AMCG00000204


Basic Information

Item Value
gene id AMCG00000204
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 6595323 ~ 6597169 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000204
ATGGCGACATTGAACCCCGTAGGTGCCACAATGATTCAAGATTCAATGGACCAGGGTTCAGGAGTCTGGACTCGTCCAACCTGCGTGCAGAGACAGATTCTGGCTTGGCTTCAGAGCTGTGGATCTGATGGGCTCTCTGAGTTCTCCAGCACCCATTCCTCTGTCAGCAGCGCCCCTCGTTCTGCCAGCCCCCTGCACACACCTATCTTTGACTCCAGCAGCCCACCTCACCTCGACCCACAGATGGCTGGGGAGCAGGCACTCGTCTCTCAGAGAGGAGgacgagaggagcccattgtAGAGGATGGTGATGCACTCACCGGTTCATCCATTGATGCAGACGAATGTGAGCGCTCAGAGGTCAGCGCCCTGTGCTCCATGGGGAGTGAGGACACCAAATCCAGTGTCCAGGTTGCCTCAGTCAGCAGTGTGGCGCCAGTGGTGAATAGCAGTGCTTTTCACCTGGATGCTGTCTTTGTAGAGGCTAACTCAGTCACAGAGAGTGTGGGCAGTGAGCTGCAGTACAAGTGTGCCGGCTGCCTGCAGTATCACCAGAGTGTGGCCTCCCTGCAGGCCCATCTGACACAGGGCTGGAGAGAGGGCTACAGCTGTGGGGTTTTCTACCGCACACTGCTCTCAATGCACCAGAGGAGAGGCCAGCAGCACAGGGAGCCGAGTCCCCAGGGCTCCAGGGCTCCCAGCAGCTCCCAGGCTGGAATCCACACAGCACAGGGCAGAGCTGGCCGGAAGTGCAGGGCAGAAGAGCAGGAGTCCCTCTGCCCTGACTACGCCCAGCAACAGAGCCCACACTGTGGACCTGCAGAGCTCCCGGCCGCCAGCCAGAATGAGAGCGGGCTCAGCGATGCCGGCTCCTCGGTCAGCAGTGTGGGGCTGCTGGTGAATAGCACTGCTCCTCACCTGCATGCTGCCTTTGTGAAGGCCATATCAGTCAAAGAGAGGGTGGGCAATGAGCGGCAGTACAAGTGTGCCGGCTGCCTGCGGTACCACCAGAGTCTGGCCTCCCTGCAGGACCATCTGGGGCAGGGCTTGATAGAGGGCTACAGCTGCGGGGTGAGTGGTCCATCAACAGAGTGTGAAAATGTTGTCTTCAAATAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000204 True 1116 mRNA 0.59 3 6595323 6597169

Neighbor

gene id symbol gene type direction distance location
AMCG00000203 LOC106571103 coding upstream 4183 6590583 ~ 6591140 (+)
AMCG00000199 scg5,LOC107721259 coding upstream 7396 6576279 ~ 6587927 (+)
AMCG00000200 NA coding upstream 20558 6564351 ~ 6574765 (+)
AMCG00000202 actc1a,actc1,act2,LOC105024319,LOC100194557 coding upstream 32503 6557842 ~ 6562820 (+)
AMCG00000181 NA coding upstream 230349 6357128 ~ 6364974 (+)
AMCG00000209 LOC108234815 coding downstream 139064 6736233 ~ 6770586 (+)
AMCG00000208 LOC108430665,LOC106587081,LOC106610839 coding downstream 185195 6782364 ~ 6857226 (+)
AMCG00000196 NA coding downstream 318578 6915747 ~ 6916898 (+)
AMCG00000195 NA coding downstream 344448 6941617 ~ 6946263 (+)
AMCG00000197 NA coding downstream 360265 6957434 ~ 6961282 (+)
G148656 NA non-coding upstream 288456 6306628 ~ 6306867 (+)
G148631 cyp1c1,cyp1c2,cyp1c3,LOC106610849 non-coding upstream 378864 6215756 ~ 6216459 (+)
G148618 LOC107745367 non-coding upstream 380563 6207353 ~ 6214760 (+)
G148609 NA non-coding upstream 447038 6147922 ~ 6148285 (+)
G148545 chp1 non-coding upstream 565546 6018043 ~ 6029777 (+)
G148764 NA non-coding downstream 326125 6923294 ~ 6927254 (+)
G148768 NA non-coding downstream 336131 6933300 ~ 6935160 (+)
G148791 NA non-coding downstream 494856 7092025 ~ 7092460 (+)
G148919 NA non-coding downstream 1086709 7683878 ~ 7684097 (+)
G148961 NA non-coding downstream 1162200 7759369 ~ 7759597 (+)
AMCG00000198 LOC106586563 other upstream 74460 6500893 ~ 6520863 (+)
AMCG00000201 NA other upstream 121091 6469345 ~ 6474232 (+)
AMCG00000175 NA other upstream 583926 6000911 ~ 6011397 (+)
AMCG00000166 srsf5,LOC106602985,LOC106611464 other upstream 707296 5881023 ~ 5888027 (+)
AMCG00000142 NA other upstream 1141117 5435158 ~ 5454206 (+)
AMCG00000216 srsf5b,srsf5,LOC107093669,LOC100707620,LOC102304179,LOC102202212,LOC103457348,LOC105936365,LOC105024333,LOC107756601,LOC107602033,LOC103029514,LOC103359433,LOC108233477 other downstream 693497 7290666 ~ 7296965 (+)
AMCG00000215 max,LOC107668248,LOC103457350 other downstream 716703 7313872 ~ 7324451 (+)
AMCG00000217 gpx2 other downstream 762109 7359278 ~ 7362707 (+)
AMCG00000251 NA other downstream 1975767 8572936 ~ 8575124 (+)
AMCG00000249 acta1,actc1,LOC103383882,LOC105024319 other downstream 1982548 8579717 ~ 8585273 (+)

Expression


Co-expression Network