Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00000292 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030141.1 |
| NCBI id | CM030141.1 |
| chromosome length | 22147039 |
| location | 9911136 ~ 9920082 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0072329 | monocarboxylic acid catabolic process | biological_process |
| GO:0017001 | antibiotic catabolic process | biological_process |
| GO:0019541 | propionate metabolic process | biological_process |
| GO:0019543 | propionate catabolic process | biological_process |
| GO:0009062 | fatty acid catabolic process | biological_process |
| GO:0019626 | short-chain fatty acid catabolic process | biological_process |
| GO:0046459 | short-chain fatty acid metabolic process | biological_process |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00000292 | True | 1404 | mRNA | 0.53 | 9 | 9911136 | 9920082 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00000294 | smoc1 | coding | upstream | 34192 | 9864987 ~ 9876944 (+) |
| AMCG00000293 | NA | coding | upstream | 70707 | 9828089 ~ 9840429 (+) |
| AMCG00000282 | NA | coding | upstream | 164128 | 9721890 ~ 9747008 (+) |
| AMCG00000283 | NA | coding | upstream | 205687 | 9688747 ~ 9705449 (+) |
| AMCG00000280 | NA | coding | upstream | 350660 | 9557518 ~ 9560476 (+) |
| AMCG00000306 | arg2 | coding | downstream | 82639 | 10002721 ~ 10010111 (+) |
| AMCG00000307 | NA | coding | downstream | 143729 | 10063811 ~ 10072297 (+) |
| AMCG00000297 | atp6v1d,LOC106571673,LOC107559096,LOC107568214 | coding | downstream | 172911 | 10092993 ~ 10100250 (+) |
| AMCG00000305 | NA | coding | downstream | 628748 | 10548830 ~ 10549199 (+) |
| AMCG00000304 | NA | coding | downstream | 629850 | 10549932 ~ 10550914 (+) |
| G149359 | LOC103376870 | non-coding | upstream | 134148 | 9719947 ~ 9776988 (+) |
| G149253 | NA | non-coding | upstream | 625985 | 9280063 ~ 9285151 (+) |
| G149172 | psmc6 | non-coding | upstream | 894985 | 9013371 ~ 9016151 (+) |
| G149059 | NA | non-coding | upstream | 1237350 | 8668980 ~ 8673786 (+) |
| G149056 | NA | non-coding | upstream | 1326169 | 8584488 ~ 8584967 (+) |
| G149416 | slc39a9,LOC107721951,LOC107664419 | non-coding | downstream | 37631 | 9957713 ~ 9962571 (+) |
| G149415 | NA | non-coding | downstream | 52966 | 9973048 ~ 9975172 (+) |
| G149450 | NA | non-coding | downstream | 101340 | 10021422 ~ 10021853 (+) |
| G149454 | NA | non-coding | downstream | 109612 | 10029694 ~ 10030786 (+) |
| G149455 | NA | non-coding | downstream | 114492 | 10034574 ~ 10035072 (+) |
| AMCG00000281 | cpsf2,LOC106608196 | other | upstream | 320048 | 9561557 ~ 9591088 (+) |
| AMCG00000286 | sos2 | other | upstream | 364725 | 9514822 ~ 9546411 (+) |
| AMCG00000285 | map4k5 | other | upstream | 424447 | 9440061 ~ 9486689 (+) |
| AMCG00000249 | acta1,actc1,LOC103383882,LOC105024319 | other | upstream | 1325863 | 8579717 ~ 8585273 (+) |
| AMCG00000251 | NA | other | upstream | 1336012 | 8572936 ~ 8575124 (+) |
| G149424 | NA | other | downstream | 49242 | 9969324 ~ 9970801 (+) |
| G149525 | LOC100846954,LOC107575789 | other | downstream | 614508 | 10534590 ~ 10535137 (+) |
| AMCG00000352 | NA | other | downstream | 2045473 | 11965555 ~ 11995026 (+) |
| G149859 | NA | other | downstream | 2759588 | 12679670 ~ 12727903 (+) |
| AMCG00000381 | NA | other | downstream | 3046795 | 12966877 ~ 13030853 (+) |
