AMCG00000323


Basic Information

Item Value
gene id AMCG00000323
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 11704595 ~ 11714618 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000323
TTAATGTGTCTGTGTTCCTCTGCAGTGTGGGACGGTCCTGAAGAAGTTGTTCCCTGCATCTGGCTTGGGGCCCTGTGCAGCCATCGTACGGGAGGAGGAGCCCGGTGCCTTGAGGAAATGTGAATATATAATGAGTTTCTGCAGAGCTGCCCCCTACAGGGAACCACGGAACCCTGCAGCTCCCCCCACACAGCACCCTGCCCGGCGgtttgcAACTATGCACGTCAAGCCATATCCCAAATTTCAAAAGAAAGAGCTACAGCTGGAAACGAGCCAAGACAACCTAAGAGGCCTTCACTCGAGCCAGCCAGGGGTACTGAGGACAGACAGATGTGCAAACACCTGCACCAGCCGTCAGCCCTGCTCTCTGGGGGGGGTGCCTAGCAATGGGACGACCAATCGACGTCCTTTTGGAGTTATATCCACAAACACTTTCTGCAACAGCCCCGGCCCTAAGATCAACACTGAACCTCCGAGCTGCCGAGGGAAGAAGAGCAAGGTGTCGGTGGTGAACTCGCTGACCGGGTccttgctgctgctgtcctccaCGTCGGTCAGCGACGACTCCCTCACGCTccaggaggaggaaggagaggggcCTCTGGATATCTGGGCAGTGATCAAGCCCGGGAACACCAAGGAGAAAATTGCCATCTTTGCTGCCCATCAGTGCAATAACTCCAATGGCAGCGGCAGTGTCAGTATTGGGAGCAGTGGGAGCAGCAGTAGCAGCCGAACAATCTCCATGAAAATTAAGGGTAGCTGGGAAGTGGAAGGGTCTGTCGCCAAACGCAGAAAAAGATCTGCAGGCCCTGACAAATCCAAGGCCCCAGAGCAGCATCCGCCCTCTAGGACAAGGGACTGTGGGACAAAGGTGGCTGCAGTAAGGTGTCTTCCCTGCAGTGACAGGGGGGAGCAGTCCTACACAGTGGTCATTGAGGGGGAGAAtgtggaggaaggggaggagggagggaaaacACTCTCTGTTGTTGAGATGGTGGCCTACCTGGAGCAGAGGGCCAACGCCCTGCACATGGACTGCACTAAGCCAAGCTTGGTGCGAGGCTCGGGCTGCATTGTGCTGTCAAAGGAGCAGCAAGGCGGTGTAGTTCCTGAAGATCACAGGAGCCCCGAGGAGATGCAAGGAGAGTGTGTGAGGGTGCTGGACATGGTGGCCAAGCTTGAATCCGAGTGCCTGAAACGTCAGTGCGAGAGGGAGGCGGGCGGGCTGTCGCGCAATAACAGCCTTCGCAGGAATGTGGGGAGAGTATTGCTGGCAGTTGGCGAGTCTTCCCCACTTCCCTCACAGGAACAGGCAGACCATGAACCCTCACCTCAAAAGGACAATCTGGAAGAATGTTCTGCTAAGAGGAACACAGGCAGAGACACTAGCCCACGGGGTCACTGTGAAGTGGCTCCTTCTGAAACTGCTATTGTGGTCTATAGGGAATCTAATGGGTGTGGAGTATTTATTGCTGAGGAGTCCAGTACCTTGGATAGCAGGGTTAAGAGCAACGAGGACTCTGGTGATTTGGCGAGACTGGGACAGCAGGAGGCAGCCTGTGCTGGAGTGTCACCCTCCCTCAAGGAGGCCGACTTGAGCATCTCAGCCGGGCTACAGCAGGAGACGCGGACGGAGGACGAGCCCCACGCTGGCTACCGTGAGGAGCCGCTTCCGGGGATGCTGTTTTTCAAACAGACTTCAGCGTCGCCTGCAAAGGACCAGGTCTCGCACTCGGCACAAGAAACTGCACCCAAACCTGAGGACGACGGCACCTCTGCACAGCCCACCGATCCCACCCTGGACTATACCAGGGCTGAGGACACCCCGAATACTCCCGTGGAGGAAGAGAGGTATGCAGGTCAGGAGCGTTTTCCTTTCCCTATGAGAAAGCTGGTTTCTCATGACTTCCTGGAGGCGCGCTTCAAGATCCAGCAGCTGCTGGAGCCTCAACAGTACATGGCCTTCCTGCCTCACCACATCATGGTCAAGATCTTCTGCTTCTTGCCCACCGAGACGCTCGCAGCCCTGAAGTGCACCTGCCACTACTTCAAGTTCATCATCGAAAGCTACAACGTGCGGCCGGCCGACTCGCGCTGGGTCAGTGACCCTCGATACAAAGACGACCCCTGCAAGCAGTGCAAGAAGCGCTACGGCCGAGGCGACGTCTCCCTCTGCCGCTGGCACCACAAGCCCTACTGTCAAGCGTTACCCTACGGACCAGGCTACTGGATGTGCTGCCACGGCTCCCAGAAAGACAGCCCTGGCTGTAACGTGGGGCTGCATGACAACCGCTGGGTGCCCGCCTTCCACAGCATTAACATGCCAATGTACAAGAAAGTGCGGGACACTGAGGAGGACTCTTAGGTGGGTCTGCCAGGGGGTGCTTTTTAATCTAGGGCTTTttgcgtgtgcgcgtgtgttAGATTGTGAACAGGTTGCTGACACTAATGTGGAATCACTGGATCACTTCCCTCTGGTCAGGAGGTTCAGAATGGTGATCTCTCAATTTATGTGAATATTTCTGTTAAACagtaacaaacataaaaaatgtgattCCGCCATTCTCATGGTCACCCCTCAAAAACACTCTGATATTTTGAACAAACTGAGACTTTTCCTCGGAGGAGAATATCGGCATGTCATCATCAGGACTCCTGAGTTGctgaattttgttttacttttggtactggCGCTTCCTTCTTTTCAAAGAGCattgaattattataatttgataaattatactattataatTTCAGTAATCCTTTAAAGCTTGTTTACAGATCTGATGTGAAAATGTCATATTGTTCCTGAGCAGTTCTCCTAACAGACTACTAaaccagatttgttttcttcaatgtaAACCTGGGCCAGATAGATGTAATGCATACTTGATGTGCTTCACATTTATTGTACTTGGTTTACATCCATTATAGTACTAGGGAAATGCTGATGAATGTGCTGGTATTGacaaatgacacaaaacatTTGAGAAATTCCGACTGTCATCAGTTACGAATATCAGTAGTTAATTTCCCTTATACAAACTTCTATACATCAATGAATGATTCTTTAAAAAGAGCTGTAATGTgaatctaattttttttttttttttttatacatactaTATAATCTGCTAAAAAAATATCAGCTTCCTCCTCGAGGGGCCTGTCTTGACCAGTGATGGGAAAGTTAGTGTGACAACCTGAGGTTTTCATTGAGTGACTGGAGAATGATTCTAGCCCTGTTGTTTACAATGTATATAATACAGAATCATATCAATCCATACAGGGTGAGGAATGATGCATGCACAGTACTTGAGAAAGCATCTACCTTCAGTGGGTGGAACACACTTTTACCcctgttgtgtatatatttaaaagaaataatcCGAGTTGTACTATAGAGCTGGCGTAGCCTCTTAACCTCTACAATGCAGCTGTCCTAGCTTTGCAagttagtgttttttgttttacatgttttttttttcttttttaaagcgTTATTATCCCATGTGTAATCTGTTTCTgaagggaaacatttaaatatggaGAAAGAGAACTCAGTTCTGTTCTTTATAATGGCTTAAACTGGACATCTTCTGAAAAATCAGGATTTCTAAAATGGACAATTAAACCCAAGAGCAAAGacaagacaagaaaataaagattttaaagcattattgtACAATGACCCCGTTATAAGAGCATAATTGTTTCTGCCTGTATAGGCATTTTACTTCAATAAAGTGTGCATTCTTAGGCGTTGTCAGCTATTGTTTTGGTGCTGCTTCATGCTTTCTTCACtgtctcttgttttgtttctcaaattGTTAAACCAAAACGTGGTCATGGTAAATAAACAGTGAATTTTCCCATGAACGATGAGCATTTTAAGAAGCAGTCCTCGTGAGGATCCCTGTACAGAGAAGTGAGAGGTTTAACTCGCGTACCCAGAGTGAAGGACTTGACTCCAAATCCTAATCTGCTTTTTAGACAGCTGTCTAAAATAAAGAGCATTAAAACCTTCCAATCTGATGTGATTgattaaatttaataaatggAGAGGGTAGACCTCCCTACACTGGGTATTAAAATGGGTAACTGCACGAGGGTGGGAGACGTCCCTGTGATGTTTTGAGTTTAGTGGCCTTGTAaaaccactgcacatttttctactGCTTTCACCAAGCACGTTTTCGGAGCCCCAGCTCGGCCTGGAGGGACACAGGGAGCGACTTCGTTCTGCCTCTCCAGGAGGGTTCGGGAGGTTTTAGAGGGCTGTGTGTGAAGCTCACACTGCTCATGTTGTATTGAACTGACTCTTGGAGGTTAAAATGGTTACAATcaatcactttatttttatttttccccccttttaaGCACTCAAGCTAgtcacaggaaaataaattgcaaatttgGGATTGGGTTTTAATATTCCAGAATCTACCCttcacagaaatgcaaaatgaatatatatttttaatcaatcgCTGTTTAAATAGGATTCTAATATACCTAAAACAGAGGATTACACACTgggtgtaatatatatatattttgtaaccgCAAGATTATCTTTTCAAGAACAGGCCCTGGCATGCATACTTCTCAGTTGTGAAGTCTGCCAACCTTTCTTATTCTTGCTTTTGGTGTGTTTTGGATCACATTGTAAGACTGAATTGTGCGGGGTGTTTTCTGTGTTCGTGTATCTGCGCACTGCAGAGTGAGAAAACGACATGCTCGACTTGTTTCTGTAATGTACCTTTGGGAGTTCGCCCTACCTGCTTATCAGTTTGAAGTCTTATCTTTGAATTCAACCACATCATTGAGATAAAAGCAGATCATATTTACTCTTATGAATAAGGAttgctgaataaaaaaa

Function

GO: NA

KEGG:

id description
K10311 FBXO34; F-box protein 34

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000323 True 4885 mRNA 0.47 2 11704595 11714618

Neighbor

gene id symbol gene type direction distance location
AMCG00000326 NA coding upstream 16116 11685554 ~ 11688479 (+)
AMCG00000325 NA coding upstream 24897 11677153 ~ 11679698 (+)
AMCG00000327 NA coding upstream 29908 11672207 ~ 11674687 (+)
AMCG00000350 tmem121a,tmem121,LOC107594772,LOC107377718,LOC107674105 coding upstream 133366 11570345 ~ 11571229 (+)
AMCG00000315 NA coding upstream 471580 11221715 ~ 11233015 (+)
AMCG00000324 jmjd7 coding downstream 17778 11732396 ~ 11734499 (+)
AMCG00000332 NA coding downstream 122175 11836793 ~ 11839680 (+)
AMCG00000353 NA coding downstream 151537 11866155 ~ 11886897 (+)
AMCG00000351 ivd,LOC107719458 coding downstream 319513 12034131 ~ 12041923 (+)
AMCG00000339 NA coding downstream 361438 12076056 ~ 12090893 (+)
G149602 NA non-coding upstream 266776 11437369 ~ 11437819 (+)
G149595 NA non-coding upstream 336370 11338391 ~ 11368225 (+)
G149591 NA non-coding upstream 378044 11326186 ~ 11326551 (+)
G149587 NA non-coding upstream 481488 11222829 ~ 11223107 (+)
G149572 NA non-coding upstream 528529 11175662 ~ 11176066 (+)
G149666 NA non-coding downstream 72475 11787093 ~ 11791091 (+)
G149667 NA non-coding downstream 77253 11791871 ~ 11792096 (+)
G149668 NA non-coding downstream 78749 11793367 ~ 11794856 (+)
G149672 NA non-coding downstream 82757 11797375 ~ 11798007 (+)
G149673 NA non-coding downstream 84943 11799561 ~ 11799878 (+)
G149525 LOC100846954,LOC107575789 other upstream 1169458 10534590 ~ 10535137 (+)
G149424 NA other upstream 1733794 9969324 ~ 9970801 (+)
AMCG00000281 cpsf2,LOC106608196 other upstream 2113507 9561557 ~ 9591088 (+)
AMCG00000286 sos2 other upstream 2158184 9514822 ~ 9546411 (+)
AMCG00000285 map4k5 other upstream 2217906 9440061 ~ 9486689 (+)
AMCG00000352 NA other downstream 250937 11965555 ~ 11995026 (+)
G149859 NA other downstream 965052 12679670 ~ 12727903 (+)
AMCG00000381 NA other downstream 1252259 12966877 ~ 13030853 (+)
G150069 NA other downstream 1976221 13690839 ~ 13692589 (+)
AMCG00000412 pgf,LOC102799665,LOC102204058,LOC106593515,LOC106611025 other downstream 2418520 14133138 ~ 14153840 (+)

Expression


Co-expression Network