Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00000293 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030141.1 |
| NCBI id | CM030141.1 |
| chromosome length | 22147039 |
| location | 9828089 ~ 9840429 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0008454 | alpha-1,3-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00000293 | True | 546 | mRNA | 0.56 | 6 | 9828089 | 9840429 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00000282 | NA | coding | upstream | 81081 | 9721890 ~ 9747008 (+) |
| AMCG00000283 | NA | coding | upstream | 122640 | 9688747 ~ 9705449 (+) |
| AMCG00000280 | NA | coding | upstream | 267613 | 9557518 ~ 9560476 (+) |
| AMCG00000288 | l2hgdh | coding | upstream | 319165 | 9501693 ~ 9508924 (+) |
| AMCG00000287 | cdkl1 | coding | upstream | 326721 | 9487917 ~ 9501368 (+) |
| AMCG00000294 | smoc1 | coding | downstream | 24558 | 9864987 ~ 9876944 (+) |
| AMCG00000292 | NA | coding | downstream | 70707 | 9911136 ~ 9920082 (+) |
| AMCG00000306 | arg2 | coding | downstream | 162292 | 10002721 ~ 10010111 (+) |
| AMCG00000307 | NA | coding | downstream | 223382 | 10063811 ~ 10072297 (+) |
| AMCG00000297 | atp6v1d,LOC106571673,LOC107559096,LOC107568214 | coding | downstream | 252564 | 10092993 ~ 10100250 (+) |
| G149359 | LOC103376870 | non-coding | upstream | 51101 | 9719947 ~ 9776988 (+) |
| G149253 | NA | non-coding | upstream | 542938 | 9280063 ~ 9285151 (+) |
| G149172 | psmc6 | non-coding | upstream | 811938 | 9013371 ~ 9016151 (+) |
| G149059 | NA | non-coding | upstream | 1154303 | 8668980 ~ 8673786 (+) |
| G149056 | NA | non-coding | upstream | 1243122 | 8584488 ~ 8584967 (+) |
| G149416 | slc39a9,LOC107721951,LOC107664419 | non-coding | downstream | 117284 | 9957713 ~ 9962571 (+) |
| G149415 | NA | non-coding | downstream | 132619 | 9973048 ~ 9975172 (+) |
| G149450 | NA | non-coding | downstream | 180993 | 10021422 ~ 10021853 (+) |
| G149454 | NA | non-coding | downstream | 189265 | 10029694 ~ 10030786 (+) |
| G149455 | NA | non-coding | downstream | 194145 | 10034574 ~ 10035072 (+) |
| AMCG00000281 | cpsf2,LOC106608196 | other | upstream | 237001 | 9561557 ~ 9591088 (+) |
| AMCG00000286 | sos2 | other | upstream | 281678 | 9514822 ~ 9546411 (+) |
| AMCG00000285 | map4k5 | other | upstream | 341400 | 9440061 ~ 9486689 (+) |
| AMCG00000249 | acta1,actc1,LOC103383882,LOC105024319 | other | upstream | 1242816 | 8579717 ~ 8585273 (+) |
| AMCG00000251 | NA | other | upstream | 1252965 | 8572936 ~ 8575124 (+) |
| G149424 | NA | other | downstream | 128895 | 9969324 ~ 9970801 (+) |
| G149525 | LOC100846954,LOC107575789 | other | downstream | 694161 | 10534590 ~ 10535137 (+) |
| AMCG00000352 | NA | other | downstream | 2125126 | 11965555 ~ 11995026 (+) |
| G149859 | NA | other | downstream | 2839241 | 12679670 ~ 12727903 (+) |
| AMCG00000381 | NA | other | downstream | 3126448 | 12966877 ~ 13030853 (+) |
