AMCG00000327


Basic Information

Item Value
gene id AMCG00000327
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030141.1
NCBI id CM030141.1
chromosome length 22147039
location 11672207 ~ 11674687 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00000327
CGGGATACTACCCTTATCTGTCAGCATTGCGTGTAACACAAGCCCCGAAGTAGCGCAGCTCCAGCACTTCCTGCTGTTGTCTCATTTCATGTACTTTCTCCTGAGCTGCTGGTAACCTTATATCTGACGTCTTCGCAGCGATCCTCTTTCTTACgaCATGGATGACTTTTCGGGTGGCCTGGCTCAGCCCCTGGGGCCCCACAGTTTCCACATTCAGGCCCTTCTGCTCCCCCTACTGGAGGTCCTGGTCAGCCCCCTGCTCCAGGGATGTATCCAGGGGGGGCACACCCTTCAGGCCCAGGTGCACCAGGGCACTTTCCTGGTGGTCCATCAGCTCCAGGACAGTATCCTTCTGGCCCAGCCCCTGGACAATATCCCTCTGGTATTGGAGCACCAGGACAATACTGTGGGGGTCCAGGGCCATATCCTTCTGGCCCTGGGGCTCCAGGGCAGTTTCCCTCAGGTCCTGGGGCCCCAGGGCAAtatcctgctggaggaggagccCCAGGACAAtatcctgctggaggaggagccCCAGGACAAtatcctgctggaggaggagccCCAGGACAAtatcctgctggaggaggagccCCAGGACAGTTCCCAGGAGGAGCCCCAGGGCAAtatcctgctggaggaggagccCCAGGGCAAtatcctgctggaggaggagccCCAGGGCAAtatcctgctggaggaggagccCCAGGACAATATCCTGCTGGAGGAGCACCGGGACAGTTCCCAAGAGGAGCTCCAGGACAATACCAACCTGGAGCTCCTGGCCCATATCCTTCCGGACCTGGAGCCCCATCAGGGCCCTATCCTAACTTTCCCTTCCCTGGTGGACAGCCTCCAACAGGACCTGGTGCATACCCCTCTGCTTCAGGTTCTGGCCCCTACCCTGGCTTCCCTGGAGGATCATACCCTCCCATTCCTCCTGGTTCCTGGGGTCCCCCCAACTCTGGGCCATTCCCAGGCCAGCCTGGCCACCCTGGCCACCCTGGCCAACCTGGCCAACCTGGCCACCCTGGCCACCCAGGCTCTTTTGGCCCAGGATCTGCTGGCCCCTATCCCTACCCCAACCCTTCGTTCGGTGGTCCTCCTGGATCGGGGGGAGTTCTGGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00000327 True 1132 mRNA 0.61 3 11672207 11674687

Neighbor

gene id symbol gene type direction distance location
AMCG00000350 tmem121a,tmem121,LOC107594772,LOC107377718,LOC107674105 coding upstream 100978 11570345 ~ 11571229 (+)
AMCG00000315 NA coding upstream 439192 11221715 ~ 11233015 (+)
AMCG00000313 NA coding upstream 502265 11147655 ~ 11169942 (+)
AMCG00000314 dnal1 coding upstream 540528 11127858 ~ 11131679 (+)
AMCG00000304 NA coding upstream 1121293 10549932 ~ 10550914 (+)
AMCG00000325 NA coding downstream 2466 11677153 ~ 11679698 (+)
AMCG00000326 NA coding downstream 10867 11685554 ~ 11688479 (+)
AMCG00000323 NA coding downstream 29908 11704595 ~ 11714618 (+)
AMCG00000324 jmjd7 coding downstream 57709 11732396 ~ 11734499 (+)
AMCG00000332 NA coding downstream 162106 11836793 ~ 11839680 (+)
G149602 NA non-coding upstream 234388 11437369 ~ 11437819 (+)
G149595 NA non-coding upstream 303982 11338391 ~ 11368225 (+)
G149591 NA non-coding upstream 345656 11326186 ~ 11326551 (+)
G149587 NA non-coding upstream 449100 11222829 ~ 11223107 (+)
G149572 NA non-coding upstream 496141 11175662 ~ 11176066 (+)
G149666 NA non-coding downstream 112406 11787093 ~ 11791091 (+)
G149667 NA non-coding downstream 117184 11791871 ~ 11792096 (+)
G149668 NA non-coding downstream 118680 11793367 ~ 11794856 (+)
G149672 NA non-coding downstream 122688 11797375 ~ 11798007 (+)
G149673 NA non-coding downstream 124874 11799561 ~ 11799878 (+)
G149525 LOC100846954,LOC107575789 other upstream 1137070 10534590 ~ 10535137 (+)
G149424 NA other upstream 1701406 9969324 ~ 9970801 (+)
AMCG00000281 cpsf2,LOC106608196 other upstream 2081119 9561557 ~ 9591088 (+)
AMCG00000286 sos2 other upstream 2125796 9514822 ~ 9546411 (+)
AMCG00000285 map4k5 other upstream 2185518 9440061 ~ 9486689 (+)
AMCG00000352 NA other downstream 290868 11965555 ~ 11995026 (+)
G149859 NA other downstream 1004983 12679670 ~ 12727903 (+)
AMCG00000381 NA other downstream 1292190 12966877 ~ 13030853 (+)
G150069 NA other downstream 2016152 13690839 ~ 13692589 (+)
AMCG00000412 pgf,LOC102799665,LOC102204058,LOC106593515,LOC106611025 other downstream 2458451 14133138 ~ 14153840 (+)

Expression


Co-expression Network