XLOC_000578 (si:ch211-138g9.2)


Basic Information

Item Value
gene id XLOC_000578
gene name si:ch211-138g9.2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 46026457 ~ 46030577 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00001008
AAAACCCAGAGAAAAGGAGGAAAGGGAAAAAAGTCTCTGCTTTCTTTAAGAGAGTATGGAAGGCTGCAAAGCGCCCTTTCCTTAGCTGTGACCAGAGCAGAGTGGTTCCCTTTGAACCACAGTCAGATAACGACTATTTCGAGCACCTGCCTGTTCCAGGTCCCTCCAGGACCGTCGCAGCACATGCAGACCCTGAGCCGGTGTTGCTGCCAGGCCAGGTCTGTGAAGAACCTCAGCCgttgagtgttccgggcccctCCAGGATCAAGCAAACAGCAGATGTGCCGAATGCAGATCGGGCCCGTCCTGAGTCCTCAACGGCCCTCACAGGTCATGTTGACACTGAGCAGATGCGTCCGCCAGTCCAGGTCTGCGACAGTCTCGAGTCGTTGGCTGTTCCAGGACCATCCAGGATCAAGCCAACGACCATCGCAGATCATGTTGACCCTGAGCAGATGCGTCCGCCAGTCCAGGTCTGTGAAGATCCTCAGCCCttgagtgttccgggcccctCCAATATTAAGAAAATGACGGATGCAGATTCGGTCAGTCCTGAGTCGCCTCCGTCTGTTCAAGACCCCTCTAAAATTGATGGGACTGATGaaaaccccaagaaaggaaggaaagggaAAAGAGTCTCTGCTTTCTTTAAGAGAGCATGGAAGGCTGCAAAGCTCCCTTTCCTGCATTTTACGCCACAGCCTGAGCCAGAGTCAGAGCCAGACCTTGAGTCAGTATGTCTGCCAGGCCAGGGTCCTGAGGAGGCTTCTGGGCTCACTCGGGgaCTCGATCTGACTCAGTTTGAAGTCGGAGACCTGATTGGAGAAGGAGCTTTTGGCCAGGTGTATGTGGCATCTCACAAACGCAGTAAAAGAGTAAAGGTTGCCCTGAAGTGCATGGTGAAGAGTCAACAGGACCGTTATCTGGACGTTGATGGTCATTCCACACCTGTGCTTGCAGAAGTGGCAATGATGCTTAGGTTGATGAATGCTCCGCGATGTCCAAACATCATCAGATTACACAACTGGCTTGAGGTTGAGGACAACTTTGTTCTCATTCTGGAGTACGCAGAGTCATACCAGACCTTGCTTCAGTACATCAAAGACACAGTGGACATTGAGGAAAACCAAGCACGCCAGTTAATGCGTCAGTTGATCCGAGCTATAATGTTCTGCACTGAGCGTGGAGTTTTCCATGGGGATATACACACAGCGAACATCCTGGTGACTCTACCCCGACTAGAGCTCAAATTGATCGACTTTGGTTGTGCTCAGCCAATTACCCAAAAGCCTTTCAACAAAAGTGACTATCGAGGAGCTGGACATGGCATGCCACCTGAGGCTTTGAGGTGTCGTGTATTCCATGCTAACCCGGCATACGTCTGGACAATAGGCATTATGCTGTATGAAATAATGCATGGACGACTGGCCTTCAATAACAGACAGTCAATAATGTTTGGCGCAATTCAGATACACCCCAGGTTATCCACAGCATGCGTGGACCTGATTTCCCAGTGTTTGATCCGTAATCCAGCTAAACGGCTACAGTTACACCAGGTAGAAGAGCACTGCTGGTTCAATCCAACGACCCCAAATCCTGTGAAGCAGTTATACAAGAGGAGaaAAAACTAAAGAAGCGAGGAGGAGGAGAGCACCATTTCCAGacatttcacaagactgttaaagttattaattactccctcatgtcattccaaacccctaaGACCTTACAGTCAGTGTCAGTTCATGATGTGTTGAAGAGAGCTCTGTCCTGTGCTgtatgtgtgtcgcactgctgacgtttacctcagatgtgcccacgctttgtttaaatgagaggaagtcgcgcaggcctctgggttaaACATCAGCAGTgtgacacacatacagtgcaggaCAGAACTTCTGAAGTcgtatttctgttttattatttttgtctttctGCATGAAAGAAGTTTCACTTAAAAATGACAGCTGTAGCTCCAAACCCCTGACAGCTTTCTTCATCTTCAGAAAACTAGTGAAAATATTTGAGATGAACTGCGAGAACTCTCTGATCCTCCATAAACCACAAGAATGAAGAAATGTTTAAA

Function

symbol description
si:ch211-138g9.2 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in negative regulation of apoptotic process; protein autophosphorylation; and regulation of mitotic cell cycle. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in cytoplasm.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000052677

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00001008 True 2092 mRNA 0.49 8 46026457 46030577

Neighbor

gene id symbol gene type direction distance location
XLOC_000577 eif5b coding upstream 5732 45925150 ~ 46020725 (+)
XLOC_000576 lipt1 coding upstream 102453 45922699 ~ 45924004 (+)
XLOC_000575 NA coding upstream 156960 45867040 ~ 45869497 (+)
XLOC_000574 map2k7 coding upstream 170279 45839927 ~ 45856178 (+)
XLOC_000572 pkn1a coding upstream 190290 45754868 ~ 45836167 (+)
XLOC_000579 NA coding downstream 2143 46032720 ~ 46153200 (+)
XLOC_000580 sox1b coding downstream 163756 46194333 ~ 46196107 (+)
XLOC_000581 NA coding downstream 186926 46217503 ~ 46219161 (+)
XLOC_000582 NA coding downstream 217041 46247618 ~ 46248591 (+)
XLOC_000583 NA coding downstream 219402 46249979 ~ 46251824 (+)
XLOC_000573 BX511120.1 non-coding upstream 257927 45768416 ~ 45768530 (+)
XLOC_000568 NA non-coding upstream 378211 45644766 ~ 45648246 (+)
XLOC_000567 NA non-coding upstream 627636 45383604 ~ 45398821 (+)
XLOC_000563 AL953855.1 non-coding upstream 855805 45170046 ~ 45170652 (+)
XLOC_000584 NA non-coding downstream 232874 46263451 ~ 46272326 (+)

Expression


Co-expression Network