Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00000305 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030141.1 |
| NCBI id | CM030141.1 |
| chromosome length | 22147039 |
| location | 10548830 ~ 10549199 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00000305 | True | 360 | mRNA | 0.49 | 2 | 10548830 | 10549199 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00000297 | atp6v1d,LOC106571673,LOC107559096,LOC107568214 | coding | upstream | 448580 | 10092993 ~ 10100250 (+) |
| AMCG00000307 | NA | coding | upstream | 476533 | 10063811 ~ 10072297 (+) |
| AMCG00000306 | arg2 | coding | upstream | 538719 | 10002721 ~ 10010111 (+) |
| AMCG00000292 | NA | coding | upstream | 628748 | 9911136 ~ 9920082 (+) |
| AMCG00000294 | smoc1 | coding | upstream | 671886 | 9864987 ~ 9876944 (+) |
| AMCG00000304 | NA | coding | downstream | 733 | 10549932 ~ 10550914 (+) |
| AMCG00000314 | dnal1 | coding | downstream | 578659 | 11127858 ~ 11131679 (+) |
| AMCG00000313 | NA | coding | downstream | 598456 | 11147655 ~ 11169942 (+) |
| AMCG00000315 | NA | coding | downstream | 672516 | 11221715 ~ 11233015 (+) |
| AMCG00000350 | tmem121a,tmem121,LOC107594772,LOC107377718,LOC107674105 | coding | downstream | 1021146 | 11570345 ~ 11571229 (+) |
| G149486 | NA | non-coding | upstream | 457723 | 10090883 ~ 10091107 (+) |
| G149466 | NA | non-coding | upstream | 497077 | 10051176 ~ 10051753 (+) |
| G149465 | NA | non-coding | upstream | 499298 | 10049265 ~ 10049532 (+) |
| G149464 | NA | non-coding | upstream | 500209 | 10048396 ~ 10048621 (+) |
| G149455 | NA | non-coding | upstream | 513758 | 10034574 ~ 10035072 (+) |
| G149538 | NA | non-coding | downstream | 163278 | 10712477 ~ 10712681 (+) |
| G149556 | NA | non-coding | downstream | 437771 | 10986970 ~ 11051228 (+) |
| G149560 | NA | non-coding | downstream | 541390 | 11090589 ~ 11091019 (+) |
| G149566 | NA | non-coding | downstream | 584202 | 11133401 ~ 11134033 (+) |
| G149572 | NA | non-coding | downstream | 626463 | 11175662 ~ 11176066 (+) |
| G149525 | LOC100846954,LOC107575789 | other | upstream | 13693 | 10534590 ~ 10535137 (+) |
| G149424 | NA | other | upstream | 578029 | 9969324 ~ 9970801 (+) |
| AMCG00000281 | cpsf2,LOC106608196 | other | upstream | 957742 | 9561557 ~ 9591088 (+) |
| AMCG00000286 | sos2 | other | upstream | 1002419 | 9514822 ~ 9546411 (+) |
| AMCG00000285 | map4k5 | other | upstream | 1062141 | 9440061 ~ 9486689 (+) |
| AMCG00000352 | NA | other | downstream | 1416356 | 11965555 ~ 11995026 (+) |
| G149859 | NA | other | downstream | 2130471 | 12679670 ~ 12727903 (+) |
| AMCG00000381 | NA | other | downstream | 2417678 | 12966877 ~ 13030853 (+) |
| G150069 | NA | other | downstream | 3141640 | 13690839 ~ 13692589 (+) |
| AMCG00000412 | pgf,LOC102799665,LOC102204058,LOC106593515,LOC106611025 | other | downstream | 3583939 | 14133138 ~ 14153840 (+) |
