Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00000307 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030141.1 |
| NCBI id | CM030141.1 |
| chromosome length | 22147039 |
| location | 10063811 ~ 10072297 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0005634 | nucleus | cellular_component |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00000307 | True | 524 | mRNA | 0.49 | 4 | 10063811 | 10072297 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00000306 | arg2 | coding | upstream | 53700 | 10002721 ~ 10010111 (+) |
| AMCG00000292 | NA | coding | upstream | 143729 | 9911136 ~ 9920082 (+) |
| AMCG00000294 | smoc1 | coding | upstream | 186867 | 9864987 ~ 9876944 (+) |
| AMCG00000293 | NA | coding | upstream | 223382 | 9828089 ~ 9840429 (+) |
| AMCG00000282 | NA | coding | upstream | 316803 | 9721890 ~ 9747008 (+) |
| AMCG00000297 | atp6v1d,LOC106571673,LOC107559096,LOC107568214 | coding | downstream | 20696 | 10092993 ~ 10100250 (+) |
| AMCG00000305 | NA | coding | downstream | 476533 | 10548830 ~ 10549199 (+) |
| AMCG00000304 | NA | coding | downstream | 477635 | 10549932 ~ 10550914 (+) |
| AMCG00000314 | dnal1 | coding | downstream | 1055561 | 11127858 ~ 11131679 (+) |
| AMCG00000313 | NA | coding | downstream | 1075358 | 11147655 ~ 11169942 (+) |
| G149466 | NA | non-coding | upstream | 12058 | 10051176 ~ 10051753 (+) |
| G149465 | NA | non-coding | upstream | 14279 | 10049265 ~ 10049532 (+) |
| G149464 | NA | non-coding | upstream | 15190 | 10048396 ~ 10048621 (+) |
| G149455 | NA | non-coding | upstream | 28739 | 10034574 ~ 10035072 (+) |
| G149454 | NA | non-coding | upstream | 33025 | 10029694 ~ 10030786 (+) |
| G149486 | NA | non-coding | downstream | 18586 | 10090883 ~ 10091107 (+) |
| G149538 | NA | non-coding | downstream | 640180 | 10712477 ~ 10712681 (+) |
| G149556 | NA | non-coding | downstream | 914673 | 10986970 ~ 11051228 (+) |
| G149560 | NA | non-coding | downstream | 1018292 | 11090589 ~ 11091019 (+) |
| G149566 | NA | non-coding | downstream | 1061104 | 11133401 ~ 11134033 (+) |
| G149424 | NA | other | upstream | 93010 | 9969324 ~ 9970801 (+) |
| AMCG00000281 | cpsf2,LOC106608196 | other | upstream | 472723 | 9561557 ~ 9591088 (+) |
| AMCG00000286 | sos2 | other | upstream | 517400 | 9514822 ~ 9546411 (+) |
| AMCG00000285 | map4k5 | other | upstream | 577122 | 9440061 ~ 9486689 (+) |
| AMCG00000249 | acta1,actc1,LOC103383882,LOC105024319 | other | upstream | 1478538 | 8579717 ~ 8585273 (+) |
| G149525 | LOC100846954,LOC107575789 | other | downstream | 462293 | 10534590 ~ 10535137 (+) |
| AMCG00000352 | NA | other | downstream | 1893258 | 11965555 ~ 11995026 (+) |
| G149859 | NA | other | downstream | 2607373 | 12679670 ~ 12727903 (+) |
| AMCG00000381 | NA | other | downstream | 2894580 | 12966877 ~ 13030853 (+) |
| G150069 | NA | other | downstream | 3618542 | 13690839 ~ 13692589 (+) |
