318 12437356 ~ 12437686 (-)
G374961 LOC108258298,LOC108258985,LOC108258304 non-coding downstream 125784 12436772 ~ 12437220 (-)
G375027 NA non-coding upstream 14147 12584445 ~ 12584659 (-)
G375028 NA non-coding upstream 14862 12585160 ~ 12585597 (-)
G375097 NA non-coding upstream 125717 12696015 ~ 12697218 (-)
G375119 NA non-coding upstream 171127 12741425 ~ 12741652 (-)
G375121 NA non-coding upstream 172022 12742320 ~ 12742520 (-)
mzt1 mzt1,si:dkey-15d12.2,LOC107556706 other downstream 478955 12078891 ~ 12084049 (-)
lipt1 lipt1 other downstream 1690448 10871224 ~ 10872556 (-)
cab39l cab39l,LOC107676861,LOC107718429 other downstream 2127637 10422152 ~ 10435367 (-)
LOC117596103 LOC102201964,LOC102304430 other downstream 2644225 9878843 ~ 9918779 (-)
tsga10 LOC108258346 other downstream 3952163 8591407 ~ 8610841 (-)
LOC113537246 NA other upstream 54753 12625051 ~ 12630403 (-)
gyg2 gyg2 other upstream 737415 13307713 ~ 13320530 (-)
G375428 NA other upstream 868921 13439219 ~ 13439535 (-)
klf5a LOC108259069 other upstream 1402038 13972336 ~ 13980251 (-)
pibf1 pibf1 other upstream 1412447 13982745 ~ 14016151 (-)

Expression


Co-expression Network